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Computer Science

D-Index
31
Citations
4857
World Ranking
13550
National Ranking
653

Overview

Ina Koch is a researcher affiliated with Goethe University Frankfurt in Germany. Their academic work primarily focuses on Medicine and Biochemistry, Genetics and Molecular Biology, with significant contributions spanning 68 and 48 publications respectively.

Their subfields of study include Molecular Biology, Radiology, Nuclear Medicine and Imaging, Biomedical Engineering, Oncology, and Pulmonary and Respiratory Medicine. This interdisciplinary approach is reflected in their research topics, which cover:

  • Radiomics and Machine Learning in Medical Imaging
  • Advanced X-ray and CT Imaging
  • Bioinformatics and Genomic Networks
  • AI in cancer detection
  • Gene Regulatory Network Analysis
  • Cell Image Analysis Techniques
  • Medical Imaging Techniques and Applications

Ina Koch has published multiple papers in well-recognized scientific venues. Frequent publication venues include Biological Chemistry, bioRxiv (Cold Spring Harbor Laboratory), Scientific Reports, Journal of Thoracic Oncology, and Biosystems. The number of publications in these venues ranges from two to four, indicating an active engagement with these journals.

Some of the recent publications authored or coauthored by Ina Koch are:

  • Comparison of machine learning algorithms to predict clinically significant prostate cancer of the peripheral zone with multiparametric MRI using clinical assessment categories and radiomic features, 2020, European Radiology
  • Impact of rescanning and repositioning on radiomic features employing a multi-object phantom in magnetic resonance imaging, 2021, Scientific Reports
  • Variation of butyrate production in the gut microbiome in type 2 diabetes patients, 2023, International Microbiology
  • Evaluation of automatic discrimination between benign and malignant prostate tissue in the era of high precision digital pathology, 2023, BMC Bioinformatics
  • CT-radiomics and clinical risk scores for response and overall survival prognostication in TACE HCC patients, 2023, Scientific Reports

Their collaborations include frequent coauthors such as Jörg Ackermann, Thomas J. Vogl, Simon S. Martin, Simon Bernatz, and İbrahim Yel. These partnerships indicate a strong collaborative network across multiple areas of biomedical research.

Best Publications

  • Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)

    Daniel J. Klionsky;Amal Kamal Abdel-Aziz;Sara Abdelfatah;Mahmoud Abdellatif

  • Complexome Profiling Identifies TMEM126B as a Component of the Mitochondrial Complex I Assembly Complex

    Heinrich Heide;Lea Bleier;Mirco Steger;Jörg Ackermann

  • Enumerating all connected maximal common subgraphs in two graphs

    Ina Koch

  • Increase of functional diversity by alternative splicing.

    Evgenia V. Kriventseva;Ina Koch;Rolf Apweiler;Martin Vingron

  • Exploring the pathway structure of metabolism: decomposition into subnetworks and application to Mycoplasma pneumoniae

    Stefan Schuster;Thomas Pfeiffer;Ferdinand Moldenhauer;Ina Koch

  • Application of Petri net based analysis techniques to signal transduction pathways

    Andrea Sackmann;Monika Heiner;Ina Koch

  • Erratum to: Next-generation sequencing reveals novel differentially regulated mRNAs, lncRNAs, miRNAs, sdRNAs and a piRNA in pancreatic cancer.

    Sören Müller;Susanne Raulefs;Philipp Bruns;Fabian Afonso-Grunz

  • Model validation of biological pathways using Petri nets--demonstrated for apoptosis.

    Monika Heiner;Ina Koch;Jürgen Will

  • Application of Petri net theory for modelling and validation of the sucrose breakdown pathway in the potato tuber

    Ina Koch;Björn H. Junker;Monika Heiner

  • An Algorithm for Finding Maximal Common Subtopologies in a Set of Protein Structures

    Ina Koch;Thomas Lengauer;Egon Wanke

  • Steady State Analysis of Metabolic Pathways Using Petri Nets

    Klaus Voss;Monika Heiner;Ina Koch

  • Petri net based model validation in systems biology

    Monika Heiner;Ina Koch

  • Modeling in Systems Biology: The Petri Net Approach

    Ina Koch;Wolfgang Reisig;Falk Schreiber

  • Modularization of biochemical networks based on classification of Petri net t-invariants

    Eva Grafahrend-Belau;Falk Schreiber;Monika Heiner;Andrea Sackmann

  • Petri net modelling of gene regulation of the Duchenne muscular dystrophy.

    Stefanie Grunwald;Astrid Speer;Jörg Ackermann;Ina Koch

  • APADB: a database for alternative polyadenylation and microRNA regulation events

    Sören Müller;Lukas Rycak;Fabian Afonso-Grunz;Peter Winter

  • NOVA: a software to analyze complexome profiling data.

    Heiko Giese;Jörg Ackermann;Heinrich Heide;Lea Bleier

  • Analysis of protein sheet topologies by graph theoretical methods

    Ina Koch;Frieder Kaden;Joachim Selbig

  • An analysis of the Petri net based model of the human body iron homeostasis process

    Andrea Sackmann;Dorota Formanowicz;Piotr Formanowicz;Ina Koch

  • omiRas: a Web server for differential expression analysis of miRNAs derived from small RNA-Seq data

    Sören Müller;Lukas Rycak;Peter Winter;Günter Kahl

  • Whither Systems Medicine

    Rolf Apweiler;Tim Beissbarth;Michael R. Berthold;Nils Blüthgen

  • Model Validation of Biological Pathways Using Petri Nets - Demonstrated for Apoptosis

    Monika Heiner;Ina Koch;Jürgen Will

Frequent Co-Authors

Monika Heiner
Monika Heiner Brandenburg University of Technology
Heinz D. Osiewacz
Heinz D. Osiewacz Goethe University Frankfurt
Stefan Schuster
Stefan Schuster Friedrich Schiller University Jena
Christine M. Freitag
Christine M. Freitag Goethe University Frankfurt
Stefan Herms
Stefan Herms University of Basel
Ulrich Brandt
Ulrich Brandt Radboud University
Ilka Wittig
Ilka Wittig Goethe University Frankfurt
Sven Cichon
Sven Cichon University of Basel
Simone Fulda
Simone Fulda Goethe University Frankfurt
Jan O. Korbel
Jan O. Korbel European Molecular Biology Laboratory

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