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Biology and Biochemistry
Netherlands
2023

D-Index & Metrics

Biology and Biochemistry

D-Index
73
Citations
28192
World Ranking
5813
National Ranking
145

Research.com Recognitions

  • 2023 - Research.com Biology and Biochemistry in Netherlands Leader Award

Overview

Bas E. Dutilh is affiliated with Utrecht University in the Netherlands. Their research primarily spans the fields of Biochemistry, Genetics and Molecular Biology, and Environmental Science. Within these fields, their work concentrates on subfields such as Molecular Biology, Ecology, Plant Science, Endocrinology, and Infectious Diseases.

The main research topics addressed by Bas E. Dutilh include:

  • Bacteriophages and microbial interactions
  • Genomics and Phylogenetic Studies
  • Microbial Community Ecology and Physiology
  • Plant Virus Research Studies
  • Gut microbiota and health
  • Plant and Fungal Interactions Research
  • Microbial Metabolic Engineering and Bioproduction

The scientist has coauthored frequently with several researchers, including Daniel Garza, Evelien M. Adriaenssens, Mart Krupovìč, Jens H. Kuhn, and Luisa Rubino. Their collaborations have contributed to expanding research in viral taxonomy, microbial ecology, and related areas.

Their recent publications showcase involvement in a variety of topics within biological sciences and virology. Selected recent papers include:

  • Eleven grand challenges in single-cell data science (2020), published in Genome Biology
  • Changes to virus taxonomy and to the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2021), published in Archives of Virology
  • iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria (2023), published in PLoS Biology
  • Changes to virus taxonomy and the Statutes ratified by the International Committee on Taxonomy of Viruses (2020), published in Archives of Virology
  • Recent changes to virus taxonomy ratified by the International Committee on Taxonomy of Viruses (2022), published in Archives of Virology

Bas E. Dutilh has published extensively in several scientific venues. The most frequent publication outlets include:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Zenodo (CERN European Organization for Nuclear Research)
  • Archives of Virology
  • Nature Communications
  • ISME Communications

Best Publications

  • Nitrite-driven anaerobic methane oxidation by oxygenic bacteria

    Katharina F. Ettwig;Margaret K. Butler;Margaret K. Butler;Denis Le Paslier;Denis Le Paslier;Eric Pelletier;Eric Pelletier

  • Deciphering the evolution and metabolism of an anammox bacterium from a community genome

    Marc Strous;Eric Pelletier;Sophie Mangenot;Thomas Rattei

  • Eleven grand challenges in single-cell data science

    David Lähnemann;David Lähnemann;Johannes Köster;Johannes Köster;Ewa Szczurek;Davis J. McCarthy;Davis J. McCarthy

  • Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2017)

    Andrew M. Q. King;Elliot J. Lefkowitz;Arcady R. Mushegian;Michael J. Adams

  • A bacterial driver-passenger model for colorectal cancer: beyond the usual suspects.

    Harold Tjalsma;Annemarie Boleij;Julian Roberto Marchesi;Bas E. Dutilh

  • A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes

    Bas E. Dutilh;Noriko Cassman;Katelyn McNair;Savannah E. Sanchez

  • Marine DNA Viral Macro- and Microdiversity from Pole to Pole.

    Ann C. Gregory;Ahmed A. Zayed;Nádia Conceição-Neto;Ben Temperton

  • Minimum information about an uncultivated virus genome (MIUVIG)

    Simon Roux;Evelien M. Adriaenssens;Bas E. Dutilh;Eugene V. Koonin

  • Metagenomics and future perspectives in virus discovery.

    John L Mokili;Forest Rohwer;Bas E Dutilh;Bas E Dutilh

  • Towards the Human Colorectal Cancer Microbiome

    Julian R. Marchesi;Bas E. Dutilh;Bas E. Dutilh;Neil Hall;Wilbert H. M. Peters

  • Targeting mechanisms of tailed bacteriophages

    Franklin L Nobrega;Marnix Vlot;Patrick A de Jonge;Patrick A de Jonge;Lisa L Dreesens

  • Computational approaches to predict bacteriophage–host relationships

    Robert A. Edwards;Katelyn McNair;Karoline Faust;Jeroen Raes;Jeroen Raes

  • Computational pan-genomics: status, promises and challenges.

    Tobias Marschall;Manja Marz;Manja Marz;Thomas Abeel;Louis Dijkstra

  • Robust taxonomic classification of uncharted microbial sequences and bins with CAT and BAT

    F. A. Bastiaan von Meijenfeldt;Ksenia Arkhipova;Diego D. Cambuy;Felipe H. Coutinho;Felipe H. Coutinho;Felipe H. Coutinho

  • Genome-based microbial ecology of anammox granules in a full-scale wastewater treatment system

    Daan R Speth;Michiel H In 't Zandt;Simon Guerrero-Cruz;Bas E Dutilh;Bas E Dutilh;Bas E Dutilh

  • Molecular and Evolutionary Determinants of Bacteriophage Host Range

    Patrick A. de Jonge;Patrick A. de Jonge;Franklin L. Nobrega;Stan J.J. Brouns;Stan J.J. Brouns;Bas E. Dutilh;Bas E. Dutilh

  • Taxonomy of prokaryotic viruses: 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee

    Mart Krupovic;Bas E Dutilh;Bas E Dutilh;Bas E Dutilh;Evelien M Adriaenssens;Johannes Wittmann

  • Changes to virus taxonomy and the Statutes ratified by the International Committee on Taxonomy of Viruses (2020).

    Peter J. Walker;Stuart G. Siddell;Elliot J. Lefkowitz;Arcady R. Mushegian

  • The New Scope of Virus Taxonomy: Partitioning the Virosphere Into 15 Hierarchical Ranks

    Alexander E. Gorbalenya;Alexander E. Gorbalenya;Mart Krupovic;Arcady Mushegian;Andrew M. Kropinski

  • The metagenome of the marine anammox bacterium 'Candidatus Scalindua profunda' illustrates the versatility of this globally important nitrogen cycle bacterium

    Jack van de Vossenberg;Dagmar Woebken;Wouter J Maalcke;Hans J C T Wessels

Frequent Co-Authors

Martijn A. Huynen
Martijn A. Huynen Radboud University Medical Center
Fabiano L. Thompson
Fabiano L. Thompson Federal University of Rio de Janeiro
Jens H. Kuhn
Jens H. Kuhn National Institutes of Health
Andrew M. Kropinski
Andrew M. Kropinski University of Guelph
Mike S. M. Jetten
Mike S. M. Jetten Radboud University
Mart Krupovic
Mart Krupovic Université Paris Cité
Stan J. J. Brouns
Stan J. J. Brouns Delft University of Technology
Rob Lavigne
Rob Lavigne KU Leuven
Evelien M. Adriaenssens
Evelien M. Adriaenssens Norwich Research Park
Matthew B. Sullivan
Matthew B. Sullivan The Ohio State University

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