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D-Index & Metrics

Biology and Biochemistry

D-Index
69
Citations
25093
World Ranking
7260
National Ranking
554

Overview

Jyoti S. Choudhary is affiliated with the Institute of Cancer Research in the United Kingdom and has a substantial body of work in the fields of biochemistry, genetics, molecular biology, and medicine. Their research covers multiple subfields including molecular biology, immunology, oncology, genetics, and cell biology.

Their academic output highlights key topics such as ubiquitin and proteasome pathways, DNA repair mechanisms, RNA modifications and cancer, genomics and chromatin dynamics, advanced proteomics techniques and applications, RNA and protein synthesis mechanisms, and RNA research and splicing.

Recent notable publications include:

  • Expanded encyclopaedias of DNA elements in the human and mouse genomes (2020, Nature)
  • GENCODE 2021 (2020, Nucleic Acids Research)
  • GENCODE: reference annotation for the human and mouse genomes in 2023 (2022, Nucleic Acids Research)
  • Proteogenomics of Non-smoking Lung Cancer in East Asia Delineates Molecular Signatures of Pathogenesis and Progression (2020, Cell)
  • Single-cell transcriptomics identifies an effectorness gradient shaping the response of CD4+ T cells to cytokines (2020, Nature Communications)

Jyoti S. Choudhary frequently collaborates with several researchers, including Theodoros I. Roumeliotis, Lu Yu, Mercedes Pardo, Christopher J. Lord, and Zuza Kozik. These collaborations reflect ongoing research partnerships and joint contributions to scientific publications.

Their work is regularly published in high-profile venues such as bioRxiv (Cold Spring Harbor Laboratory), Nature Communications, Cancer Research, Nature, and the Journal of Proteome Research, indicating an engagement with reputable journals across molecular and cancer biology disciplines.

Best Publications

  • GENCODE reference annotation for the human and mouse genomes.

    Adam Frankish;Mark Diekhans;Anne-Maud Ferreira;Rory Baldwin Johnson

  • A polygenic burden of rare disruptive mutations in schizophrenia

    Shaun M Purcell;Jennifer L Moran;Menachem Fromer;Douglas Ruderfer

  • Proteomic analysis of NMDA receptor-adhesion protein signaling complexes.

    Holger Husi;Malcolm A. Ward;Jyoti S. Choudhary;Walter P. Blackstock

  • Gencode 2021

    A. Frankish;M. Diekhans;I. Jungreis;J. Lagarde

  • De Novo CNV Analysis Implicates Specific Abnormalities of Postsynaptic Signalling Complexes in the Pathogenesis of Schizophrenia

    George Kirov;Andrew Pocklington;Peter Alan Holmans;Dobril Ivanov

  • OpenMS: a flexible open-source software platform for mass spectrometry data analysis

    Hannes L Röst;Hannes L Röst;Timo Sachsenberg;Stephan Aiche;Chris Bielow

  • Expression Atlas update—an integrated database of gene and protein expression in humans, animals and plants

    Robert Petryszak;Maria Keays;Y. Amy Tang;Nuno A. Fonseca

  • Characterization of the proteome, diseases and evolution of the human postsynaptic density

    Àlex Bayés;Louie N van de Lagemaat;Mark O Collins;Mike D R Croning

  • Molecular characterization and comparison of the components and multiprotein complexes in the postsynaptic proteome.

    Mark O. Collins;Holger Husi;Lu Yu;Julia M. Brandon

  • Accurate and Sensitive Peptide Identification with Mascot Percolator

    Markus Brosch;Lu Yu;Tim Hubbard;Jyoti Choudhary

  • An Expanded Oct4 Interaction Network: Implications for Stem Cell Biology, Development, and Disease

    Mercedes Pardo;Benjamin Lang;Lu Yu;Haydn Prosser

  • Proteomic Analysis of in Vivo Phosphorylated Synaptic Proteins

    Mark O. Collins;Mark O. Collins;Lu Yu;Marcelo P. Coba;Holger Husi

  • Prmt5 is essential for early mouse development and acts in the cytoplasm to maintain ES cell pluripotency

    Wee-Wei Tee;Mercedes Pardo;Thorold W. Theunissen;Lu Yu

  • Proteomics Characterization of Abundant Golgi Membrane Proteins

    Alexander W. Bell;Malcolm A. Ward;Walter P. Blackstock;Hamzah N.M. Freeman

  • Targeted tandem affinity purification of PSD-95 recovers core postsynaptic complexes and schizophrenia susceptibility proteins

    Esperanza Fernández;Mark O Collins;Rachel T Uren;Maksym V Kopanitsa

  • Proteomic and Genomic Characterization of Highly Infectious Clostridium difficile 630 Spores

    Trevor D. Lawley;Nicholas J. Croucher;Lu Yu;Simon Clare

  • A Strand-Specific RNA–Seq Analysis of the Transcriptome of the Typhoid Bacillus Salmonella Typhi

    Timothy T. Perkins;Robert A. Kingsley;Maria C. Fookes;Paul P. Gardner

  • Proteogenomics of Non-smoking Lung Cancer in East Asia Delineates Molecular Signatures of Pathogenesis and Progression.

    Yi Ju Chen;Theodoros I. Roumeliotis;Ya Hsuan Chang;Ching Tai Chen

  • Phosphoinositide metabolism links cGMP-dependent protein kinase G to essential Ca²⁺ signals at key decision points in the life cycle of malaria parasites.

    Mathieu Brochet;Mark O. Collins;Terry K. Smith;Eloise Thompson

  • Evolutionary expansion and anatomical specialization of synapse proteome complexity

    Richard D Emes;Andrew J Pocklington;Christopher N G Anderson;Alex Bayes

Frequent Co-Authors

Seth G. N. Grant
Seth G. N. Grant University of Edinburgh
Gordon Dougan
Gordon Dougan University of Cambridge
David Goulding
David Goulding Wellcome Sanger Institute
Julian C. Rayner
Julian C. Rayner University of Cambridge
Gad Frankel
Gad Frankel Imperial College London
David J. Adams
David J. Adams Wellcome Sanger Institute
Nicholas R. Thomson
Nicholas R. Thomson Wellcome Sanger Institute
Eleftheria Zeggini
Eleftheria Zeggini Technical University of Munich
Oliver Billker
Oliver Billker Umeå University

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