World's Best Scientists 2026 revealed!

D-Index & Metrics

Genetics

D-Index
67
Citations
25402
World Ranking
2495
National Ranking
316

Overview

Simon Andrews is affiliated with the Babraham Institute in the United Kingdom and has contributed to several fields of scientific research spanning biochemistry, genetics, molecular biology, and computer science. Their work bridges both biological sciences and technology-focused domains, reflecting an interdisciplinary approach to research.

Andrews has published research in important venues such as Reproduction and Design for Health. Their publications have focused on areas including reproductive biology, epigenetics, human-computer interaction, and public health.

Two recent papers illustrate the scope of their research interests:

  • Single-cell multiomic analysis reveals methylome and transcriptome deviations following oocyte maturation in vitro, 2025, Reproduction
  • Human-centred design research during the pandemic: using an online survey to inform personas of women at risk of hip fracture, 2023, Design for Health

The first study addresses molecular and epigenetic changes during oocyte maturation, combining multiomic techniques to analyze methylome and transcriptome alterations. The second paper explores human-centred design by creating personas to understand the risk factors affecting women prone to hip fractures, emphasizing the use of online survey methodologies during the pandemic.

Andrews frequently collaborates with a range of researchers including Camilla Benedetti, Carlo Giaccari, Francesco Cecere, Yannick Gansemans, and Gavin Kelsey. Such partnerships support a cross-disciplinary approach within both the life sciences and technology domains.

Their primary fields of study include:

  • Biochemistry, Genetics and Molecular Biology
  • Computer Science

Within these broader disciplines, their subfields extend to:

  • Human-Computer Interaction
  • Public Health, Environmental and Occupational Health
  • Molecular Biology
  • Genetics
  • Demography

The main topics explored in their work reflect a combination of biological and technological themes:

  • Reproductive Biology and Fertility
  • Epigenetics and DNA Methylation
  • Genetic Syndromes and Imprinting
  • Persona Design and Applications
  • Innovative Human-Technology Interaction
  • Technology Use by Older Adults

This overview demonstrates Simon Andrews's engagement at the intersection of molecular biology and computational methods with applications in public health and user-centered design.

Best Publications

  • Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.

    Felix Krueger;Simon R. Andrews

  • Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation

    Gabriella Ficz;Miguel R. Branco;Stefanie Seisenberger;Fátima Santos

  • Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity

    Sébastien A Smallwood;Heather J Lee;Heather J Lee;Christof Angermueller;Felix Krueger

  • FastQ Screen: A tool for multi-genome mapping and quality control

    Steven W. Wingett;Simon Andrews

  • Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C

    Borbala Mifsud;Filipe Tavares-Cadete;Alice N Young;Robert Sugar

  • Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by Aid deficiency

    Christian Popp;Wendy Dean;Suhua Feng;Shawn J. Cokus

  • The Dynamics of Genome-wide DNA Methylation Reprogramming in Mouse Primordial Germ Cells

    Stefanie Seisenberger;Simon Andrews;Felix Krueger;Julia Arand

  • Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells

    Stefan Schoenfelder;Tom Sexton;Lyubomira Chakalova;Nathan F Cope

  • Dynamic CpG island methylation landscape in oocytes and preimplantation embryos

    Sébastien A Smallwood;Shin-ichi Tomizawa;Felix Krueger;Nico Ruf

  • HiCUP: pipeline for mapping and processing Hi-C data

    Steven Wingett;Philip Ewels;Mayra Furlan-Magaril;Takashi Nagano

  • The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements

    Stefan Schoenfelder;Mayra Furlan-Magaril;Borbala Mifsud;Filipe Tavares-Cadete;Filipe Tavares-Cadete

  • FGF Signaling Inhibition in ESCs Drives Rapid Genome-wide Demethylation to the Epigenetic Ground State of Pluripotency

    Gabriella Ficz;Timothy A. Hore;Fátima Santos;Heather J. Lee

  • Global Mapping of DNA Methylation in Mouse Promoters Reveals Epigenetic Reprogramming of Pluripotency Genes

    Cassandra R. Farthing;Gabriella Ficz;Ray Kit Ng;Chun-Fung Chan

  • DNA methylome analysis using short bisulfite sequencing data

    Felix Krueger;Benjamin Kreck;Andre Franke;Simon R Andrews

  • Polycomb repressive complex PRC1 spatially constrains the mouse embryonic stem cell genome

    Stefan Schoenfelder;Robert Sugar;Andrew Dimond;Biola-Maria Javierre

  • A screen for hydroxymethylcytosine and formylcytosine binding proteins suggests functions in transcription and chromatin regulation

    Mario Iurlaro;Gabriella Ficz;David Oxley;Eun-Ang Raiber

  • Global Reorganization of the Nuclear Landscape in Senescent Cells

    Tamir Chandra;Tamir Chandra;Philip Andrew Ewels;Stefan Schoenfelder;Mayra Furlan-Magaril

  • PI(3)Kgamma has an important context-dependent role in neutrophil chemokinesis

    G John Ferguson;Laura Milne;Suhasini Kulkarni;Takehiko Sasaki

  • Unbiased analysis of potential targets of breast cancer susceptibility loci by Capture Hi-C

    Nicola H. Dryden;Laura R. Broome;Frank Dudbridge;Nichola Johnson

  • Dynamic stage-specific changes in imprinted differentially methylated regions during early mammalian development and prevalence of non-CpG methylation in oocytes

    Shin Ichi Tomizawa;Hisato Kobayashi;Hisato Kobayashi;Toshiaki Watanabe;Toshiaki Watanabe;Simon Andrews

Frequent Co-Authors

Wolf Reik
Wolf Reik Babraham Institute
Gavin Kelsey
Gavin Kelsey Babraham Institute
Peter Fraser
Peter Fraser Florida State University
Wendy Dean
Wendy Dean Babraham Institute
Len R. Stephens
Len R. Stephens Babraham Institute
Phillip T. Hawkins
Phillip T. Hawkins Babraham Institute
Martin R. Turner
Martin R. Turner University of Oxford
Myriam Hemberger
Myriam Hemberger University of Calgary
Michael P. Coleman
Michael P. Coleman University of Cambridge
Simon J. Cook
Simon J. Cook Babraham Institute

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