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Genetics

D-Index
100
Citations
54347
World Ranking
743
National Ranking
371

Overview

Natalia Ivanova is affiliated with Lawrence Berkeley National Laboratory in the United States. Their research focuses on environmental science and biochemistry, genetics, and molecular biology, with notable contributions to subfields such as ecology, molecular biology, plant science, endocrinology, and health, toxicology, and mutagenesis.

The scientist's research explores multiple main topics, including microbial community ecology and physiology, genomics and phylogenetic studies, bacteriophages and microbial interactions, protist diversity and phylogeny, plant virus research studies, legume nitrogen-fixing symbiosis, and RNA and protein synthesis mechanisms.

Natalia Ivanova has frequently published in the following venues:

  • Microbiology Resource Announcements
  • Nucleic Acids Research
  • bioRxiv (Cold Spring Harbor Laboratory)
  • Zenodo (CERN European Organization for Nuclear Research)
  • Frontiers in Microbiology

Selected recent papers include:

  • Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome, 2021, Nature Microbiology
  • The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities, 2020, Nucleic Acids Research
  • IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata, 2022, Nucleic Acids Research
  • IMG/VR v3: an integrated ecological and evolutionary framework for interrogating genomes of uncultivated viruses, 2020, Nucleic Acids Research
  • The IMG/M data management and analysis system v.7: content updates and new features, 2022, Nucleic Acids Research

Frequent collaborators include:

  • Nikos C. Kyrpides
  • T. B. K. Reddy
  • Marcel Huntemann
  • Simon Roux
  • Emiley A. Eloe-Fadrosh

Best Publications

  • Insights into the phylogeny and coding potential of microbial dark matter

    Christian Rinke;Patrick Schwientek;Alexander Sczyrba;Alexander Sczyrba;Natalia N. Ivanova

  • Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

    Robert M. Bowers;Nikos C. Kyrpides;Ramunas Stepanauskas;Miranda Harmon-Smith

  • A Stem Cell Molecular Signature

    Natalia B. Ivanova;John T. Dimos;Christoph Schaniel;Jason A. Hackney

  • Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite.

    Falk Warnecke;Peter Luginbühl;Natalia Ivanova;Majid Ghassemian

  • IMG: the integrated microbial genomes database and comparative analysis system

    Victor M. Markowitz;I-Min A. Chen;Krishna Palaniappan;Ken Chu

  • Dissecting self-renewal in stem cells with RNA interference

    Natalia Ivanova;Radu Dobrin;Rong Lu;Iulia Kotenko

  • IMG ER

    Victor M. Markowitz;Konstantinos Mavromatis;Natalia N. Ivanova;I-Min A. Chen

  • Uncovering Earth’s virome

    David Paez-Espino;Emiley A. Eloe-Fadrosh;Georgios A. Pavlopoulos;Alex D. Thomas

  • A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea.

    Dongying Wu;Dongying Wu;Philip Hugenholtz;Konstantinos Mavromatis;Rüdiger Pukall

  • Visualizing structure and transitions in high-dimensional biological data

    Kevin R Moon;David van Dijk;Zheng Wang;Zheng Wang;Scott Gigante

  • Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis

    Natalia Ivanova;Alexei Sorokin;Iain Anderson;Nathalie Galleron

  • A genomic catalog of Earth’s microbiomes

    Stephen Nayfach;Simon Roux;Rekha Seshadri;Daniel Udwary

  • Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities

    Héctor García Martín;Natalia Ivanova;Victor Kunin;Falk Warnecke

  • IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes.

    I-Min A Chen;Ken Chu;Krishna Palaniappan;Manoj Pillay

  • The Wolbachia genome of Brugia malayi: Endosymbiont evolution within a human pathogenic nematode

    Jeremy Foster;Mehul Ganatra;Ibrahim Kamal;Jennifer Ware

  • The genome sequence of the facultative intracellular pathogen Brucella melitensis

    Vito G. Delvecchio;Vinayak Kapatral;Rajendra J. Redkar;Guy Patra

  • Dissecting biological “dark matter” with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth

    Yann Marcy;Cleber C. Ouverney;Elisabeth M. Bik;Elisabeth M. Bik;Tina Lösekann;Tina Lösekann

  • Microbial species delineation using whole genome sequences

    Neha J. Varghese;Supratim Mukherjee;Natalia Ivanova;Konstantinos T. Konstantinidis

  • The timing of cortical neurogenesis is encoded within lineages of individual progenitor cells

    Qin Shen;Yue Wang;John T Dimos;Christopher A Fasano

  • Distinct lineage specification roles for NANOG, OCT4, and SOX2 in human embryonic stem cells

    Zheng Wang;Efrat Oron;Brynna Nelson;Spiro Razis

Frequent Co-Authors

Nikos C. Kyrpides
Nikos C. Kyrpides Joint Genome Institute
Lynne Goodwin
Lynne Goodwin Los Alamos National Laboratory
Miriam Land
Miriam Land Oak Ridge National Laboratory
Cliff Han
Cliff Han Los Alamos National Laboratory
Jonathan A. Eisen
Jonathan A. Eisen University of California, Davis
Tanja Woyke
Tanja Woyke Joint Genome Institute
John C. Detter
John C. Detter Los Alamos National Laboratory
Loren Hauser
Loren Hauser Digital Infuzion (United States)
Amrita Pati
Amrita Pati Amgen (United States)
Alla Lapidus
Alla Lapidus Saint Petersburg State University

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