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Genetics

D-Index
75
Citations
30612
World Ranking
1875
National Ranking
23

Overview

Marta Gut is affiliated with the Centro Nacional de Análisis Genómico in Spain and has a research profile centered around the fields of Biochemistry, Genetics, and Molecular Biology as well as Medicine. Their work spans several subfields including Molecular Biology, Genetics, Immunology, Cancer Research, and Infectious Diseases.

The scientist's research topics include:

  • Genomics and Rare Diseases
  • Genomics and Phylogenetic Studies
  • Single-cell and spatial transcriptomics
  • Cancer Genomics and Diagnostics
  • Genomic variations and chromosomal abnormalities
  • RNA modifications and cancer
  • Genetic diversity and population structure

Frequent co-authors collaborating with Marta Gut are:

  • Marta Gut (25 publications)
  • Sergi Beltrán (25 publications)
  • Anna Esteve-Codina (22 publications)
  • Tyler Alioto (18 publications)
  • Steven Laurie (16 publications)

The research has been regularly published in venues such as:

  • bioRxiv (Cold Spring Harbor Laboratory) with 22 publications
  • Nature Communications with 13 publications
  • European Journal of Human Genetics with 6 publications
  • Zenodo (CERN European Organization for Nuclear Research) with 5 publications
  • Scientific Reports with 4 publications

Some recent papers authored or co-authored by Marta Gut include:

  • Towards complete and error-free genome assemblies of all vertebrate species, 2021, Nature
  • SPOTlight: seeded NMF regression to deconvolute spatial transcriptomics spots with single-cell transcriptomes, 2021, Nucleic Acids Research
  • Benchmarking single-cell RNA-sequencing protocols for cell atlas projects, 2020, Nature Biotechnology
  • Integrative pathway enrichment analysis of multivariate omics data, 2020, Nature Communications
  • Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis, 2020, Communications Biology

Marta Gut's body of work contributes to the broader understanding of genomics and molecular biology through diverse methodologies including genome assembly, single-cell transcriptomics, integrative pathway analysis, and cancer genomics.

Best Publications

  • Pan-cancer analysis of whole genomes

    Peter J. Campbell;Gad Getz;Jan O. Korbel;Joshua M. Stuart

  • Transcriptome and genome sequencing uncovers functional variation in humans

    Tuuli Lappalainen;Michael Sammeth;Marc R. Friedländer;Peter A. C. ‘t Hoen

  • International network of cancer genome projects

    Thomas J. Hudson;Thomas J. Hudson;Warwick Anderson;Axel Aretz;Anna D. Barker

  • Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia

    Xose S. Puente;Magda Pinyol;Víctor Quesada;Laura Conde

  • Exome sequencing identifies recurrent mutations of the splicing factor SF3B1 gene in chronic lymphocytic leukemia.

    Víctor Quesada;Laura Conde;Neus Villamor;Gonzalo R Ordóñez

  • Great ape genetic diversity and population history

    Javier Prado-Martinez;Peter H. Sudmant;Jeffrey M. Kidd;Jeffrey M. Kidd;Heng Li

  • Non-coding recurrent mutations in chronic lymphocytic leukaemia

    Xose S. Puente;Silvia Beà;Rafael Valdés-Mas;Neus Villamor

  • Patterns of somatic structural variation in human cancer genomes

    Yilong Li;Nicola D Roberts;Jeremiah A Wala;Jeremiah A Wala;Ofer Shapira;Ofer Shapira

  • Epigenomic analysis detects widespread gene-body DNA hypomethylation in chronic lymphocytic leukemia

    Marta Kulis;Simon Heath;Marina Bibikova;Ana C Queirós

  • Genomic Landscape of Ewing Sarcoma Defines an Aggressive Subtype with Co-Association of STAG2 and TP53 Mutations

    Franck Tirode;Didier Surdez;Xiaotu Ma;Matthew Parker

  • Whole-genome bisulfite sequencing of two distinct interconvertible DNA methylomes of mouse embryonic stem cells

    Ehsan Habibi;Arie B. Brinkman;Julia Arand;Leonie I. Kroeze

  • Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects

    Elisabetta Mereu;Atefeh Lafzi;Catia Moutinho;Christoph Ziegenhain

  • X-linked recessive TLR7 deficiency in ~1% of men under 60 years old with life-threatening COVID-19.

    Takaki Asano;Bertrand Boisson;Bertrand Boisson;Bertrand Boisson;Fanny Onodi;Daniela Matuozzo;Daniela Matuozzo

  • Transcription initiation platforms and GTF recruitment at tissue-specific enhancers and promoters

    Frederic Koch;Romain Fenouil;Marta Gut;Pierre Cauchy

  • Chimpanzee genomic diversity reveals ancient admixture with bonobos

    Marc de Manuel;Martin Kuhlwilm;Peter Frandsen;Peter Frandsen;Vitor C. Sousa;Vitor C. Sousa

  • Gibbon genome and the fast karyotype evolution of small apes

    Lucia Carbone;R. Alan Harris;Sante Gnerre;Krishna R. Veeramah;Krishna R. Veeramah

  • Megabase Level Sequencing Reveals Contrasted Organization and Evolution Patterns of the Wheat Gene and Transposable Element Spaces

    Frédéric Choulet;Thomas Wicker;Camille Rustenholz;Etienne Paux

  • Whole-genome fingerprint of the DNA methylome during human B cell differentiation

    Marta Kulis;Angelika Merkel;Simon Heath;Ana C Queirós

  • Morphometric, Behavioral, and Genomic Evidence for a New Orangutan Species

    Alexander Nater;Alexander Nater;Maja Patricia Mattle-Greminger;Anton Nurcahyo;Matthew G Nowak

  • A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing

    Tyler S. Alioto;Ivo Buchhalter;Sophia Derdak;Barbara Hutter

Frequent Co-Authors

Ivo Gut
Ivo Gut Centro Nacional de Análisis Genómico
Simon Heath
Simon Heath Pompeu Fabra University
Sergi Beltran
Sergi Beltran Centro Nacional de Análisis Genómico
Tomas Marques-Bonet
Tomas Marques-Bonet Pompeu Fabra University
Hendrik G. Stunnenberg
Hendrik G. Stunnenberg Radboud University
Elias Campo
Elias Campo University of Barcelona
Holger Heyn
Holger Heyn Pompeu Fabra University
Toni Gabaldón
Toni Gabaldón Institució Catalana de Recerca i Estudis Avançats
Paul Flicek
Paul Flicek The Jackson Laboratory
Pierre Ferrier
Pierre Ferrier Aix-Marseille University

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