World's Best Scientists 2026 revealed!
Haruki Nakamura

Haruki Nakamura

D-Index & Metrics

Biology and Biochemistry

D-Index
87
Citations
30398
World Ranking
2808
National Ranking
176

Chemistry

D-Index
84
Citations
28726
World Ranking
2787
National Ranking
157

Haruki Nakamura publication distribution in Chemistry in 2026

The chart shows the distribution of publications by all Research.com ranked scientists in the field of Chemistry in 2026. The highlighted bar marks where Haruki Nakamura sits on this spectrum.

61–80 publications: 66 scientists 81–100 publications: 302 scientists 101–120 publications: 623 scientists 121–140 publications: 918 scientists 141–160 publications: 1,218 scientists 161–180 publications: 1,350 scientists 181–200 publications: 1,344 scientists 201–220 publications: 1,281 scientists 221–240 publications: 1,216 scientists 241–260 publications: 1,100 scientists 261–280 publications: 979 scientists 281–300 publications: 939 scientists 301–320 publications: 764 scientists 321–340 publications: 643 scientists 341–360 publications: 628 scientists 361–380 publications: 522 scientists 381–400 publications: 459 scientists 401–420 publications: 397 scientists 421–440 publications: 327 scientists 441–460 publications: 270 scientists 461–480 publications: 265 scientists 481–500 publications: 252 scientists 501–520 publications: 201 scientists 521–540 publications: 185 scientists 541–560 publications: 148 scientists 561–580 publications: 148 scientists 581–600 publications: 132 scientists 601–620 publications: 114 scientists 621–640 publications: 104 scientists 641–660 publications: 91 scientists 661–680 publications: 92 scientists 681–700 publications: 73 scientists 701–720 publications: 57 scientists 721–740 publications: 54 scientists 741–760 publications: 67 scientists 761–780 publications: 45 scientists 781–800 publications: 46 scientists 801–820 publications: 39 scientists 821–840 publications: 32 scientists 841–860 publications: 36 scientists 861–880 publications: 29 scientists 881–900 publications: 26 scientists 901–920 publications: 24 scientists 921–940 publications: 14 scientists 941–960 publications: 23 scientists 961–980 publications: 28 scientists 981–1,000 publications: 15 scientists 1,001–1,020 publications: 29 scientists 1,021–1,040 publications: 12 scientists 1,041–1,060 publications: 19 scientists 1,061–1,080 publications: 12 scientists 1,081–1,100 publications: 6 scientists 1,101–1,120 publications: 8 scientists 1,121–1,140 publications: 12 scientists 1,141–1,160 publications: 5 scientists 1,161–1,180 publications: 6 scientists 1,181–1,200 publications: 14 scientists 1,201–1,220 publications: 7 scientists 1,221–1,240 publications: 2 scientists 1,241–1,260 publications: 6 scientists 1,261–1,280 publications: 4 scientists 1,281–1,294 publications: 6 scientists 1,295+ publications: 100 scientists
61 publications 1,295+

This scientist: 603 publications — 93rd percentile

93% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 1,295 publications or more.

Haruki Nakamura D-index placement in Chemistry in 2026

The chart shows the D-index (discipline H-index) distribution of Chemistry scientists ranked by Research.com in 2026. The highlighted bar marks where Haruki Nakamura sits on this spectrum.

40–41 D-Index: 289 scientists 42–43 D-Index: 612 scientists 44–45 D-Index: 808 scientists 46–47 D-Index: 776 scientists 48–49 D-Index: 835 scientists 50–51 D-Index: 861 scientists 52–53 D-Index: 872 scientists 54–55 D-Index: 933 scientists 56–57 D-Index: 1,051 scientists 58–59 D-Index: 930 scientists 60–61 D-Index: 882 scientists 62–63 D-Index: 834 scientists 64–65 D-Index: 731 scientists 66–67 D-Index: 775 scientists 68–69 D-Index: 683 scientists 70–71 D-Index: 646 scientists 72–73 D-Index: 561 scientists 74–75 D-Index: 501 scientists 76–77 D-Index: 437 scientists 78–79 D-Index: 388 scientists 80–81 D-Index: 354 scientists 82–83 D-Index: 292 scientists 84–85 D-Index: 275 scientists 86–87 D-Index: 254 scientists 88–89 D-Index: 235 scientists 90–91 D-Index: 185 scientists 92–93 D-Index: 192 scientists 94–95 D-Index: 155 scientists 96–97 D-Index: 163 scientists 98–99 D-Index: 125 scientists 100–101 D-Index: 105 scientists 102–103 D-Index: 105 scientists 104–105 D-Index: 112 scientists 106–107 D-Index: 88 scientists 108–109 D-Index: 68 scientists 110–111 D-Index: 69 scientists 112–113 D-Index: 65 scientists 114–115 D-Index: 79 scientists 116–117 D-Index: 61 scientists 118–119 D-Index: 44 scientists 120–121 D-Index: 37 scientists 122–123 D-Index: 40 scientists 124–125 D-Index: 33 scientists 126–127 D-Index: 26 scientists 128–129 D-Index: 34 scientists 130–131 D-Index: 35 scientists 132–133 D-Index: 25 scientists 134–135 D-Index: 27 scientists 136–137 D-Index: 17 scientists 138–139 D-Index: 16 scientists 140–141 D-Index: 20 scientists 142–143 D-Index: 20 scientists 144–145 D-Index: 15 scientists 146–147 D-Index: 9 scientists 148–149 D-Index: 9 scientists 150–151 D-Index: 16 scientists 152–153 D-Index: 11 scientists 154–155 D-Index: 9 scientists 156–157 D-Index: 3 scientists 158 D-Index: 3 scientists 159+ D-Index: 98 scientists
40 D-Index 159+

This scientist: 84 D-Index — 85th percentile

85% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 159 D-Index or more.

Overview

Haruki Nakamura is affiliated with Osaka University in Japan and has contributed to various areas within molecular biology, spectroscopy, atomic and molecular physics, optics, biomedical engineering, and materials chemistry. Their work encompasses multiple subfields and intersects with both experimental and computational techniques.

Their recent publications highlight research across diverse scientific domains. Notable papers include:

  • The dominance model for heterosis explains culm length genetics in a hybrid sorghum variety (2021, Scientific Reports)
  • Relationship between Autistic Traits and Nutrient Intake among Japanese Children and Adolescents (2020, Nutrients)
  • Quantum chemical studies on hydrogen bonds in helical secondary structures (2022, Biophysical Reviews)
  • Real-time personal healthcare data analysis using edge computing for multimodal wearable sensors (2024, Device)
  • Molecular Interaction Mechanism of a 14-3-3 Protein with a Phosphorylated Peptide Elucidated by Enhanced Conformational Sampling (2020, Journal of Chemical Information and Modeling)

Nakamura frequently collaborates with several coauthors, underscoring interdisciplinary teamwork. Frequent collaborators include:

  • Hiromasa Tsujiguchi
  • Thao Thi Thu Nguyen
  • Akinori Hara
  • Sakae Miyagi
  • Yukari Shimizu

Their publication venues concentrate in journals that focus on biophysics, chemical information, and nutritional science. Key venues are:

  • Biophysics and Physicobiology (11 publications)
  • Biophysical Reviews (10 publications)
  • Scientific Reports (3 publications)
  • Nutrients (3 publications)
  • Research Square (3 publications)

Nakamura's research topics address complex biochemical and biophysical phenomena as well as technological applications. The main focus areas include:

  • Protein Structure and Dynamics
  • Environmental Monitoring and Data Management
  • Mass Spectrometry Techniques and Applications
  • Advanced Chemical Physics Studies
  • Advanced Sensor and Energy Harvesting Materials
  • Computational Drug Discovery Methods
  • Chemical Synthesis and Analysis

This body of work reflects a multidisciplinary approach integrating molecular biology concepts with advanced sensor technologies and computational methods suitable for both fundamental understanding and practical healthcare applications.

Best Publications

  • Announcing the worldwide Protein Data Bank.

    Helen Berman;Kim Henrick;Haruki Nakamura

  • The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data

    Helen M. Berman;Kim Henrick;Haruki Nakamura;John L. Markley

  • Protein Data Bank: the single global archive for 3D macromolecular structure data

    Stephen K Burley;Helen M Berman;Charmi Bhikadiya

  • Protein Data Bank (PDB): The Single Global Macromolecular Structure Archive.

    Stephen K. Burley;Stephen K. Burley;Helen M. Berman;Gerard J. Kleywegt;John L. Markley

  • Zc3h12a is an RNase essential for controlling immune responses by regulating mRNA decay.

    Kazufumi Matsushita;Osamu Takeuchi;Daron M. Standley;Yutaro Kumagai

  • Solution structure of a specific DNA complex of the Myb DNA-binding domain with cooperative recognition helices.

    Kazuhiro Ogata;Souichi Morikawa;Haruki Nakamura;Ai Sekikawa

  • Roles of electrostatic interaction in proteins.

    Haruki Nakamura

  • The cavity in the hydrophobic core of Myb DNA-binding domain is reserved for DNA recognition and trans-activation.

    Kazuhiro Ogata;Chie Kanei-Ishii;Motoko Sasaki;Hideki Hatanaka

  • Atomic structure of the RuvC resolvase: A holliday junction-specific endonuclease from E. coli

    Mariko Ariyoshi;Dmitry G. Vassylyev;Hiroshi Iwasaki;Haruki Nakamura

  • Solution structure of a DNA-binding unit of Myb: a helix-turn-helix-related motif with conserved tryptophans forming a hydrophobic core.

    Kazuhiro Ogata;Hironobu Hojo;Saburo Aimoto;Takahisa Nakai

  • An effective solvation term based on atomic occupancies for use in protein simulations

    Pieter F. W. Stouten;Cornelius Frömmel;Haruki Nakamura;Chris Sander

  • Disordered domains and high surface charge confer hubs with the ability to interact with multiple proteins in interaction networks.

    Ashwini Patil;Haruki Nakamura

  • Computer-aided antibody design.

    Daisuke Kuroda;Hiroki Shirai;Matthew P. Jacobson;Haruki Nakamura

  • Segmental isotope labeling for protein NMR using peptide splicing

    Toshio Yamazaki;Takanori Otomo;Natsuko Oda;Yoshimasa Kyogoku

  • How does RNase H recognize a DNA.RNA hybrid

    H Nakamura;Y Oda;S Iwai;H Inoue

  • Structural details of ribonuclease H from Escherichia coli as refined to an atomic resolution.

    K. Katayanagi;M. Miyagawa;M. Matsushima;M. Ishikawa

  • Structural classification of CDR-H3 in antibodies

    Hiroki Shirai;Akinori Kidera;Haruki Nakamura

  • Validation of Structures in the Protein Data Bank

    Swanand Gore;Eduardo Sanz García;Pieter M.S. Hendrickx;Aleksandras Gutmanas

  • Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.

    Kazuhiro Ogata;Souichi Morikawa;Haruki Nakamura;Hironobu Hojo

  • H3-rules: identification of CDR-H3 structures in antibodies.

    Hiroki Shirai;Akinori Kidera;Haruki Nakamura

Frequent Co-Authors

Kengo Kinoshita
Kengo Kinoshita Tohoku University
Helen M. Berman
Helen M. Berman Rutgers, The State University of New Jersey
John L. Markley
John L. Markley University of Wisconsin–Madison
Kizashi Yamaguchi
Kizashi Yamaguchi Osaka University
Gerard J. Kleywegt
Gerard J. Kleywegt European Bioinformatics Institute
Stephen K. Burley
Stephen K. Burley Rutgers, The State University of New Jersey
Yoshifumi Nishimura
Yoshifumi Nishimura Hiroshima University
Mitsutaka Okumura
Mitsutaka Okumura Osaka University
Shigenori Kanaya
Shigenori Kanaya Osaka University
Sameer Velankar
Sameer Velankar European Bioinformatics Institute

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