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Biology and Biochemistry

D-Index
54
Citations
25082
World Ranking
15341
National Ranking
6400

Overview

Martin Morgan is affiliated with the Roswell Park Cancer Institute in the United States. Their research primarily lies within the field of Biochemistry, Genetics and Molecular Biology, with a strong focus on Molecular Biology, Information Systems and Management, Cancer Research, Biophysics, and Information Systems.

The scientist's research topics encompass a variety of areas including:

  • Gene expression and cancer classification
  • Single-cell and spatial transcriptomics
  • Scientific Computing and Data Management
  • Cancer Genomics and Diagnostics
  • Bioinformatics and Genomic Networks
  • Cell Image Analysis Techniques
  • Research Data Management Practices

Their recent publications include:

  • "Tximeta: Reference sequence checksums for provenance identification in RNA-seq" (2020) in PLoS Computational Biology
  • "Inverting the model of genomics data sharing with the NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-space" (2022) in Cell Genomics
  • "Multiomic Analysis of Subtype Evolution and Heterogeneity in High-Grade Serous Ovarian Carcinoma" (2020) in Cancer Research
  • "Multiomic Integration of Public Oncology Databases in Bioconductor" (2020) in JCO Clinical Cancer Informatics
  • "Reliable Analysis of Clinical Tumor-Only Whole-Exome Sequencing Data" (2020) in JCO Clinical Cancer Informatics

Martin Morgan has published multiple papers in notable scientific venues with frequent contributions to:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • JCO Clinical Cancer Informatics
  • Bioinformatics
  • PLoS Computational Biology
  • Journal for ImmunoTherapy of Cancer

Among frequent coauthors, the scientist has collaborated notably with Levi Waldron, Marcel Ramos, Vincent J. Carey, Ludwig Geistlinger, and Sehyun Oh. These collaborations reflect work across a range of domain expertise and research partnerships.

Best Publications

  • Software for computing and annotating genomic ranges.

    Michael F. Lawrence;Wolfgang Huber;Hervé Pagès;Patrick Aboyoun

  • Orchestrating high-throughput genomic analysis with Bioconductor

    Wolfgang Huber;Vincent J Carey;Robert Gentleman;Simon Anders

  • The effect of deleterious mutations on neutral molecular variation.

    B. Charlesworth;M. T. Morgan;D. Charlesworth

  • Pollen limitation of plant reproduction: Ecological and evolutionary causes and consequences

    Tia-Lynn Ashman;Tiffany M Knight;Janette A Steets;Priyanga Amarasekare

  • Bacterial Communities in Women with Bacterial Vaginosis: High Resolution Phylogenetic Analyses Reveal Relationships of Microbiota to Clinical Criteria

    Sujatha Srinivasan;Noah G. Hoffman;Martin T. Morgan;Frederick A. Matsen

  • Orchestrating Single-Cell Analysis with Bioconductor

    Robert A. Amezquita;Aaron T. L. Lun;Aaron T. L. Lun;Etienne Becht;Vince J. Carey

  • INBREEDING DEPRESSION, GENETIC LOAD, AND THE EVOLUTION OF OUTCROSSING RATES IN A MULTILOCUS SYSTEM WITH NO LINKAGE.

    D. Charlesworth;M. T. Morgan;B. Charlesworth

  • The pattern of neutral molecular variation under the background selection model.

    D Charlesworth;B Charlesworth;M T Morgan

  • ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data

    Martin Morgan;Simon Anders;Michael V. Lawrence;Patrick Aboyoun

  • Genome-wide MyoD Binding in Skeletal Muscle Cells: A Potential for Broad Cellular Reprogramming

    Yi Cao;Zizhen Yao;Deepayan Sarkar;Michael Lawrence

  • Accessible, curated metagenomic data through ExperimentHub

    Edoardo Pasolli;Lucas Schiffer;Paolo Manghi;Audrey Renson

  • Mutation accumulation in finite outbreeding and inbreeding populations

    D. Charlesworth;M. T. Morgan;B. Charlesworth

  • VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants

    Valerie Obenchain;Michael F. Lawrence;Vincent J. Carey;Stephanie M. Gogarten

  • Metabolic Signatures of Bacterial Vaginosis

    Sujatha Srinivasan;Martin T. Morgan;Tina L. Fiedler;Danijel Djukovic

  • THE DISSOLUTION OF A COMPLEX GENETIC POLYMORPHISM: THE EVOLUTION OF SELF-FERTILIZATION IN TRISTYLOUS EICHHORNIA PANICULATA (PONTEDERIACEAE).

    Spencer C. H. Barrett;Martin T. Morgan;Brian C. Husband

  • How Does Self-Pollination Evolve? Inferences from Floral Ecology and Molecular Genetic Variation

    Daniel J. Schoen;Martin T. Morgan;Thomas Bataillon

  • Tximeta: Reference sequence checksums for provenance identification in RNA-seq.

    Michael I. Love;Charlotte Soneson;Charlotte Soneson;Peter F. Hickey;Peter F. Hickey;Lisa K. Johnson

  • Explaining phenotypic selection on plant attractive characters: male function, gender balance or ecological context?

    Tia-Lynn Ashman;Martin T. Morgan

  • Recent Genetic Selection in the Ancestral Admixture of Puerto Ricans

    Hua Tang;Shweta Choudhry;Rui Mei;Martin Morgan

  • Genetic loads and estimates of mutation rates in highly inbred plant populations

    B. Charlesworth;D. Charlesworth;M. T. Morgan

Frequent Co-Authors

Vincent J. Carey
Vincent J. Carey Harvard Medical School
David N. Fredricks
David N. Fredricks University of Washington
Brian Charlesworth
Brian Charlesworth University of Edinburgh
Deborah Charlesworth
Deborah Charlesworth University of Edinburgh
Benjamin Haibe-Kains
Benjamin Haibe-Kains Princess Margaret Cancer Centre
Wolfgang Huber
Wolfgang Huber European Bioinformatics Institute
Kasper D. Hansen
Kasper D. Hansen Johns Hopkins University
Jeanne M. Marrazzo
Jeanne M. Marrazzo National Institutes of Health
Neil Risch
Neil Risch University of California, San Francisco

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