H-Index & Metrics Top Publications

H-Index & Metrics

Discipline name H-index Citations Publications World Ranking National Ranking
Biology and Biochemistry H-index 48 Citations 10,436 122 World Ranking 11442 National Ranking 4939

Overview

What is he best known for?

The fields of study he is best known for:

  • Ecology
  • Bacteria
  • Genome

The scientist’s investigation covers issues in Human virome, Metagenomics, Genome, Ecology and Computational biology. His studies in Human virome integrate themes in fields like Immunology, Indigestion, Abdominal pain and Diarrhea. His research in Metagenomics intersects with topics in Taxonomy, Caudovirales and RefSeq.

His Genome research includes themes of Bacterial virus and Virus. Gene prediction, DNA microarray, Phylogenetic tree and Contig is closely connected to Annotation in his research, which is encompassed under the umbrella topic of Computational biology. His Ecosystem course of study focuses on Marine biology and Trophic level and Total organic carbon.

His most cited work include:

  • VirSorter: mining viral signal from microbial genomic data (483 citations)
  • Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study (447 citations)
  • Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study (447 citations)

What are the main themes of his work throughout his whole career to date?

His main research concerns Metagenomics, Genome, Ecology, Genetics and Ecosystem. He studies Metagenomics, focusing on Human virome in particular. Simon Roux has researched Human virome in several fields, including Microbiome, Community, Horizontal gene transfer and Transduction.

Simon Roux interconnects Evolutionary biology, Virus, Computational biology and Archaea in the investigation of issues within Genome. His Ecology study frequently links to related topics such as Deep sea. Simon Roux combines subjects such as Trophic level, Soil carbon, Microbial ecology and Host with his study of Ecosystem.

He most often published in these fields:

  • Metagenomics (54.67%)
  • Genome (48.00%)
  • Ecology (36.00%)

What were the highlights of his more recent work (between 2019-2021)?

  • Genome (48.00%)
  • Metagenomics (54.67%)
  • Microbiome (12.67%)

In recent papers he was focusing on the following fields of study:

Simon Roux mostly deals with Genome, Metagenomics, Microbiome, Ecology and Computational biology. His biological study spans a wide range of topics, including Evolutionary biology and Caudovirales. His Metagenomics research incorporates themes from Organism and Viral replication.

Ecology and Microbial ecology are commonly linked in his work. The concepts of his Computational biology study are interwoven with issues in RNA, Viral genomes, DNA, Human virome and In silico. His study explores the link between Human virome and topics such as Virus that cross with problems in Isolation and DNA extraction.

Between 2019 and 2021, his most popular works were:

  • Giant virus diversity and host interactions through global metagenomics. (52 citations)
  • A genomic catalog of Earth’s microbiomes (35 citations)
  • DRAM for distilling microbial metabolism to automate the curation of microbiome function (21 citations)

In his most recent research, the most cited papers focused on:

  • Ecology
  • Bacteria
  • Genome

Genome, Metagenomics, Computational biology, Evolutionary biology and Archaea are his primary areas of study. His Genome research integrates issues from Microbiome, Clade and Niche differentiation. His Metagenomics research focuses on Ecosystem and how it relates to Microbial food web and Host.

His Computational biology research integrates issues from Viral genomes and Human virome. His Human virome study incorporates themes from Isolation, Virus and Marine bacteriophage. His Archaea research is multidisciplinary, incorporating elements of DNA sequencing, Viral replication, Lysogenic cycle and Genomics.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Top Publications

Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study

Dae Wook Kang;James B. Adams;Ann C. Gregory;Ann C. Gregory;Thomas Borody.
Microbiome (2017)

617 Citations

VirSorter: mining viral signal from microbial genomic data

Simon Roux;Francois Enault;Bonnie L. Hurwitz;Matthew B. Sullivan.
PeerJ (2015)

515 Citations

Patterns and ecological drivers of ocean viral communities

Jennifer R. Brum;J. Cesar Ignacio-Espinoza;Simon Roux;Guilhem Doulcier;Guilhem Doulcier.
Science (2015)

454 Citations

Determinants of community structure in the global plankton interactome

Gipsi Lima-Mendez;Karoline Faust;Nicolas Henry;Johan Decelle.
Science (2015)

431 Citations

Plankton networks driving carbon export in the oligotrophic ocean.

Lionel Guidi;Samuel Chaffron;Lucie Bittner;Damien Eveillard.
Nature (2016)

401 Citations

Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses

Simon Roux;Jennifer R Brum;Bas E. Dutilh;Bas E. Dutilh;Bas E. Dutilh;Shinichi Sunagawa.
Nature (2016)

379 Citations

Viral dark matter and virus-host interactions resolved from publicly available microbial genomes

Simon Roux;Steven J Hallam;Tanja Woyke;Matthew B Sullivan.
eLife (2015)

273 Citations

Phages rarely encode antibiotic resistance genes: a cautionary tale for virome analyses

François Enault;Arnaud Briet;Léa Bouteille;Simon Roux.
The ISME Journal (2017)

211 Citations

Metavir 2: new tools for viral metagenome comparison and assembled virome analysis

Simon Roux;Simon Roux;Jeremy Tournayre;Jeremy Tournayre;Antoine Mahul;Didier Debroas;Didier Debroas.
BMC Bioinformatics (2014)

208 Citations

Assessing the diversity and specificity of two freshwater viral communities through metagenomics

Simon Roux;Simon Roux;Francois Enault;Francois Enault;Agnès Robin;Agnès Robin;Viviane Ravet;Viviane Ravet.
PLOS ONE (2012)

194 Citations

Profile was last updated on December 6th, 2021.
Research.com Ranking is based on data retrieved from the Microsoft Academic Graph (MAG).
The ranking h-index is inferred from publications deemed to belong to the considered discipline.

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