World's Best Scientists 2026 revealed!
Mathieu Blanchette

Mathieu Blanchette

D-Index & Metrics

Computer Science

D-Index
44
Citations
11958
World Ranking
7418
National Ranking
296

Genetics

D-Index
57
Citations
16929
World Ranking
3372
National Ranking
129

Research.com Recognitions

  • 2007 - Fellow of Alfred P. Sloan Foundation

Overview

Mathieu Blanchette is affiliated with McGill University in Canada and is active in the fields of Biochemistry, Genetics, and Molecular Biology. Their research spans a range of topics predominantly in molecular biology, genetics, and cancer research.

The main fields of study for Blanchette's work include:

  • Biochemistry, Genetics and Molecular Biology

Within these, the scientist has contributed to several subfields such as:

  • Molecular Biology
  • Genetics
  • Plant Science
  • Immunology
  • Cancer Research

Blanchette's research addresses multiple focused topics, including:

  • Genomics and Phylogenetic Studies
  • Genomics and Chromatin Dynamics
  • RNA and protein synthesis mechanisms
  • RNA Research and Splicing
  • RNA modifications and cancer
  • Chromosomal and Genetic Variations
  • Glioma Diagnosis and Treatment

The scientist has published in a variety of venues, with some frequently occurring publication platforms being:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Bioinformatics
  • arXiv (Cornell University)
  • Nature Communications
  • Cell

Among the recent papers authored or coauthored by Mathieu Blanchette are:

  • Histone H3.3G34-Mutant Interneuron Progenitors Co-opt PDGFRA for Gliomagenesis, 2020, Cell
  • RADICL-seq identifies general and cell type-specific principles of genome-wide RNA-chromatin interactions, 2020, Nature Communications
  • K27M in canonical and noncanonical H3 variants occurs in distinct oligodendroglial cell lineages in brain midline gliomas, 2022, Nature Genetics
  • Leishmania parasites exchange drug-resistance genes through extracellular vesicles, 2022, Cell Reports
  • Graph neural representational learning of RNA secondary structures for predicting RNA-protein interactions, 2020, Bioinformatics

Frequent coauthors collaborating with Blanchette include:

  • Christopher J. F. Cameron
  • Yanlin Zhang
  • Benjamin Ellezam
  • Michael D. Taylor
  • Claudia L. Kleinman

In 2007, Mathieu Blanchette was recognized as a Fellow of the Alfred P. Sloan Foundation.

Best Publications

  • Aligning Multiple Genomic Sequences With the Threaded Blockset Aligner

    Mathieu Blanchette;W. James Kent;Cathy Riemer;Laura Elnitski

  • Comparative analyses of multi-species sequences from targeted genomic regions

    J. W. Thomas;J. W. Thomas;J. W. Touchman;R. W. Blakesley;G. G. Bouffard

  • Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning.

    Benoît Guillemette;Alain R Bataille;Nicolas Gévry;Maryse Adam

  • The relationship between DNA methylation, genetic and expression inter-individual variation in untransformed human fibroblasts.

    James R Wagner;Stephan Busche;Bing Ge;Tony Kwan

  • Systematic Analysis of the Protein Interaction Network for the Human Transcription Machinery Reveals the Identity of the 7SK Capping Enzyme

    Célia Jeronimo;Diane Forget;Annie Bouchard;Qintong Li

  • Genome-wide Orchestration of Cardiac Functions by the Orphan Nuclear Receptors ERRα and γ

    Catherine R. Dufour;Brian J. Wilson;Janice M. Huss;Daniel P. Kelly

  • The Capsella rubella genome and the genomic consequences of rapid mating system evolution

    Tanja Slotte;Tanja Slotte;Khaled M. Hazzouri;Khaled M. Hazzouri;J. Arvid Ågren;Daniel Koenig

  • Discovery of regulatory elements by a computational method for phylogenetic footprinting.

    Mathieu Blanchette;Martin Tompa

  • Identification and Characterization of Multi-Species Conserved Sequences

    Elliott H. Margulies;Mathieu Blanchette;Nisc Comparative Sequencing Program;David Haussler

  • An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions

    Annabelle Haudry;Adrian E Platts;Emilio Vello;Douglas R Hoen

  • Reconstructing contiguous regions of an ancestral genome

    Webb C. Miller;Jian Ma

  • Genome-wide computational prediction of transcriptional regulatory modules reveals new insights into human gene expression

    Mathieu Blanchette;Alain R. Bataille;Xiaoyu Chen;Christian Poitras

  • Multiple Genome Rearrangement and Breakpoint Phylogeny

    David Sankoff;Mathieu Blanchette

  • Phylo: A Citizen Science Approach for Improving Multiple Sequence Alignment

    Alexander Kawrykow;Gary Roumanis;Alfred Kam;Daniel Kwak

  • Gene order breakpoint evidence in animal mitochondrial phylogeny.

    Mathieu Blanchette;Takashi Kunisawa;David Sankoff

  • Global patterns of cis variation in human cells revealed by high-density allelic expression analysis

    Bing Ge;Dmitry K. Pokholok;Tony Kwan;Elin Grundberg

  • PhyME: a probabilistic algorithm for finding motifs in sets of orthologous sequences.

    Saurabh Sinha;Mathieu Blanchette;Martin Tompa

  • FootPrinter: a program designed for phylogenetic footprinting

    Mathieu Blanchette;Martin Tompa

  • Algorithms for phylogenetic footprinting.

    Mathieu Blanchette;Benno Schwikowski;Martin Tompa

  • Algorithms for phylogenetic footprinting

    Mathieu Blanchette

  • An Atlas of over 90,000 Conserved Noncoding Sequences Provides Insight into Crucifer Regulatory Regions

    Mathieu Blanchette

Frequent Co-Authors

Josée Dostie
Josée Dostie McGill University
David Sankoff
David Sankoff University of Ottawa
Nicholas M. Luscombe
Nicholas M. Luscombe The Francis Crick Institute
Martin Tompa
Martin Tompa University of Washington
Ken Dewar
Ken Dewar McGill University
Vladimir Makarenkov
Vladimir Makarenkov University of Quebec at Montreal
Tomi Pastinen
Tomi Pastinen Children's Mercy Hospital
Boris Lenhard
Boris Lenhard Imperial College London
David Haussler
David Haussler University of California, Santa Cruz

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