H-Index & Metrics Best Publications

H-Index & Metrics

Discipline name H-index Citations Publications World Ranking National Ranking
Genetics and Molecular Biology D-index 82 Citations 32,363 366 World Ranking 922 National Ranking 3

Overview

What is she best known for?

The fields of study she is best known for:

  • Bacteria
  • Gene
  • Genome

The scientist’s investigation covers issues in Genome, Genetics, Gene, Genomics and Whole genome sequencing. Her work deals with themes such as Metagenomics, Phylogenetics and Phylogenetic tree, which intersect with Genome. In her study, which falls under the umbrella issue of Genetics, Bacterial genome size is strongly linked to Computational biology.

In the field of Gene, her study on Plasmid overlaps with subjects such as Prophage and Fungal genetics. Her study on Genomics also encompasses disciplines like

  • Evolutionary biology which connect with Archaea,
  • Genome project together with Reference genome and DNA sequencing,
  • Genome size that intertwine with fields like Wolbachia. Alla Lapidus interconnects Microbiome, Geobacter sulfurreducens and Geobacter, Geobacter metallireducens in the investigation of issues within Whole genome sequencing.

Her most cited work include:

  • The complete genome sequence of the Gram-positive bacterium Bacillus subtilis (3335 citations)
  • A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea. (811 citations)
  • Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis (721 citations)

What are the main themes of her work throughout her whole career to date?

Her primary scientific interests are in Genome, Genetics, Whole genome sequencing, Gene and Bacteria. She studied Genome and Phylogenetic tree that intersect with 16S ribosomal RNA. Her work is dedicated to discovering how Genetics, Type species are connected with Sequence and other disciplines.

The various areas that she examines in her Whole genome sequencing study include Replicon, Strain, Microbiology, Chromosome and Genus. Her Halophile research extends to Gene, which is thematically connected. Alla Lapidus combines subjects such as Nucleic acid sequence and Biochemistry with her study of Bacteria.

She most often published in these fields:

  • Genome (90.89%)
  • Genetics (80.69%)
  • Whole genome sequencing (75.70%)

What were the highlights of her more recent work (between 2015-2021)?

  • Genome (90.89%)
  • Gene (70.50%)
  • Whole genome sequencing (75.70%)

In recent papers she was focusing on the following fields of study:

Alla Lapidus focuses on Genome, Gene, Whole genome sequencing, Genetics and Comparative genomics. Her work in the fields of Genome, such as Genomics, intersects with other areas such as Flavobacteriaceae. As part of one scientific family, she deals mainly with the area of Gene, narrowing it down to issues related to the Computational biology, and often Metagenomics, Transcriptome, Sequence assembly, Reference genome and Sequence analysis.

Her Whole genome sequencing research incorporates elements of Microbiology, Gene cluster, Bacteria, Pseudogene and Type species. Her study in the fields of GC-content, Thermophile and Hydrogenase under the domain of Genetics overlaps with other disciplines such as Desulfurococcus and Energy source. Alla Lapidus works mostly in the field of Comparative genomics, limiting it down to topics relating to Evolutionary biology and, in certain cases, Aspergillus, as a part of the same area of interest.

Between 2015 and 2021, her most popular works were:

  • Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea (512 citations)
  • plasmidSPAdes: assembling plasmids from whole genome sequencing data (253 citations)
  • Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus (228 citations)

In her most recent research, the most cited papers focused on:

  • Bacteria
  • Gene
  • Genome

Alla Lapidus mostly deals with Genome, Gene, Computational biology, Metagenomics and Genetics. Genomics and Whole genome sequencing are the subjects of her Genome studies. Her study in the field of Transcriptome, Plasmid, DNA methylation and Genome evolution is also linked to topics like Quality assessment.

Her study in Computational biology is interdisciplinary in nature, drawing from both Sequence analysis and Sequence assembly. Alla Lapidus has researched Metagenomics in several fields, including Proteomics, Archaea and Carbon cycle, Ecosystem. Alla Lapidus merges Genetics with Fungal genetics in her research.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

The complete genome sequence of the Gram-positive bacterium Bacillus subtilis

F. Kunst;N. Ogasawara;I. Moszer;A. M. Albertini.
Nature (1997)

4340 Citations

A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea.

Dongying Wu;Dongying Wu;Philip Hugenholtz;Konstantinos Mavromatis;Rüdiger Pukall.
Nature (2009)

1011 Citations

Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis

Natalia Ivanova;Alexei Sorokin;Iain Anderson;Nathalie Galleron.
Nature (2003)

935 Citations

Assembling Single-Cell Genomes and Mini-Metagenomes From Chimeric MDA Products

Sergey Nurk;Anton Bankevich;Dmitry Antipov;Alexey A. Gurevich.
Journal of Computational Biology (2013)

795 Citations

The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome.

D. A. Sela;J. Chapman;A. Adeuya;J. H. Kim.
Proceedings of the National Academy of Sciences of the United States of America (2008)

734 Citations

The Wolbachia genome of Brugia malayi: endosymbiont evolution within a human pathogenic nematode.

Jeremy Foster;Mehul Ganatra;Ibrahim Kamal;Jennifer Ware.
PLOS Biology (2005)

649 Citations

Genome sequencing reveals complex secondary metabolome in the marine actinomycete Salinispora tropica

Daniel W. Udwary;Lisa Zeigler;Ratnakar Asolkar;Vasanth Singan.
Proceedings of the National Academy of Sciences of the United States of America (2007)

644 Citations

Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilus

Alexander Bolotin;Benoît Quinquis;Pierre Renault;Alexei Sorokin.
Nature Biotechnology (2004)

557 Citations

Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000

Helene Feil;William S. Feil;Patrick Chain;Frank Larimer.
Proceedings of the National Academy of Sciences of the United States of America (2005)

551 Citations

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

Robert M. Bowers;Nikos C. Kyrpides;Ramunas Stepanauskas;Miranda Harmon-Smith.
Nature Biotechnology (2018)

540 Citations

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