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Computer Science

D-Index
41
Citations
37965
World Ranking
8548
National Ranking
3653

Overview

Angie S. Hinrichs is affiliated with the University of California, Santa Cruz in the United States. Their research primarily spans fields within Biochemistry, Genetics, and Molecular Biology, with a significant focus on Medicine.

Their work covers several subfields including Molecular Biology, Infectious Diseases, Genetics, Plant Science, and Epidemiology. Key topics Hinrichs has contributed to include Genomics and Phylogenetic Studies, SARS-CoV-2 and COVID-19 Research, vaccines and immunoinformatics approaches, CRISPR and Genetic Engineering, Evolution and Genetic Dynamics, Plant Virus Research Studies, and Bacteriophages and microbial interactions.

Hinrichs has collaborated frequently with several researchers. Frequent co-authors include:

  • Yatish Turakhia
  • Russell Corbett-Detig
  • David Haussler
  • Bryan Thornlow
  • Jakob McBroome

The scientist has published in various venues, with the most frequent being:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Nucleic Acids Research
  • Zenodo (CERN European Organization for Nuclear Research)
  • Nature Genetics
  • Nature

Selected recent papers authored or co-authored by Hinrichs include:

  • The UCSC Genome Browser database: 2025 update, 2024, Nucleic Acids Research
  • The UCSC Genome Browser database: 2024 update, 2023, Nucleic Acids Research
  • Ultrafast Sample placement on Existing tRees (UShER) enables real-time phylogenetics for the SARS-CoV-2 pandemic, 2021, Nature Genetics
  • The UCSC Genome Browser database: 2021 update, 2020, Nucleic Acids Research
  • The UCSC Genome Browser database: 2023 update, 2022, Nucleic Acids Research

Best Publications

  • Initial sequencing and comparative analysis of the mouse genome.

    Robert H. Waterston;Kerstin Lindblad-Toh;Ewan Birney;Jane Rogers

  • Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

    Ewan Birney;John A. Stamatoyannopoulos;Anindya Dutta;Roderic Guigó

  • Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

    Adam Siepel;Gill Bejerano;Jakob Skou Pedersen;Angie S Hinrichs

  • Evolution's cauldron: Duplication, deletion, and rearrangement in the mouse and human genomes

    W. James Kent;Robert Baertsch;Angie Hinrichs;Webb Miller

  • Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

    Ladeana W. Hillier;Webb Miller;Ewan Birney;Wesley Warren

  • Genome sequence of the Brown Norway rat yields insights into mammalian evolution

    Richard A. Gibbs;George M. Weinstock;Michael L. Metzker;Donna M. Muzny

  • Evolution of genes and genomes on the Drosophila phylogeny.

    Andrew G. Clark;Michael B. Eisen;Michael B. Eisen;Douglas R. Smith;Casey M. Bergman

  • The UCSC Genome Browser Database

    D. Karolchik;R. Baertsch;M. Diekhans;Terrence Furey

  • The UCSC Genome Browser database: update 2011

    Pauline A. Fujita;Brooke Rhead;Ann S. Zweig;Angie S. Hinrichs

  • The UCSC Genome Browser Database: update 2006

    A. S. Hinrichs;D. Karolchik;R. Baertsch;G. P. Barber

  • BigWig and BigBed

    Unknown

  • Mapping copy number variation by population-scale genome sequencing

    Ryan E. Mills;Klaudia Walter;Chip Stewart;Robert E. Handsaker

  • Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project

    Mark B. Gerstein;Zhi John Lu;Eric L. Van Nostrand;Chao Cheng

  • The UCSC Genome Browser database: 2015 update

    Kate R. Rosenbloom;Joel Armstrong;Galt P. Barber;Jonathan Casper

  • The UCSC Genome Browser database: extensions and updates 2013.

    Laurence R. Meyer;Ann S. Zweig;Angie S. Hinrichs;Donna Karolchik

  • The UCSC Genome Browser database: 2019 update.

    Maximilian Haeussler;Ann S Zweig;Cath Tyner;Matthew L Speir

  • The UCSC Genome Browser database: 2014 update

    Donna Karolchik;Galt P. Barber;Jonathan Casper;Hiram Clawson

  • The UCSC Genome Browser database: update 2010

    Brooke L. Rhead;Donna Karolchik;Robert M. Kuhn;Angie S. Hinrichs

  • Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures

    Alexander Stark;Michael F Lin;Pouya Kheradpour;Jakob Skou Pedersen;Jakob Skou Pedersen

  • The UCSC Genome Browser database: 2021 update

    Jairo Navarro Gonzalez;Ann S Zweig;Matthew L Speir;Daniel Schmelter

  • The UCSC Genome Browser Database: update 2009

    R. M. Kuhn;D. Karolchik;A. S. Zweig;T. Wang

Frequent Co-Authors

David Haussler
David Haussler University of California, Santa Cruz
W. James Kent
W. James Kent University of California, Santa Cruz
Brian J. Raney
Brian J. Raney University of California, Santa Cruz
Kate R. Rosenbloom
Kate R. Rosenbloom University of California, Santa Cruz
Donna Karolchik
Donna Karolchik University of California, Santa Cruz
Robert M. Kuhn
Robert M. Kuhn University of California, Santa Cruz
Mark Diekhans
Mark Diekhans University of California, Santa Cruz
Maximilian Haeussler
Maximilian Haeussler University of California, Santa Cruz
Mark Gerstein
Mark Gerstein Yale University
Michael Snyder
Michael Snyder Stanford University

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