World's Best Scientists 2026 revealed!

D-Index & Metrics

Computer Science

D-Index
34
Citations
5192
World Ranking
12139
National Ranking
601

Overview

Monika Heiner is affiliated with Brandenburg University of Technology in Germany. Their research primarily spans the fields of Biochemistry, Genetics and Molecular Biology, and Medicine, with more focused work in Molecular Biology, Pulmonary and Respiratory Medicine, and Surgery. Additionally, they have contributed to studies in Management Science and Operations Research as well as Computational Theory and Mathematics.

The scientist's research interests include several core topics such as Gene Regulatory Network Analysis, Neonatal Respiratory Health Research, Congenital Diaphragmatic Hernia Studies, Respiratory Support and Mechanisms, DNA and Biological Computing, Microbial Metabolic Engineering and Bioproduction, and Bioinformatics and Genomic Networks.

Monika Heiner has published extensively in journals and venues notable in the life sciences and computational biology domains. Frequent publication venues include bioRxiv (Cold Spring Harbor Laboratory), SSRN Electronic Journal, Briefings in Bioinformatics, Biosystems, and Stem Cells.

  • Fei Liu
  • Susanne Herold
  • Ana Ivonne Vazquez-Armendariz
  • George Assaf
  • Savério Bellusci

Their recent papers reflect a focus on lung development, pulmonary cell biology, and computational approaches to biological systems. Key recent publications are:

  • Multilineage murine stem cells generate complex organoids to model distal lung development and disease, 2020, The EMBO Journal
  • Identification of a novel subset of alveolar type 2 cells enriched in PD-L1 and expanded following pneumonectomy, 2021, European Respiratory Journal
  • Characterization in Mice of the Resident Mesenchymal Niche Maintaining At2 Stem Cell Proliferation in Homeostasis and Disease, 2021, Stem Cells
  • Alveolar macrophage-expressed Plet1 is a driver of lung epithelial repair after viral pneumonia, 2024, Nature Communications
  • Hybrid modelling of biological systems: current progress and future prospects, 2022, Briefings in Bioinformatics

Best Publications

  • Petri nets for systems and synthetic biology

    Monika Heiner;David Gilbert;Robin Donaldson

  • Snoopy --- a unifying petri net tool

    Monika Heiner;Mostafa Herajy;Fei Liu;Christian Rohr

  • Intronic CA-repeat and CA-rich elements: a new class of regulators of mammalian alternative splicing.

    Jingyi Hui;Lee-Hsueh Hung;Monika Heiner;Silke Schreiner

  • Application of Petri net based analysis techniques to signal transduction pathways

    Andrea Sackmann;Monika Heiner;Ina Koch

  • Model validation of biological pathways using Petri nets--demonstrated for apoptosis.

    Monika Heiner;Ina Koch;Jürgen Will

  • Snoopy - a unifying Petri net framework to investigate biomolecular networks

    Christian Rohr;Christian Rohr;Christian Rohr;Wolfgang Marwan;Wolfgang Marwan;Monika Heiner

  • Application of Petri net theory for modelling and validation of the sucrose breakdown pathway in the potato tuber

    Ina Koch;Björn H. Junker;Monika Heiner

  • Diverse roles of hnRNP L in mammalian mRNA processing: A combined microarray and RNAi analysis

    Lee-Hsueh Hung;Monika Heiner;Jingyi Hui;Silke Schreiner

  • Steady State Analysis of Metabolic Pathways Using Petri Nets

    Klaus Voss;Monika Heiner;Ina Koch

  • From petri nets to differential equations – an integrative approach for biochemical network analysis

    David Gilbert;Monika Heiner

  • Petri net based model validation in systems biology

    Monika Heiner;Ina Koch

  • A unifying framework for modelling and analysing biochemical pathways using Petri nets

    David Gilbert;Monika Heiner;Sebastian Lehrack

  • Modularization of biochemical networks based on classification of Petri net t-invariants

    Eva Grafahrend-Belau;Falk Schreiber;Monika Heiner;Andrea Sackmann

  • A structured approach for the engineering of biochemical network models, illustrated for signalling pathways

    Rainer Breitling;David R. Gilbert;Monika Heiner;Richard J. Orton

  • MARCIE: model checking and reachability analysis done efficiently

    Monika Heiner;Christian Rohr;Martin Schwarick

  • Hybrid representation and simulation of stiff biochemical networks

    Mostafa Herajy;Monika Heiner

  • Petri nets in Snoopy: a unifying framework for the graphical display, computational modelling, and simulation of bacterial regulatory networks.

    Wolfgang Marwan;Christian Rohr;Monika Heiner

  • Time Petri Nets for Modelling and Analysis of Biochemical Networks

    Louchka Popova-Zeugmann;Monika Heiner;Ina Koch

  • Formal Techniques for Networked and Distributed Systems - FORTE 2003

    Hartmut König;Monika Heiner;Adam Wolisz

  • Charlie – An Extensible Petri Net Analysis Tool

    Monika Heiner;Martin Schwarick;Jan-Thierry Wegener

  • Model Validation of Biological Pathways Using Petri Nets - Demonstrated for Apoptosis

    Monika Heiner;Ina Koch;Jürgen Will

Frequent Co-Authors

David Gilbert
David Gilbert Brunel University London
Ina Koch
Ina Koch Goethe University Frankfurt
Rainer Breitling
Rainer Breitling University of Manchester
Saverio Bellusci
Saverio Bellusci University of Giessen
Susanne Herold
Susanne Herold University of Giessen
Albrecht Bindereif
Albrecht Bindereif University of Giessen
Corrado Priami
Corrado Priami University of Pisa
Fred Schaper
Fred Schaper Otto-von-Guericke University Magdeburg
Stephen J. Powers
Stephen J. Powers Rothamsted Research
Adam Wolisz
Adam Wolisz Technical University of Berlin

If you think any of the details on this page are incorrect, let us know.

Report an issue

We appreciate your kind effort to assist us to improve this page, it would be helpful providing us with as much detail as possible in the text box below:

Related Online Degrees & Career Pathways

Exploring related online degrees can expand your career opportunities in the computer science field. For example, earning an online master’s in electrical engineering degree is a valuable path for students interested in hardware, robotics, or communications. This advanced qualification opens doors to high-paying engineering roles and leadership opportunities in tech industries.

Not all career progress requires a full degree. There are 3-month certificate programs that pay well in the tech sector. These quick certifications can lead to jobs in cybersecurity, data analysis, or network administration, offering strong salaries and flexible entry points.

For those looking to upskill fast, the quickest masters degree online options allow you to earn a respected credential in just one year. Computer science and related disciplines often offer accelerated tracks that help you advance your career without a lengthy time commitment.

Lastly, choosing which master's degree is most in demand in usa can help you stay ahead in the job market. Degrees in areas like artificial intelligence, cybersecurity, and data science are consistently sought after by top employers, making them worthwhile investments for your future.

Best Scientists Citing Monika Heiner

Trending Scientists