World's Best Scientists 2026 revealed!

D-Index & Metrics

Genetics

D-Index
63
Citations
23282
World Ranking
2842
National Ranking
97

Research.com Recognitions

  • 2009 - Fellow of the International Society for Computational Biology
  • 1995 - Fellow of the Royal Society of Canada Academy of Science

Overview

David Sankoff is affiliated with the University of Ottawa in Canada. Their research spans multiple interconnected fields, including biochemistry, genetics, molecular biology, and agricultural and biological sciences. Their work primarily focuses on genomics and phylogenetic studies, chromosomal and genetic variations, and genome rearrangement algorithms.

Sankoff has contributed substantially to molecular biology and plant science research. Their subfields of study also include genetics, ecology, evolution, behavior and systematics, as well as modeling and simulation. This diversity reflects a comprehensive approach to biological inquiry and computational methods in genetics.

The scientist's publication record includes papers in prominent journals, with notable entries such as:

  • "Two divergent haplotypes from a highly heterozygous lychee genome suggest independent domestication events for early and late-maturing cultivars" (2022, Nature Genetics)
  • "A high-contiguity Brassica nigra genome localizes active centromeres and defines the ancestral Brassica genome" (2020, Nature Plants)
  • "Genome sequence and evolution of Betula platyphylla" (2021, Horticulture Research)
  • "The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars" (2024, Nature Genetics)
  • "Buxus and Tetracentron genomes help resolve eudicot genome history" (2022, Nature Communications)

Frequent co-authors in Sankoff's research include Lingling Jin, Chunfang Zheng, Qiaoji Xu, and Jim Leebens-Mack.

  • Lingling Jin
  • Chunfang Zheng
  • Qiaoji Xu
  • Jim Leebens-Mack

The scientist has published multiple articles in venues such as bioRxiv (Cold Spring Harbor Laboratory), arXiv (Cornell University), Nature Genetics, Journal of Computational Biology, and Nature Plants.

  • bioRxiv (Cold Spring Harbor Laboratory)
  • arXiv (Cornell University)
  • Nature Genetics
  • Journal of Computational Biology
  • Nature Plants

David Sankoff has also contributed to academic literature through book publications, including a work released by Springer Science+Business Media titled Computational Advances in Bio and Medical Sciences (2021).

Their research topics cover various dimensions within genomic studies and related fields, such as:

  • Genomics and Phylogenetic Studies
  • Chromosomal and Genetic Variations
  • Genome Rearrangement Algorithms
  • COVID-19 epidemiological studies
  • Coffee research and impacts
  • Plant Virus Research Studies
  • Plant Disease Resistance and Genetics

David Sankoff has been recognized by their peers with honors including the Fellow of the International Society for Computational Biology (2009) and the Fellow of the Royal Society of Canada under the Academy of Science (1995).

Best Publications

  • Time Warps, String Edits, and Macromolecules: The Theory and Practice of Sequence Comparison

    David Sankoff;Joseph B. Kruskal

  • Polyploidy and angiosperm diversification

    Douglas E. Soltis;Victor A. Albert;Jim Leebens-Mack;Charles D. Bell

  • An ancestral mitochondrial DNA resembling a eubacterial genome in miniature

    Lang Bf;Burger G;O'Kelly Cj;Cedergren R

  • Minimal Mutation Trees of Sequences

    David Sankoff

  • Simultaneous Solution of the RNA Folding, Alignment and Protosequence Problems

    David Sankoff

  • RNA secondary structures and their prediction

    Michael Zuker;David Sankoff

  • Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L.

    Jisen Zhang;Xingtan Zhang;Haibao Tang;Qing Zhang

  • The coffee genome provides insight into the convergent evolution of caffeine biosynthesis

    Lorenzo Carretero-Paulet;Alexis Dereeper;Gaëtan Droc

  • The pineapple genome and the evolution of CAM photosynthesis

    Ray Ming;Ray Ming;Robert VanBuren;Robert VanBuren;Robert VanBuren;Ching Man Wai;Ching Man Wai;Haibao Tang;Haibao Tang

  • Locating rearrangement events in a phylogeny based on highly fragmented assemblies

    Chunfang Zheng;David Sankoff

  • Gene order comparisons for phylogenetic inference: evolution of the mitochondrial genome.

    D Sankoff;G Leduc;N Antoine;B Paquin

  • Structural Dynamics of Eukaryotic Chromosome Evolution

    Evan E. Eichler;David Sankoff

  • On the evolutionary descent of organisms and organelles: a global phylogeny based on a highly conserved structural core in small subunit ribosomal RNA

    Michael W. Gray;David Sankoff;Robert J. Cedergren

  • GENOME STRUCTURE AND GENE CONTENT IN PROTIST MITOCHONDRIAL DNAS

    Michael W. Gray;B. Franz Lang;Robert Cedergren;G. Brian Golding

  • Matching Sequences under Deletion/Insertion Constraints

    David Sankoff

  • Comparison of musical sequences

    Marcel Mongeau;David Sankoff

  • Longest common subsequences of two random sequences.

    Vaclav Chvatal;David Sankoff

  • Multiple Genome Rearrangement and Breakpoint Phylogeny

    David Sankoff;Mathieu Blanchette

  • COMPARABLE RATES OF GENE LOSS AND FUNCTIONAL DIVERGENCE AFTER GENOME DUPLICATIONS EARLY IN VERTEBRATE EVOLUTION

    Joseph H. Nadeau;David Sankoff

  • Genome rearrangement with gene families

    David Sankoff

Frequent Co-Authors

Robert Cedergren
Robert Cedergren University of Montreal
Victor A. Albert
Victor A. Albert University at Buffalo, State University of New York
Ray Ming
Ray Ming University of Illinois at Urbana-Champaign
Eric Lyons
Eric Lyons University of Arizona
Joseph H. Nadeau
Joseph H. Nadeau Pacific Northwest Diabetes Research Institute
Haibao Tang
Haibao Tang Fujian Agriculture and Forestry University
Shana Poplack
Shana Poplack University of Ottawa
Mathieu Blanchette
Mathieu Blanchette McGill University
Giovanni Giuliano
Giovanni Giuliano National Agency For New Technologies, Energy and Sustainable Economic Development
Michael W. Gray
Michael W. Gray Dalhousie University

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