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D-Index & Metrics

Biology and Biochemistry

D-Index
53
Citations
15168
World Ranking
15954
National Ranking
656

Overview

Jacques Colinge is affiliated with the University of Montpellier in France and has a research focus primarily within the fields of Biochemistry, Genetics and Molecular Biology, and Medicine. Their scholarly output encompasses a range of topics including Gene Regulatory Network Analysis, Cancer Genomics and Diagnostics, and Single-cell and spatial transcriptomics, presenting a diversified research portfolio grounded in molecular biology and oncology.

Their work spans several subfields of study such as Molecular Biology, Oncology, Cancer Research, Immunology, and Cell Biology. These areas are reflected in the themes addressed in their publications and collaborations.

Notable recent papers by Colinge include:

  • SingleCellSignalR: inference of intercellular networks from single-cell transcriptomics (2020), published in Nucleic Acids Research
  • The landscape of cancer-associated fibroblasts in colorectal cancer liver metastases (2022), published in Theranostics
  • Transcriptomic and genomic heterogeneity in blastic plasmacytoid dendritic cell neoplasms: from ontogeny to oncogenesis (2021), published in Blood Advances
  • Machine Learning-Assisted Evaluation of Circulating DNA Quantitative Analysis for Cancer Screening (2020), published in Advanced Science
  • The immune contexture of primary central nervous system diffuse large B cell lymphoma associates with patient survival and specific cell signaling (2021), published in Theranostics

Colinge frequently collaborates with several researchers, including Jean-Philippe Villemin, Patrice Ravel, Andrei Turtoï, Guillaume Tosato, and Florence Boissière-Michot. These collaborations highlight a network of coauthors with whom they share multiple publications.

Their research has appeared prominently in a variety of scientific journals, with recurring publications in the following venues:

  • bioRxiv (Cold Spring Harbor Laboratory) - 16 publications
  • Theranostics - 4 publications
  • Scientific Reports - 3 publications
  • Nucleic Acids Research - 2 publications
  • Advanced Science - 2 publications

Best Publications

  • The CRAPome: a contaminant repository for affinity purification–mass spectrometry data

    Dattatreya Mellacheruvu;Zachary Wright;Amber L. Couzens;Jean Philippe Lambert

  • An orthogonal proteomic-genomic screen identifies AIM2 as a cytoplasmic DNA sensor for the inflammasome

    Tilmann Bürckstümmer;Christoph Baumann;Stephan Blüml;Stephan Blüml;Evelyn Dixit

  • Gene essentiality and synthetic lethality in haploid human cells

    Vincent A. Blomen;Peter Májek;Lucas T. Jae;Johannes W. Bigenzahn

  • Chemical proteomic profiles of the BCR-ABL inhibitors imatinib, nilotinib, and dasatinib reveal novel kinase and nonkinase targets

    Uwe Rix;Oliver Hantschel;Gerhard Dürnberger;Lily L. Remsing Rix

  • IFIT1 is an antiviral protein that recognizes 5′-triphosphate RNA

    Andreas Pichlmair;Caroline Lassnig;Carol-Ann Eberle;Maria W Górna

  • Stereospecific targeting of MTH1 by (S)-crizotinib as an anticancer strategy

    Kilian V. M. Huber;Eidarus Salah;Branka Radic;Manuela Gridling

  • OLAV: Towards high‐throughput tandem mass spectrometry data identification

    Jacques Colinge;Alexandre Masselot;Marc Giron;Thierry Dessingy

  • Artemisinins Target GABAA Receptor Signaling and Impair α Cell Identity

    Jin Li;Tamara Casteels;Thomas Frogne;Camilla Ingvorsen

  • SingleCellSignalR: inference of intercellular networks from single-cell transcriptomics.

    Simon Cabello-Aguilar;Simon Cabello-Aguilar;Mélissa Alame;Fabien Kon-Sun-Tack;Fabien Kon-Sun-Tack;Caroline Fau;Caroline Fau

  • The Btk tyrosine kinase is a major target of the Bcr-Abl inhibitor dasatinib

    Oliver Hantschel;Uwe Rix;Uwe Schmidt;Tilmann Bürckstümmer

  • Cell-Cycle Regulation Accounts for Variability in Ki-67 Expression Levels.

    Michal Sobecki;Karim Mrouj;Jacques Colinge;François Gerbe

  • Global target profile of the kinase inhibitor bosutinib in primary chronic myeloid leukemia cells

    L L Remsing Rix;U Rix;J Colinge;O Hantschel

  • A chemical and phosphoproteomic characterization of dasatinib action in lung cancer.

    Jiannong Li;Uwe Rix;Bin Fang;Yun Bai

  • Viral immune modulators perturb the human molecular network by common and unique strategies

    Andreas Pichlmair;Kumaran Kandasamy;Gualtiero Alvisi;Orla Mulhern

  • CD14 is a coreceptor of Toll-like receptors 7 and 9

    Christoph L. Baumann;Irene M. Aspalter;Omar Sharif;Andreas Pichlmair

  • Interlaboratory reproducibility of large-scale human protein-complex analysis by standardized AP-MS.

    Markku Varjosalo;Roberto Sacco;Alexey Stukalov;Audrey van Drogen

  • Proteome-wide drug and metabolite interaction mapping by thermal-stability profiling

    Kilian V M Huber;Karin M Olek;André C Müller;Chris Soon Heng Tan

  • Charting the molecular network of the drug target Bcr-Abl

    Marc Brehme;Oliver Hantschel;Jacques Colinge;Ines Kaupe

  • A chemical-genetic screen reveals a mechanism of resistance to PI3K inhibitors in cancer

    Markus K Muellner;Iris Z Uras;Bianca V Gapp;Claudia Kerzendorfer

  • A cellular screen identifies ponatinib and pazopanib as inhibitors of necroptosis.

    A Fauster;M Rebsamen;K V M Huber;J W Bigenzahn

Frequent Co-Authors

Giulio Superti-Furga
Giulio Superti-Furga Medical University of Vienna
Keiryn L. Bennett
Keiryn L. Bennett Medical University of Vienna
Sylvia Knapp
Sylvia Knapp Medical University of Vienna
Christoph Bock
Christoph Bock Austrian Academy of Sciences
Martin Bilban
Martin Bilban Medical University of Vienna
Peter Valent
Peter Valent Medical University of Vienna
Vincent Cavaillès
Vincent Cavaillès Institute of Cancer Research of Montpellier
Thijn R. Brummelkamp
Thijn R. Brummelkamp Antoni van Leeuwenhoek Hospital
Charles Theillet
Charles Theillet University of Montpellier
Ursula Schmidt-Erfurth
Ursula Schmidt-Erfurth Medical University of Vienna

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