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Matthew P. Jacobson

D-Index & Metrics

Biology and Biochemistry

D-Index
78
Citations
31174
World Ranking
4459
National Ranking
2166

Matthew P. Jacobson publication distribution in Biology and Biochemistry in 2026

The chart shows the distribution of publications by all Research.com ranked scientists in the field of Biology and Biochemistry in 2026. The highlighted bar marks where Matthew P. Jacobson sits on this spectrum.

47–56 publications: 8 scientists 57–66 publications: 35 scientists 67–76 publications: 106 scientists 77–86 publications: 231 scientists 87–96 publications: 414 scientists 97–106 publications: 546 scientists 107–116 publications: 704 scientists 117–126 publications: 849 scientists 127–136 publications: 980 scientists 137–146 publications: 942 scientists 147–156 publications: 969 scientists 157–166 publications: 950 scientists 167–176 publications: 951 scientists 177–186 publications: 915 scientists 187–196 publications: 787 scientists 197–206 publications: 841 scientists 207–216 publications: 735 scientists 217–226 publications: 709 scientists 227–236 publications: 651 scientists 237–246 publications: 605 scientists 247–256 publications: 510 scientists 257–266 publications: 524 scientists 267–276 publications: 434 scientists 277–286 publications: 418 scientists 287–296 publications: 350 scientists 297–306 publications: 363 scientists 307–316 publications: 315 scientists 317–326 publications: 296 scientists 327–336 publications: 261 scientists 337–346 publications: 240 scientists 347–356 publications: 219 scientists 357–366 publications: 197 scientists 367–376 publications: 154 scientists 377–386 publications: 161 scientists 387–396 publications: 155 scientists 397–406 publications: 145 scientists 407–416 publications: 124 scientists 417–426 publications: 112 scientists 427–436 publications: 132 scientists 437–446 publications: 116 scientists 447–456 publications: 99 scientists 457–466 publications: 81 scientists 467–476 publications: 91 scientists 477–486 publications: 80 scientists 487–496 publications: 80 scientists 497–506 publications: 60 scientists 507–516 publications: 36 scientists 517–526 publications: 46 scientists 527–536 publications: 54 scientists 537–546 publications: 44 scientists 547–556 publications: 43 scientists 557–566 publications: 43 scientists 567–576 publications: 42 scientists 577–586 publications: 25 scientists 587–596 publications: 34 scientists 597–606 publications: 23 scientists 607–616 publications: 33 scientists 617–626 publications: 31 scientists 627–636 publications: 27 scientists 637–646 publications: 25 scientists 647–656 publications: 28 scientists 657–666 publications: 34 scientists 667–676 publications: 18 scientists 677–686 publications: 16 scientists 687–696 publications: 10 scientists 697–706 publications: 12 scientists 707–716 publications: 21 scientists 717–726 publications: 12 scientists 727–736 publications: 12 scientists 737–746 publications: 10 scientists 747–756 publications: 7 scientists 757–766 publications: 13 scientists 767–776 publications: 15 scientists 777–786 publications: 13 scientists 787–796 publications: 9 scientists 797–806 publications: 9 scientists 807–816 publications: 7 scientists 817–826 publications: 4 scientists 827–836 publications: 9 scientists 837–846 publications: 7 scientists 847–856 publications: 3 scientists 857–866 publications: 5 scientists 867–876 publications: 5 scientists 877–886 publications: 11 scientists 887–896 publications: 3 scientists 897–906 publications: 4 scientists 907–916 publications: 7 scientists 917–926 publications: 5 scientists 927–936 publications: 6 scientists 937–946 publications: 6 scientists 947–956 publications: 3 scientists 957–966 publications: 7 scientists 967–976 publications: 2 scientists 977–986 publications: 2 scientists 987–996 publications: 1 scientists 997–1,006 publications: 5 scientists 1,007–1,016 publications: 2 scientists 1,017–1,026 publications: 2 scientists 1,027 publications: 1 scientists 1,028+ publications: 100 scientists
47 publications 1,028+

This scientist: 242 publications — 65th percentile

65% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 1,028 publications or more.

Matthew P. Jacobson D-index placement in Biology and Biochemistry in 2026

The chart shows the D-index (discipline H-index) distribution of Biology and Biochemistry scientists ranked by Research.com in 2026. The highlighted bar marks where Matthew P. Jacobson sits on this spectrum.

40–41 D-Index: 80 scientists 42–43 D-Index: 183 scientists 44–45 D-Index: 317 scientists 46–47 D-Index: 504 scientists 48–49 D-Index: 718 scientists 50–51 D-Index: 900 scientists 52–53 D-Index: 1,026 scientists 54–55 D-Index: 1,150 scientists 56–57 D-Index: 1,236 scientists 58–59 D-Index: 1,253 scientists 60–61 D-Index: 1,163 scientists 62–63 D-Index: 1,131 scientists 64–65 D-Index: 1,032 scientists 66–67 D-Index: 897 scientists 68–69 D-Index: 814 scientists 70–71 D-Index: 715 scientists 72–73 D-Index: 709 scientists 74–75 D-Index: 596 scientists 76–77 D-Index: 512 scientists 78–79 D-Index: 473 scientists 80–81 D-Index: 412 scientists 82–83 D-Index: 373 scientists 84–85 D-Index: 358 scientists 86–87 D-Index: 285 scientists 88–89 D-Index: 273 scientists 90–91 D-Index: 227 scientists 92–93 D-Index: 208 scientists 94–95 D-Index: 193 scientists 96–97 D-Index: 153 scientists 98–99 D-Index: 157 scientists 100–101 D-Index: 148 scientists 102–103 D-Index: 120 scientists 104–105 D-Index: 113 scientists 106–107 D-Index: 100 scientists 108–109 D-Index: 86 scientists 110–111 D-Index: 67 scientists 112–113 D-Index: 72 scientists 114–115 D-Index: 73 scientists 116–117 D-Index: 64 scientists 118–119 D-Index: 53 scientists 120–121 D-Index: 60 scientists 122–123 D-Index: 54 scientists 124–125 D-Index: 43 scientists 126–127 D-Index: 38 scientists 128–129 D-Index: 49 scientists 130–131 D-Index: 26 scientists 132–133 D-Index: 18 scientists 134–135 D-Index: 23 scientists 136–137 D-Index: 32 scientists 138–139 D-Index: 32 scientists 140–141 D-Index: 27 scientists 142–143 D-Index: 19 scientists 144–145 D-Index: 22 scientists 146–147 D-Index: 12 scientists 148–149 D-Index: 16 scientists 150–151 D-Index: 14 scientists 152–153 D-Index: 10 scientists 154–155 D-Index: 13 scientists 156–157 D-Index: 10 scientists 158–159 D-Index: 7 scientists 160–161 D-Index: 9 scientists 162–163 D-Index: 13 scientists 164–165 D-Index: 4 scientists 166 D-Index: 4 scientists 167+ D-Index: 98 scientists
40 D-Index 167+

This scientist: 78 D-Index — 77th percentile

77% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 167 D-Index or more.

Research.com Recognitions

  • 2004 - Fellow of Alfred P. Sloan Foundation

Overview

Matthew P. Jacobson is affiliated with the University of California, San Francisco in the United States. Their research spans multiple areas within biochemistry, genetics, molecular biology, and medicine, with an emphasis on molecular biology and neurology.

The main fields of study covered by their publications include:

  • Biochemistry, Genetics and Molecular Biology
  • Medicine

Within these broader fields, their subfields of study focus on:

  • Molecular Biology
  • Neurology
  • Physiology
  • Organic Chemistry
  • Biochemistry

Their work involves research on important biomedical topics as demonstrated by the main topics explored in their publications:

  • Parkinson's Disease Mechanisms and Treatments
  • Amyotrophic Lateral Sclerosis Research
  • Alzheimer's disease research and treatments
  • Eicosanoids and Hypertension Pharmacology
  • Fatty Acid Research and Health
  • Computational Drug Discovery Methods
  • Receptor Mechanisms and Signaling

Frequent coauthors collaborating with Matthew P. Jacobson include:

  • Chakrapani Kalyanaraman
  • Theodore R. Holman
  • Diego Garrido Ruiz
  • Lani F. Wu
  • Steven J. Altschuler

The primary publication venues for their research consist of:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Biochemistry
  • Molecular Neurodegeneration
  • Research Square (Research Square)
  • Nature

Among their recent papers are the following:

  • Gasdermin D pore structure reveals preferential release of mature interleukin-1, 2021, Nature
  • A SARS-CoV-2-Human Protein-Protein Interaction Map Reveals Drug Targets and Potential Drug-Repurposing, 2020, bioRxiv (Cold Spring Harbor Laboratory)
  • Structure-based discovery of nonopioid analgesics acting through the α 2A -adrenergic receptor, 2022, Science
  • Cysteine Oxidation in Proteins: Structure, Biophysics, and Simulation, 2022, Biochemistry
  • Synthetic group A streptogramin antibiotics that overcome Vat resistance, 2020, Nature

Matthew P. Jacobson received recognition as a Fellow of the Alfred P. Sloan Foundation in 2004.

Best Publications

  • A SARS-CoV-2 protein interaction map reveals targets for drug repurposing.

    David E. Gordon;Gwendolyn M. Jang;Mehdi Bouhaddou;Jiewei Xu

  • A hierarchical approach to all-atom protein loop prediction.

    Matthew P. Jacobson;David L. Pincus;Chaya S. Rapp;Tyler J.F. Day

  • Novel procedure for modeling ligand/receptor induced fit effects.

    Woody Sherman;Tyler Day;Matthew P Jacobson;Richard A Friesner

  • Dysregulated pH: a perfect storm for cancer progression.

    Bradley A. Webb;Michael Chimenti;Matthew P. Jacobson;Diane L. Barber

  • On the role of the crystal environment in determining protein side-chain conformations.

    Matthew P. Jacobson;Richard A. Friesner;Zhexin Xiang;Barry Honig

  • SIRT5 Regulates the Mitochondrial Lysine Succinylome and Metabolic Networks

    Matthew J. Rardin;Wenjuan He;Yuya Nishida;John C. Newman

  • Testing the conformational hypothesis of passive membrane permeability using synthetic cyclic peptide diastereomers.

    Taha Rezai;Bin Yu;Glenn L Millhauser;Matthew P Jacobson

  • SIRT3 deacetylates mitochondrial 3-hydroxy-3-methylglutaryl CoA synthase 2 and regulates ketone body production.

    Tadahiro Shimazu;Matthew D. Hirschey;Lan Hua;Kristin E. Dittenhafer-Reed

  • Conformational flexibility, internal hydrogen bonding, and passive membrane permeability: successful in silico prediction of the relative permeabilities of cyclic peptides.

    Taha Rezai;Jonathan E. Bock;Mai V. Zhou;Chakrapani Kalyanaraman

  • Gasdermin D pore structure reveals preferential release of mature interleukin-1

    Shiyu Xia;Shiyu Xia;Zhibin Zhang;Zhibin Zhang;Venkat Giri Magupalli;Venkat Giri Magupalli;Juan Lorenzo Pablo;Juan Lorenzo Pablo

  • On-resin N-methylation of cyclic peptides for discovery of orally bioavailable scaffolds

    Tina R White;Chad M Renzelman;Arthur C Rand;Taha Rezai;Taha Rezai

  • A kinematic view of loop closure.

    Evangelos A. Coutsias;Chaok Seok;Matthew P. Jacobson;Ken A. Dill

  • Intracellular pH Sensors: Design Principles and Functional Significance

    Jyoti Srivastava;Diane L. Barber;Matthew P. Jacobson

  • Computer-aided antibody design.

    Daisuke Kuroda;Hiroki Shirai;Matthew P. Jacobson;Haruki Nakamura

  • Molecular mechanics methods for predicting protein-ligand binding.

    Niu Huang;Chakrapani Kalyanaraman;Katarzyna Bernacki;Matthew P. Jacobson

  • Design of reversible, cysteine-targeted Michael acceptors guided by kinetic and computational analysis.

    Shyam Krishnan;Rand M. Miller;Boxue Tian;R. Dyche Mullins

  • Quantifying Correlations Between Allosteric Sites in Thermodynamic Ensembles.

    Christopher L. McClendon;Gregory Friedland;David L. Mobley;Homeira Amirkhani

  • Rescoring docking hit lists for model cavity sites: predictions and experimental testing.

    Alan P. Graves;Devleena M. Shivakumar;Sarah E. Boyce;Matthew P. Jacobson

  • Cofilin is a pH sensor for actin free barbed end formation: role of phosphoinositide binding.

    Christian Frantz;Gabriela Barreiro;Laura Dominguez;Xiaoming Chen

  • Cell-Permeable Cyclic Peptides from Synthetic Libraries Inspired by Natural Products

    William M. Hewitt;Siegfried S. F. Leung;Cameron R. Pye;Alexandra R. Ponkey

Frequent Co-Authors

John A. Gerlt
John A. Gerlt University of Illinois at Urbana-Champaign
Patricia C. Babbitt
Patricia C. Babbitt University of California, San Francisco
Diane L. Barber
Diane L. Barber University of California, San Francisco
Richard A. Friesner
Richard A. Friesner Columbia University
Theodore R. Holman
Theodore R. Holman University of California, Santa Cruz
Andrej Sali
Andrej Sali University of California, San Francisco
R. Dyche Mullins
R. Dyche Mullins University of California, San Francisco
Shaohua Zhao
Shaohua Zhao United States Food and Drug Administration
James H. McKerrow
James H. McKerrow University of California, San Diego
Steven C. Almo
Steven C. Almo Albert Einstein College of Medicine

External Links

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Best Scientists Citing Matthew P. Jacobson

Andrej Sali

Andrej Sali

University of California, San Francisco

Publications: 50

Victor Guallar

Victor Guallar

Barcelona Supercomputing Center

Publications: 49

Richard A. Friesner

Richard A. Friesner

Columbia University

Publications: 41

Brian K. Shoichet

Brian K. Shoichet

University of California, San Francisco

Publications: 40

Torsten Schwede

Torsten Schwede

University of Basel

Publications: 36

Patricia C. Babbitt

Patricia C. Babbitt

University of California, San Francisco

Publications: 35

J. Andrew McCammon

J. Andrew McCammon

University of California, San Diego

Publications: 33

Woody Sherman

Woody Sherman

Psivant Therapeutics

Publications: 31

Eric Verdin

Eric Verdin

Buck Institute for Research on Aging

Publications: 29

Jason E. Gestwicki

Jason E. Gestwicki

University of California, San Francisco

Publications: 29

Nevan J. Krogan

Nevan J. Krogan

University of California, San Francisco

Publications: 28

Conor R. Caffrey

Conor R. Caffrey

University of Montana

Publications: 27

Tanja Kortemme

Tanja Kortemme

University of California, San Francisco

Publications: 27

Xuhui Huang

Xuhui Huang

University of Wisconsin–Madison

Publications: 27

Stine F. Pedersen

Stine F. Pedersen

University of Copenhagen

Publications: 26

James H. McKerrow

James H. McKerrow

University of California, San Diego

Publications: 26

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