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Ecology and Evolution

D-Index
68
Citations
27479
World Ranking
1495
National Ranking
60

Overview

Fabrice Not is affiliated with the Roscoff Marine Station in France. Their research primarily focuses on Environmental Science, Biochemistry, Genetics and Molecular Biology, and Earth and Planetary Sciences. Within these broad fields, the subfields of Ecology, Molecular Biology, Oceanography, Atmospheric Science, and Paleontology define their scientific contributions.

The main topics covered in Fabrice Not's work include:

  • Protist diversity and phylogeny
  • Microbial Community Ecology and Physiology
  • Marine and coastal ecosystems
  • Environmental DNA in Biodiversity Studies
  • Geology and Paleoclimatology Research
  • Marine Biology and Ecology Research
  • Paleontology and Stratigraphy of Fossils

Fabrice Not has published multiple research papers in prominent scientific journals. Some recent papers include:

  • Tara Oceans: towards global ocean ecosystems biology, 2020, Nature Reviews Microbiology
  • Cryptic and abundant marine viruses at the evolutionary origins of Earth's RNA virome, 2022, Science
  • Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean, 2022, Cell Genomics
  • Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean, 2021, Nature Microbiology
  • The Mixoplankton Database (MDB): Diversity of photo-phago-trophic plankton in form, function, and distribution across the global ocean, 2023, Journal of Eukaryotic Microbiology

The most frequent co-authors collaborating with Fabrice Not have been Per Juel Hansen, Sarah Romac, Colomban de Vargas, Miguel M. Sandin, and Joost S Mansour.

In terms of publication venues, Fabrice Not has contributed predominantly to Zenodo (CERN European Organization for Nuclear Research) and bioRxiv (Cold Spring Harbor Laboratory). Other notable venues include Protist, Molecular Ecology, and ISME Communications.

Best Publications

  • Structure and function of the global ocean microbiome

    Shinichi Sunagawa;Luis Pedro Coelho;Samuel Chaffron;Jens Roat Kultima

  • The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy

    Laure Guillou;Dipankar Bachar;Stéphane Audic;David Bass

  • Eukaryotic plankton diversity in the sunlit ocean

    Colomban de Vargas;Colomban de Vargas;Stéphane Audic;Stéphane Audic;Nicolas Henry;Nicolas Henry;Johan Decelle;Johan Decelle

  • Determinants of community structure in the global plankton interactome

    Gipsi Lima-Mendez;Karoline Faust;Nicolas Henry;Johan Decelle

  • Plankton networks driving carbon export in the oligotrophic ocean.

    Lionel Guidi;Samuel Chaffron;Lucie Bittner;Damien Eveillard

  • Marine DNA Viral Macro- and Microdiversity from Pole to Pole.

    Ann C. Gregory;Ahmed A. Zayed;Nádia Conceição-Neto;Ben Temperton

  • Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas

    Alexandra Z. Worden;Jae-Hyeok Lee;Thomas Mock;Pierre Rouzé

  • Patterns and ecological drivers of ocean viral communities

    Jennifer R. Brum;J. Cesar Ignacio-Espinoza;Simon Roux;Guilhem Doulcier;Guilhem Doulcier

  • Mapping of picoeucaryotes in marine ecosystems with quantitative PCR of the 18S rRNA gene.

    Fei Zhu;Ramon Massana;Fabrice Not;Dominique Marie

  • Patterns of Rare and Abundant Marine Microbial Eukaryotes

    Ramiro Logares;Stéphane Audic;Stéphane Audic;David Bass;Lucie Bittner;Lucie Bittner;Lucie Bittner

  • Global phylogeography of marine Synechococcus and Prochlorococcus reveals a distinct partitioning of lineages among oceanic biomes.

    Katrin Zwirglmaier;Ludwig Jardillier;Martin Ostrowski;Sophie Mazard

  • A Holistic Approach to Marine Eco-Systems Biology

    Eric Karsenti;Silvia G. Acinas;Peer Bork;Chris Bowler;Chris Bowler

  • Tara Oceans: towards global ocean ecosystems biology.

    Shinichi Sunagawa;Silvia G Acinas;Peer Bork;Peer Bork;Chris Bowler

  • Open science resources for the discovery and analysis of Tara Oceans data.

    Stéphane Pesant;Fabrice Not;Marc Picheral;Stefanie Kandels-Lewis

  • Global Trends in Marine Plankton Diversity across Kingdoms of Life.

    Federico M. Ibarbalz;Nicolas Henry;Manoela C. Brandão;Séverine Martini

  • Defining Planktonic Protist Functional Groups on Mechanisms for Energy and Nutrient Acquisition: Incorporation of Diverse Mixotrophic Strategies

    Aditee Mitra;Kevin J. Flynn;Urban Tillmann;John A. Raven

  • Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome

    Guillem Salazar;Lucas Paoli;Adriana Alberti;Jaime Huerta-Cepas

  • Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

    Ramon Massana;Angélique Gobet;Angélique Gobet;Stéphane Audic;Stéphane Audic;David Bass;David Bass

  • A global ocean atlas of eukaryotic genes

    Quentin Carradec;Eric Pelletier;Corinne Da Silva;Adriana Alberti

  • Acquired phototrophy in aquatic protists

    Diane K. Stoecker;Matthew D. Johnson;Colomban de Vargas;Fabrice Not

  • Plankton networks driving carbon export in the oligotrophic ocean

    Lionel Guidi;Samuel Chaffron;Lucie Bittner;Damien Eveillard

  • Open science resources for the discovery and analysis of Tara Oceans data

    Stéphane Pesant;Fabrice Not;Marc Picheral;Stefanie Kandels-Lewis

Frequent Co-Authors

Patrick Wincker
Patrick Wincker University of Paris-Saclay
Lucie Bittner
Lucie Bittner Université Paris Cité
Marc Picheral
Marc Picheral Université Paris Cité
Hiroyuki Ogata
Hiroyuki Ogata Kyoto University
Lionel Guidi
Lionel Guidi Centre national de la recherche scientifique, CNRS
Gabriel Gorsky
Gabriel Gorsky Sorbonne University
Eric Karsenti
Eric Karsenti École Normale Supérieure
Stephane Pesant
Stephane Pesant University of Bremen
Shinichi Sunagawa
Shinichi Sunagawa Swiss Institute of Bioinformatics
Daniel Vaulot
Daniel Vaulot Station Biologique De Roscoff

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