Joshua C. Stein

Best Publications

• The B73 Maize Genome: Complexity, Diversity, and Dynamics

  Patrick S. Schnable;Doreen Ware;Robert S. Fulton;Joshua C. Stein

  4693
  Citations

• Improved maize reference genome with single-molecule technologies

  Yinping Jiao;Paul Peluso;Jinghua Shi;Tiffany Y. Liang

  1302
  Citations

• Molecular cloning of a putative receptor protein kinase gene encoded at the self-incompatibility locus of Brassica oleracea

  Joshua C. Stein;Bruce Howlett;Douglas C. Boyes;Mikhail E. Nasrallah

  1028
  Citations

• Evidence for Network Evolution in an Arabidopsis Interactome Map

  Matija Dreze;Anne-Ruxandra Carvunis;Benoit Charloteaux

  948
  Citations

• Ensembl Genomes 2016: more genomes, more complexity

  Paul Julian Kersey;James E. Allen;Irina Armean;Sanjay Boddu

  604
  Citations

• Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

  Joshua C. Stein;Yeisoo Yu;Dario Copetti;Dario Copetti;Derrick J. Zwickl

  547
  Citations

• MAKER-P: A Tool Kit for the Rapid Creation, Management, and Quality Control of Plant Genome Annotations

  Michael S. Campbell;Mei Yee Law;Carson Holt;Joshua C. Stein

  480
  Citations

• Ensembl Genomes 2020-enabling non-vertebrate genomic research.

  Kevin L. Howe;Bruno Contreras-Moreira;Nishadi De Silva;Gareth Maslen

  467
  Citations

• A genome-wide characterization of microRNA genes in maize.

  Lifang Zhang;Jer-Ming Chia;Sunita Kumari;Joshua C. Stein

  430
  Citations

• Extensive intraspecific gene order and gene structural variations between Mo17 and other maize genomes.

  Silong Sun;Yingsi Zhou;Jian Chen;Junpeng Shi

  406
  Citations

• Engineering Vitamin E Content: From Arabidopsis Mutant to Soy Oil

  Unknown

  346
  Citations

• Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor

  Ruth A. Swanson-Wagner;Steven R. Eichten;Sunita Kumari;Peter Tiffin

  337
  Citations

• A new method to compute K-mer frequencies and its application to annotate large repetitive plant genomes

  Stefan Kurtz;Apurva Narechania;Apurva Narechania;Joshua C Stein;Doreen Ware

  321
  Citations

• Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa , document novel gene space of aus and indica

  Michael C Schatz;Lyza G Maron;Joshua C Stein;Alejandro Hernandez Wences;Alejandro Hernandez Wences

  294
  Citations

• A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor

  Ming Cheng Luo;Yong Q. Gu;Frank M. You;Karin R. Deal

  235
  Citations

• The maize W22 genome provides a foundation for functional genomics and transposon biology

  Nathan M. Springer;Sarah N. Anderson;Carson M. Andorf;Kevin R. Ahern

  233
  Citations

• Gramene 2013: comparative plant genomics resources

  Marcela K. Monaco;Joshua C. Stein;Sushma Naithani;Sharon Wei

  217
  Citations

• Gramene database in 2010: updates and extensions

  Ken Youens-Clark;Edward S. Buckler;Terry M. Casstevens;Charles Chen

  211
  Citations

• Mannose Induces an Endonuclease Responsible for DNA Laddering in Plant Cells

  Unknown

  196
  Citations

• Gramene 2018: unifying comparative genomics and pathway resources for plant research.

  Marcela K. Tello-Ruiz;Sushma Naithani;Joshua C. Stein;Parul Gupta

  164
  Citations