H-Index & Metrics Best Publications

H-Index & Metrics

Discipline name H-index Citations Publications World Ranking National Ranking
Computer Science D-index 33 Citations 10,818 87 World Ranking 6529 National Ranking 286

Overview

What is he best known for?

The fields of study he is best known for:

  • Algorithm
  • Artificial intelligence
  • Gene

Bin Ma mainly focuses on Computational biology, Genetics, Genome, Combinatorics and Algorithm. As a member of one scientific family, he mostly works in the field of Computational biology, focusing on Homology and, on occasion, Sequence homology and Chromosome. Bin Ma mostly deals with Genomics in his studies of Genome.

His work in Combinatorics addresses issues such as Closest string, which are connected to fields such as Longest common substring problem, Approximate string matching and Longest repeated substring problem. The concepts of his Algorithm study are interwoven with issues in String-to-string correction problem and Nearest neighbor search. His study in Reference genome is interdisciplinary in nature, drawing from both Genome evolution, Synteny, Human genome and Comparative genomics.

His most cited work include:

  • Initial sequencing and comparative analysis of the mouse genome. (5789 citations)
  • Genome sequence of the Brown Norway rat yields insights into mammalian evolution (1795 citations)
  • Clustering by compression (948 citations)

What are the main themes of his work throughout his whole career to date?

His primary areas of study are Combinatorics, Computational biology, Algorithm, Tandem mass spectrometry and Closest string. Bin Ma interconnects Discrete mathematics and Substring in the investigation of issues within Combinatorics. His studies deal with areas such as Genetics, Bioinformatics, De novo sequencing, Genome and Homology as well as Computational biology.

His Genome study focuses on Genomics in particular. His Algorithm research incorporates elements of Sequence, Nearest neighbor search and Mathematical optimization. His Tandem mass spectrometry study combines topics from a wide range of disciplines, such as Sequence, Peptide sequence and Glycan.

He most often published in these fields:

  • Combinatorics (25.78%)
  • Computational biology (24.22%)
  • Algorithm (18.75%)

What were the highlights of his more recent work (between 2014-2020)?

  • Mass spectrometry (10.16%)
  • Computational biology (24.22%)
  • Tandem mass spectrometry (16.41%)

In recent papers he was focusing on the following fields of study:

The scientist’s investigation covers issues in Mass spectrometry, Computational biology, Tandem mass spectrometry, Artificial intelligence and Pattern recognition. In general Mass spectrometry, his work in Ms ms spectra is often linked to Database search engine, Peptide and Chymotrypsin linking many areas of study. Bin Ma has included themes like Biotechnology and Genome, Bacterial genome size in his Computational biology study.

His Tandem mass spectrometry study combines topics in areas such as De novo sequencing, Glycosylation and Glycan. His study looks at the relationship between De novo sequencing and topics such as Biological system, which overlap with Protein methods and Proteomics methods. His study in the fields of Deep learning under the domain of Artificial intelligence overlaps with other disciplines such as Data-independent acquisition, Data dependent, Proteomics and Supervised learning.

Between 2014 and 2020, his most popular works were:

  • Novor: real-time peptide de novo sequencing software. (103 citations)
  • An automated Genomes-to-Natural Products platform (GNP) for the discovery of modular natural products (77 citations)
  • Prediction of LC-MS/MS Properties of Peptides from Sequence by Deep Learning. (19 citations)

In his most recent research, the most cited papers focused on:

  • Algorithm
  • Artificial intelligence
  • Gene

Bin Ma mostly deals with Computational biology, Biotechnology, Tandem mass spectrometry, Nonribosomal peptide and Chemical diversity. His Computational biology research is multidisciplinary, incorporating elements of Sequence database, Ms ms spectra and Quantitative proteomics. His research in Biotechnology intersects with topics in Genome and Bacterial genome size.

He combines Tandem mass spectrometry and Search algorithm in his studies.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

Initial sequencing and comparative analysis of the mouse genome.

Robert H. Waterston;Kerstin Lindblad-Toh;Ewan Birney;Jane Rogers.
Nature (2002)

7302 Citations

Genome sequence of the Brown Norway rat yields insights into mammalian evolution

Richard A. Gibbs;George M. Weinstock;Michael L. Metzker;Donna M. Muzny.
Nature (2004)

2192 Citations

The similarity metric

Ming Li;Xin Chen;Xin Li;Bin Ma.
IEEE Transactions on Information Theory (2004)

1212 Citations

PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry

Bin Ma;Kaizhong Zhang;Christopher Hendrie;Chengzhi Liang.
Rapid Communications in Mass Spectrometry (2003)

1181 Citations

PatternHunter: faster and more sensitive homology search

Bin Ma;John Tromp;Ming Li.
Bioinformatics (2002)

989 Citations

Clustering by compression

Ming Li;Xin Chen;Xin Li;Bin Ma.
international symposium on information theory (2003)

894 Citations

PEAKS DB: De Novo Sequencing Assisted Database Search for Sensitive and Accurate Peptide Identification

Jing Zhang;Lei Xin;Baozhen Shan;Weiwu Chen.
Molecular & Cellular Proteomics (2012)

758 Citations

ZOOM! Zillions of oligos mapped

Hao Lin;Zefeng Zhang;Michael Q. Zhang;Bin Ma.
Bioinformatics (2008)

300 Citations

Patternhunter II: highly sensitive and fast homology search.

Ming Li;Bin Ma;Derek Kisman;John Tromp.
Journal of Bioinformatics and Computational Biology (2004)

293 Citations

Distinguishing string selection problems

J. Kevin Lanctot;Ming Li;Bin Ma;Shaojiu Wang.
Information & Computation (2003)

292 Citations

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Ross C. Hardison

Pennsylvania State University

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Kerstin Lindblad-Toh

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Ewan Birney

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