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Claudine Chaouiya

Claudine Chaouiya

D-Index & Metrics

Discipline name D-Index World Ranking Current World Ranking National Ranking Current National Ranking Publications Citations
Computer Science 36 11119 10804 272 265 90 6728

Claudine Chaouiya publications per year

The chart shows the history of publications by Claudine Chaouiya between 1992 and 2025, highlighting the no. of papers published in each year and offering an overview of the publication velocity of this scholar. Claudine Chaouiya published across 34 years, from 1992 to 2025, averaging 3.9 papers a year. Output peaked at 26 publications in 2023. 6 of the 133 publications appeared in the last two years.

No. of publications
5 10 15 20 25
Bar chart. Horizontal axis: year, 1992 to 2025. Vertical axis: number of publications, 0 to 26. Peak 26 publications in 2023. 1992: 1 publication 1993: 1 publication 1994: 0 publications 1995: 0 publications 1996: 0 publications 1997: 1 publication 1998: 0 publications 1999: 0 publications 2000: 1 publication 2001: 0 publications 2002: 0 publications 2003: 2 publications 2004: 1 publication 2005: 2 publications 2006: 7 publications 2007: 3 publications 2008: 4 publications 2009: 5 publications 2010: 5 publications 2011: 7 publications 2012: 7 publications 2013: 10 publications 2014: 7 publications 2015: 5 publications 2016: 2 publications 2017: 1 publication 2018: 13 publications 2019: 3 publications 2020: 4 publications 2021: 6 publications 2022: 3 publications 2023: 26 publications 2024: 4 publications 2025: 2 publications
1992 2025

133 publications in total across all disciplines

View publications per year as a table
Claudine Chaouiya: publications per year, 1992 to 2025
Year Publications
1992 1
1993 1
1994 0
1995 0
1996 0
1997 1
1998 0
1999 0
2000 1
2001 0
2002 0
2003 2
2004 1
2005 2
2006 7
2007 3
2008 4
2009 5
2010 5
2011 7
2012 7
2013 10
2014 7
2015 5
2016 2
2017 1
2018 13
2019 3
2020 4
2021 6
2022 3
2023 26
2024 4
2025 2
Total 133
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Claudine Chaouiya publication distribution in Computer Science in 2026

The chart shows the distribution of publications by all Research.com ranked scientists in the field of Computer Science in 2026. The highlighted bar marks where Claudine Chaouiya sits on this spectrum.

No. of scientists
200 400 600
Bar chart with 97 bars. Horizontal axis: publications, 32–41 to 991+. Vertical axis: number of scientists, 0 to 609. Most scientists, 609, have 142–151 publications. The last bar groups every scientist with 991 publications or more. The highlighted bar, 82–91 publications, is where this scientist sits. 32–41 publications: 7 scientists 42–51 publications: 22 scientists 52–61 publications: 82 scientists 62–71 publications: 134 scientists 72–81 publications: 249 scientists 82–91 publications: 324 scientists 92–101 publications: 421 scientists 102–111 publications: 420 scientists 112–121 publications: 497 scientists 122–131 publications: 544 scientists 132–141 publications: 555 scientists 142–151 publications: 609 scientists 152–161 publications: 559 scientists 162–171 publications: 534 scientists 172–181 publications: 556 scientists 182–191 publications: 583 scientists 192–201 publications: 519 scientists 202–211 publications: 508 scientists 212–221 publications: 490 scientists 222–231 publications: 437 scientists 232–241 publications: 423 scientists 242–251 publications: 408 scientists 252–261 publications: 377 scientists 262–271 publications: 301 scientists 272–281 publications: 335 scientists 282–291 publications: 320 scientists 292–301 publications: 293 scientists 302–311 publications: 250 scientists 312–321 publications: 238 scientists 322–331 publications: 206 scientists 332–341 publications: 209 scientists 342–351 publications: 208 scientists 352–361 publications: 162 scientists 362–371 publications: 176 scientists 372–381 publications: 127 scientists 382–391 publications: 158 scientists 392–401 publications: 128 scientists 402–411 publications: 104 scientists 412–421 publications: 94 scientists 422–431 publications: 99 scientists 432–441 publications: 83 scientists 442–451 publications: 108 scientists 452–461 publications: 73 scientists 462–471 publications: 77 scientists 472–481 publications: 69 scientists 482–491 publications: 84 scientists 492–501 publications: 62 scientists 502–511 publications: 54 scientists 512–521 publications: 57 scientists 522–531 publications: 51 scientists 532–541 publications: 51 scientists 542–551 publications: 32 scientists 552–561 publications: 38 scientists 562–571 publications: 28 scientists 572–581 publications: 43 scientists 582–591 publications: 33 scientists 592–601 publications: 41 scientists 602–611 publications: 32 scientists 612–621 publications: 28 scientists 622–631 publications: 25 scientists 632–641 publications: 27 scientists 642–651 publications: 17 scientists 652–661 publications: 20 scientists 662–671 publications: 17 scientists 672–681 publications: 15 scientists 682–691 publications: 14 scientists 692–701 publications: 21 scientists 702–711 publications: 13 scientists 712–721 publications: 12 scientists 722–731 publications: 19 scientists 732–741 publications: 14 scientists 742–751 publications: 12 scientists 752–761 publications: 10 scientists 762–771 publications: 10 scientists 772–781 publications: 11 scientists 782–791 publications: 10 scientists 792–801 publications: 11 scientists 802–811 publications: 8 scientists 812–821 publications: 8 scientists 822–831 publications: 7 scientists 832–841 publications: 11 scientists 842–851 publications: 10 scientists 852–861 publications: 5 scientists 862–871 publications: 9 scientists 872–881 publications: 4 scientists 882–891 publications: 6 scientists 892–901 publications: 3 scientists 902–911 publications: 6 scientists 912–921 publications: 3 scientists 922–931 publications: 2 scientists 932–941 publications: 2 scientists 942–951 publications: 2 scientists 952–961 publications: 3 scientists 962–971 publications: 3 scientists 972–981 publications: 3 scientists 982–990 publications: 5 scientists 991+ publications: 100 scientists
32–41 publications 991+

This scientist: 90 publications — 6th percentile

6% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 991 publications or more.

View publications distribution as a table
Number of Computer Science scientists by publication count, Research.com 2026 ranking edition. Based on 14,188 ranked scientists.
Publications Scientists This scientist
32–41 7
42–51 22
52–61 82
62–71 134
72–81 249
82–91 324 90
92–101 421
102–111 420
112–121 497
122–131 544
132–141 555
142–151 609
152–161 559
162–171 534
172–181 556
182–191 583
192–201 519
202–211 508
212–221 490
222–231 437
232–241 423
242–251 408
252–261 377
262–271 301
272–281 335
282–291 320
292–301 293
302–311 250
312–321 238
322–331 206
332–341 209
342–351 208
352–361 162
362–371 176
372–381 127
382–391 158
392–401 128
402–411 104
412–421 94
422–431 99
432–441 83
442–451 108
452–461 73
462–471 77
472–481 69
482–491 84
492–501 62
502–511 54
512–521 57
522–531 51
532–541 51
542–551 32
552–561 38
562–571 28
572–581 43
582–591 33
592–601 41
602–611 32
612–621 28
622–631 25
632–641 27
642–651 17
652–661 20
662–671 17
672–681 15
682–691 14
692–701 21
702–711 13
712–721 12
722–731 19
732–741 14
742–751 12
752–761 10
762–771 10
772–781 11
782–791 10
792–801 11
802–811 8
812–821 8
822–831 7
832–841 11
842–851 10
852–861 5
862–871 9
872–881 4
882–891 6
892–901 3
902–911 6
912–921 3
922–931 2
932–941 2
942–951 2
952–961 3
962–971 3
972–981 3
982–990 5
991+ 100
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Claudine Chaouiya D-index placement in Computer Science in 2026

The chart shows the D-index (discipline H-index) distribution of Computer Science scientists ranked by Research.com in 2026. The highlighted bar marks where Claudine Chaouiya sits on this spectrum.

No. of scientists
200 400 600 800
Bar chart with 52 bars. Horizontal axis: D-Index, 30–31 to 131+. Vertical axis: number of scientists, 0 to 990. Most scientists, 990, have 36–37 D-Index. The last bar groups every scientist with 131 D-Index or more. The highlighted bar, 36–37 D-Index, is where this scientist sits. 30–31 D-Index: 879 scientists 32–33 D-Index: 983 scientists 34–35 D-Index: 918 scientists 36–37 D-Index: 990 scientists 38–39 D-Index: 968 scientists 40–41 D-Index: 907 scientists 42–43 D-Index: 821 scientists 44–45 D-Index: 763 scientists 46–47 D-Index: 689 scientists 48–49 D-Index: 543 scientists 50–51 D-Index: 543 scientists 52–53 D-Index: 518 scientists 54–55 D-Index: 500 scientists 56–57 D-Index: 458 scientists 58–59 D-Index: 400 scientists 60–61 D-Index: 337 scientists 62–63 D-Index: 308 scientists 64–65 D-Index: 292 scientists 66–67 D-Index: 249 scientists 68–69 D-Index: 213 scientists 70–71 D-Index: 192 scientists 72–73 D-Index: 189 scientists 74–75 D-Index: 165 scientists 76–77 D-Index: 139 scientists 78–79 D-Index: 119 scientists 80–81 D-Index: 121 scientists 82–83 D-Index: 113 scientists 84–85 D-Index: 88 scientists 86–87 D-Index: 87 scientists 88–89 D-Index: 75 scientists 90–91 D-Index: 69 scientists 92–93 D-Index: 57 scientists 94–95 D-Index: 46 scientists 96–97 D-Index: 38 scientists 98–99 D-Index: 34 scientists 100–101 D-Index: 36 scientists 102–103 D-Index: 27 scientists 104–105 D-Index: 37 scientists 106–107 D-Index: 18 scientists 108–109 D-Index: 31 scientists 110–111 D-Index: 19 scientists 112–113 D-Index: 16 scientists 114–115 D-Index: 12 scientists 116–117 D-Index: 20 scientists 118–119 D-Index: 15 scientists 120–121 D-Index: 5 scientists 122–123 D-Index: 20 scientists 124–125 D-Index: 8 scientists 126–127 D-Index: 5 scientists 128–129 D-Index: 7 scientists 130 D-Index: 3 scientists 131+ D-Index: 98 scientists
30–31 D-Index 131+

This scientist: 36 D-Index — 23rd percentile

23% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 131 D-Index or more.

View D-Index distribution as a table
Number of Computer Science scientists by D-index, Research.com 2026 ranking edition. Based on 14,188 ranked scientists.
D-Index Scientists This scientist
30–31 879
32–33 983
34–35 918
36–37 990 36
38–39 968
40–41 907
42–43 821
44–45 763
46–47 689
48–49 543
50–51 543
52–53 518
54–55 500
56–57 458
58–59 400
60–61 337
62–63 308
64–65 292
66–67 249
68–69 213
70–71 192
72–73 189
74–75 165
76–77 139
78–79 119
80–81 121
82–83 113
84–85 88
86–87 87
88–89 75
90–91 69
92–93 57
94–95 46
96–97 38
98–99 34
100–101 36
102–103 27
104–105 37
106–107 18
108–109 31
110–111 19
112–113 16
114–115 12
116–117 20
118–119 15
120–121 5
122–123 20
124–125 8
126–127 5
128–129 7
130 3
131+ 98
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Overview

Claudine Chaouiya is affiliated with the Instituto Gulbenkian de Ciência in Portugal. Their research focuses on areas within biochemistry, genetics, and molecular biology, with an emphasis on molecular biology. They have contributed extensively to several subfields including computational theory and mathematics, biomedical engineering, cell biology, and cancer research.

The scientist's work covers a number of main topics, notably gene regulatory network analysis, bioinformatics and genomic networks, microbial metabolic engineering and bioproduction, fungal and yeast genetics research, biofuel production and bioconversion, cancer genomics and diagnostics, as well as formal methods in verification. These research themes are reflected in their publications and collaborations.

Claudine Chaouiya has published research in multiple venues, with frequent appearances in Bioinformatics, Briefings in Bioinformatics, and Peer Community In Mathematical and Computational Biology. Other venues include Molecular Systems Biology and Nucleic Acids Research.

Their recent notable papers include:

  • SBML Level 3: an extensible format for the exchange and reuse of biological models, 2020, Molecular Systems Biology
  • YEASTRACT+: a portal for the exploitation of global transcription regulation and metabolic model data in yeast biotechnology and pathogenesis, 2022, Nucleic Acids Research
  • Hybrid Epithelial-Mesenchymal Phenotypes Are Controlled by Microenvironmental Factors, 2020, Cancer Research
  • Setting the basis of best practices and standards for curation and annotation of logical models in biology-highlights of the [BC]2 2019 CoLoMoTo/SysMod Workshop, 2020, Briefings in Bioinformatics
  • Addressing barriers in comprehensiveness, accessibility, reusability, interoperability and reproducibility of computational models in systems biology, 2022, Briefings in Bioinformatics

Frequent co-authors of Claudine Chaouiya include:

  • Tomáš Helikar
  • Pedro T. Monteiro
  • Anna Niarakis
  • Julio Sáez-Rodríguez
  • Laurence Calzone

Best Publications

  • Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle

    Adrien Fauré;Aurélien Naldi;Claudine Chaouiya;Denis Thieffry

  • Petri net modelling of biological networks

    Claudine Chaouiya

  • Modeling ERBB receptor-regulated G1/S transition to find novel targets for de novo trastuzumab resistance

    Özgür Sahin;Holger Fröhlich;Christian Löbke;Ulrike Korf

  • SBML Level 3: an extensible format for the exchange and reuse of biological models

    Sarah M. Keating;Sarah M. Keating;Dagmar Waltemath;Matthias König;Fengkai Zhang

  • Logical Modeling and Dynamical Analysis of Cellular Networks.

    Wassim Abou-Jaoudé;Pauline Traynard;Pedro T. Monteiro;Pedro T. Monteiro;Julio Saez-Rodriguez

  • The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core.

    Michael Hucka;Frank T. Bergmann;Claudine Chaouiya;Andreas Dräger

  • GINsim: A software suite for the qualitative modelling, simulation and analysis of regulatory networks

    A. Gonzalez Gonzalez;A. Naldi;L. Sánchez;D. Thieffry

  • Logical modelling of regulatory networks with GINsim 2.3

    Aurélien Naldi;Duncan Bérenguier;Adrien Fauré;F. Lopez

  • Diversity and plasticity of Th cell types predicted from regulatory network modelling.

    Aurélien Naldi;Jorge Carneiro;Claudine Chaouiya;Denis Thieffry

  • SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools.

    Claudine Chaouiya;Duncan Bérenguier;Sarah M. Keating;Aurélien Naldi

  • Logical modelling of gene regulatory networks with GINsim.

    Claudine Chaouiya;Aurélien Naldi;Denis Thieffry

  • Large-scale generation of computational models from biochemical pathway maps

    Finja Büchel;Nicolas Rodriguez;Neil Swainston;Clemens Wrzodek

  • Path2Models: large-scale generation of computational models from biochemical pathway maps

    Finja Buchel;Finja Buchel;Nicolas Rodriguez;Nicolas Rodriguez;Neil Swainston;Clemens Wrzodek

  • Dynamically consistent reduction of logical regulatory graphs

    Aurélien Naldi;Elisabeth Remy;Denis Thieffry;Claudine Chaouiya

  • Decision diagrams for the representation and analysis of logical models of genetic networks

    Aurélien Naldi;Denis Thieffry;Claudine Chaouiya

  • Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in E.Coli

    E. Simão;E. Remy;D. Thieffry;C. Chaouiya

  • Petri net modelling of biological regulatory networks

    Claudine Chaouiya;Elisabeth Remy;Denis Thieffry

  • The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks

    Aurélien Naldi;Céline Hernandez;Nicolas Levy;Gautier Stoll

  • Qualitative Analysis of Regulatory Graphs: A Computational Tool Based on a Discrete Formal Framework.

    Claudine Chaouiya;Elisabeth Remy;Brigitte Mosse;Denis Thieffry

  • Qualitative Modelling of Genetic Networks: From Logical Regulatory Graphs to Standard Petri Nets

    Claudine Chaouiya;Elisabeth Remy;Paul Ruet;Denis Thieffry

  • A description of dynamical graphs associated to elementary regulatory circuits.

    Elisabeth Remy;Brigitte Mossé;Claudine Chaouiya;Denis Thieffry

  • Logical Modeling and Analysis of Cellular Regulatory Networks With GINsim 3.0.

    Aurélien Naldi;Céline Hernandez;Wassim Abou-Jaoudé;Pedro Tiago Monteiro

Frequent Co-Authors

Denis Thieffry
Denis Thieffry École Normale Supérieure
Julio Saez-Rodriguez
Julio Saez-Rodriguez Heidelberg University
Nicolas Le Novère
Nicolas Le Novère Babraham Institute
Laurence Calzone
Laurence Calzone PSL University
Michael Hucka
Michael Hucka California Institute of Technology
Falk Schreiber
Falk Schreiber University of Konstanz
Henning Hermjakob
Henning Hermjakob European Bioinformatics Institute
Ioannis Xenarios
Ioannis Xenarios University of Lausanne
Andrei Zinovyev
Andrei Zinovyev Institute Curie
Hidde de Jong
Hidde de Jong French Institute for Research in Computer Science and Automation - INRIA

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