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Yijun Ruan

D-Index & Metrics

Discipline name D-Index World Ranking Current World Ranking National Ranking Current National Ranking Publications Citations
Genetics 83 1382 1310 654 614 190 66404

Yijun Ruan publications per year

The chart shows the history of publications by Yijun Ruan between 1994 and 2025, highlighting the no. of papers published in each year and offering an overview of the publication velocity of this scholar. Yijun Ruan published across 32 years, from 1994 to 2025, averaging 7 papers a year. Output peaked at 20 publications in 2012. 12 of the 224 publications appeared in the last two years.

No. of publications
5 10 15 20
Bar chart. Horizontal axis: year, 1994 to 2025. Vertical axis: number of publications, 0 to 20. Peak 20 publications in 2012. 1994: 2 publications 1995: 1 publication 1996: 2 publications 1997: 0 publications 1998: 0 publications 1999: 0 publications 2000: 0 publications 2001: 0 publications 2002: 0 publications 2003: 1 publication 2004: 10 publications 2005: 6 publications 2006: 9 publications 2007: 15 publications 2008: 13 publications 2009: 8 publications 2010: 12 publications 2011: 14 publications 2012: 20 publications 2013: 5 publications 2014: 10 publications 2015: 8 publications 2016: 10 publications 2017: 5 publications 2018: 11 publications 2019: 11 publications 2020: 14 publications 2021: 7 publications 2022: 12 publications 2023: 6 publications 2024: 5 publications 2025: 7 publications
1994 2025

224 publications in total across all disciplines

View publications per year as a table
Yijun Ruan: publications per year, 1994 to 2025
Year Publications
1994 2
1995 1
1996 2
1997 0
1998 0
1999 0
2000 0
2001 0
2002 0
2003 1
2004 10
2005 6
2006 9
2007 15
2008 13
2009 8
2010 12
2011 14
2012 20
2013 5
2014 10
2015 8
2016 10
2017 5
2018 11
2019 11
2020 14
2021 7
2022 12
2023 6
2024 5
2025 7
Total 224
Download as CSV

Yijun Ruan publication distribution in Genetics in 2026

The chart shows the distribution of publications by all Research.com ranked scientists in the field of Genetics in 2026. The highlighted bar marks where Yijun Ruan sits on this spectrum.

No. of scientists
50 100 150 200
Bar chart with 67 bars. Horizontal axis: publications, 45–54 to 703+. Vertical axis: number of scientists, 0 to 217. Most scientists, 217, have 125–134 publications. The last bar groups every scientist with 703 publications or more. The highlighted bar, 185–194 publications, is where this scientist sits. 45–54 publications: 6 scientists 55–64 publications: 10 scientists 65–74 publications: 35 scientists 75–84 publications: 84 scientists 85–94 publications: 102 scientists 95–104 publications: 151 scientists 105–114 publications: 175 scientists 115–124 publications: 203 scientists 125–134 publications: 217 scientists 135–144 publications: 205 scientists 145–154 publications: 193 scientists 155–164 publications: 188 scientists 165–174 publications: 170 scientists 175–184 publications: 178 scientists 185–194 publications: 164 scientists 195–204 publications: 173 scientists 205–214 publications: 159 scientists 215–224 publications: 134 scientists 225–234 publications: 143 scientists 235–244 publications: 105 scientists 245–254 publications: 114 scientists 255–264 publications: 92 scientists 265–274 publications: 88 scientists 275–284 publications: 87 scientists 285–294 publications: 80 scientists 295–304 publications: 62 scientists 305–314 publications: 75 scientists 315–324 publications: 67 scientists 325–334 publications: 60 scientists 335–344 publications: 52 scientists 345–354 publications: 40 scientists 355–364 publications: 48 scientists 365–374 publications: 47 scientists 375–384 publications: 46 scientists 385–394 publications: 31 scientists 395–404 publications: 27 scientists 405–414 publications: 40 scientists 415–424 publications: 30 scientists 425–434 publications: 43 scientists 435–444 publications: 29 scientists 445–454 publications: 14 scientists 455–464 publications: 28 scientists 465–474 publications: 21 scientists 475–484 publications: 21 scientists 485–494 publications: 22 scientists 495–504 publications: 17 scientists 505–514 publications: 12 scientists 515–524 publications: 11 scientists 525–534 publications: 8 scientists 535–544 publications: 8 scientists 545–554 publications: 14 scientists 555–564 publications: 4 scientists 565–574 publications: 11 scientists 575–584 publications: 5 scientists 585–594 publications: 11 scientists 595–604 publications: 12 scientists 605–614 publications: 7 scientists 615–624 publications: 6 scientists 625–634 publications: 10 scientists 635–644 publications: 9 scientists 645–654 publications: 10 scientists 655–664 publications: 6 scientists 665–674 publications: 6 scientists 675–684 publications: 6 scientists 685–694 publications: 4 scientists 695–702 publications: 6 scientists 703+ publications: 100 scientists
45–54 publications 703+

This scientist: 190 publications — 46th percentile

46% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 703 publications or more.

View publications distribution as a table
Number of Genetics scientists by publication count, Research.com 2026 ranking edition. Based on 4,342 ranked scientists.
Publications Scientists This scientist
45–54 6
55–64 10
65–74 35
75–84 84
85–94 102
95–104 151
105–114 175
115–124 203
125–134 217
135–144 205
145–154 193
155–164 188
165–174 170
175–184 178
185–194 164 190
195–204 173
205–214 159
215–224 134
225–234 143
235–244 105
245–254 114
255–264 92
265–274 88
275–284 87
285–294 80
295–304 62
305–314 75
315–324 67
325–334 60
335–344 52
345–354 40
355–364 48
365–374 47
375–384 46
385–394 31
395–404 27
405–414 40
415–424 30
425–434 43
435–444 29
445–454 14
455–464 28
465–474 21
475–484 21
485–494 22
495–504 17
505–514 12
515–524 11
525–534 8
535–544 8
545–554 14
555–564 4
565–574 11
575–584 5
585–594 11
595–604 12
605–614 7
615–624 6
625–634 10
635–644 9
645–654 10
655–664 6
665–674 6
675–684 6
685–694 4
695–702 6
703+ 100
Download as CSV

Yijun Ruan D-index placement in Genetics in 2026

The chart shows the D-index (discipline H-index) distribution of Genetics scientists ranked by Research.com in 2026. The highlighted bar marks where Yijun Ruan sits on this spectrum.

No. of scientists
50 100 150
Bar chart with 61 bars. Horizontal axis: D-Index, 40–41 to 160+. Vertical axis: number of scientists, 0 to 191. Most scientists, 191, have 62–63 D-Index. The last bar groups every scientist with 160 D-Index or more. The highlighted bar, 82–83 D-Index, is where this scientist sits. 40–41 D-Index: 24 scientists 42–43 D-Index: 52 scientists 44–45 D-Index: 84 scientists 46–47 D-Index: 112 scientists 48–49 D-Index: 118 scientists 50–51 D-Index: 141 scientists 52–53 D-Index: 143 scientists 54–55 D-Index: 145 scientists 56–57 D-Index: 179 scientists 58–59 D-Index: 162 scientists 60–61 D-Index: 175 scientists 62–63 D-Index: 191 scientists 64–65 D-Index: 172 scientists 66–67 D-Index: 184 scientists 68–69 D-Index: 164 scientists 70–71 D-Index: 158 scientists 72–73 D-Index: 150 scientists 74–75 D-Index: 136 scientists 76–77 D-Index: 127 scientists 78–79 D-Index: 127 scientists 80–81 D-Index: 111 scientists 82–83 D-Index: 110 scientists 84–85 D-Index: 110 scientists 86–87 D-Index: 84 scientists 88–89 D-Index: 102 scientists 90–91 D-Index: 66 scientists 92–93 D-Index: 72 scientists 94–95 D-Index: 70 scientists 96–97 D-Index: 54 scientists 98–99 D-Index: 60 scientists 100–101 D-Index: 49 scientists 102–103 D-Index: 55 scientists 104–105 D-Index: 45 scientists 106–107 D-Index: 42 scientists 108–109 D-Index: 28 scientists 110–111 D-Index: 39 scientists 112–113 D-Index: 25 scientists 114–115 D-Index: 31 scientists 116–117 D-Index: 29 scientists 118–119 D-Index: 34 scientists 120–121 D-Index: 29 scientists 122–123 D-Index: 29 scientists 124–125 D-Index: 18 scientists 126–127 D-Index: 27 scientists 128–129 D-Index: 22 scientists 130–131 D-Index: 16 scientists 132–133 D-Index: 11 scientists 134–135 D-Index: 17 scientists 136–137 D-Index: 12 scientists 138–139 D-Index: 21 scientists 140–141 D-Index: 4 scientists 142–143 D-Index: 9 scientists 144–145 D-Index: 14 scientists 146–147 D-Index: 6 scientists 148–149 D-Index: 10 scientists 150–151 D-Index: 7 scientists 152–153 D-Index: 9 scientists 154–155 D-Index: 8 scientists 156–157 D-Index: 8 scientists 158–159 D-Index: 9 scientists 160+ D-Index: 96 scientists
40–41 D-Index 160+

This scientist: 83 D-Index — 68th percentile

68% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 160 D-Index or more.

View D-Index distribution as a table
Number of Genetics scientists by D-index, Research.com 2026 ranking edition. Based on 4,342 ranked scientists.
D-Index Scientists This scientist
40–41 24
42–43 52
44–45 84
46–47 112
48–49 118
50–51 141
52–53 143
54–55 145
56–57 179
58–59 162
60–61 175
62–63 191
64–65 172
66–67 184
68–69 164
70–71 158
72–73 150
74–75 136
76–77 127
78–79 127
80–81 111
82–83 110 83
84–85 110
86–87 84
88–89 102
90–91 66
92–93 72
94–95 70
96–97 54
98–99 60
100–101 49
102–103 55
104–105 45
106–107 42
108–109 28
110–111 39
112–113 25
114–115 31
116–117 29
118–119 34
120–121 29
122–123 29
124–125 18
126–127 27
128–129 22
130–131 16
132–133 11
134–135 17
136–137 12
138–139 21
140–141 4
142–143 9
144–145 14
146–147 6
148–149 10
150–151 7
152–153 9
154–155 8
156–157 8
158–159 9
160+ 96
Download as CSV

Overview

Yijun Ruan is affiliated with the University of Connecticut Health Center in the United States and has a research focus primarily in biochemistry, genetics, and molecular biology.

The scientist has an extensive publication record, with 84 works in the field of biochemistry, genetics, and molecular biology. Subfields of study include molecular biology, genetics, immunology, plant science, and cancer research.

Yijun Ruan's research covers various topics, notably genomics and chromatin dynamics, RNA research and splicing, epigenetics and DNA methylation, RNA and protein synthesis mechanisms, chromosomal and genetic variations, genomic variations and chromosomal abnormalities, and single-cell and spatial transcriptomics.

Their recent papers include:

  • Oncogenic extrachromosomal DNA functions as mobile enhancers to globally amplify chromosomal transcription (2021, Cancer Cell)
  • A supervised learning framework for chromatin loop detection in genome-wide contact maps (2020, Nature Communications)
  • Multidimensional single-cell analysis of human peripheral blood reveals characteristic features of the immune system landscape in aging and frailty (2022, Nature Aging)
  • Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project (2023, Molecular Cell)
  • Graph embedding and unsupervised learning predict genomic sub-compartments from HiC chromatin interaction data (2020, Nature Communications)

Frequent co-authors of Yijun Ruan include:

  • Dariusz Plewczyński
  • Byoungkoo Lee
  • Xiaoan Ruan
  • Minji Kim
  • Chia-Lin Wei

The scientist has published extensively in several venues, with the most frequent being ENCODE Datasets, Nature Communications, bioRxiv (Cold Spring Harbor Laboratory), Science Advances, and Scientific Reports.

Best Publications

  • Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

    Ewan Birney;John A. Stamatoyannopoulos;Anindya Dutta;Roderic Guigó

  • Landscape of transcription in human cells

    Sarah Djebali;Carrie A. Davis;Angelika Merkel;Alex Dobin

  • The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression.

    Thomas Derrien;Rory Johnson;Giovanni Bussotti;Andrea Tanzer

  • The Transcriptional Landscape of the Mammalian Genome

    P. Carninci;T. Kasukawa;S. Katayama;J. Gough

  • Integration of External Signaling Pathways with the Core Transcriptional Network in Embryonic Stem Cells

    Xi Chen;Han Xu;Ping Yuan;Fang Fang;Fang Fang

  • The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells.

    Yuin Han Loh;Qiang Wu;Joon Lin Chew;Joon Lin Chew;Vinsensius B. Vega

  • An integrated encyclopedia of DNA elements in the human genome

    Ian Dunham;Anshul Kundaje;Shelley F. Aldred;Patrick J. Collins

  • International network of cancer genome projects

    Thomas J. Hudson;Thomas J. Hudson;Warwick Anderson;Axel Aretz;Anna D. Barker

  • An oestrogen-receptor-α-bound human chromatin interactome

    Melissa J. Fullwood;Mei Hui Liu;You Fu Pan;Jun Liu

  • A User's Guide to the Encyclopedia of DNA Elements (ENCODE)

    Richard M. Myers;John Stamatoyannopoulos;Michael Snyder;Ian Dunham

  • A global map of p53 transcription-factor binding sites in the human genome.

    Chia-Lin Wei;Qiang Wu;Vinsensius B. Vega;Kuo Ping Chiu

  • Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation.

    Guoliang Li;Xiaoan Ruan;Raymond K. Auerbach;Kuljeet Singh Sandhu

  • The draft genome of sweet orange (Citrus sinensis).

    Qiang Xu;Ling Ling Chen;Xiaoan Ruan;Dijun Chen

  • Functional metagenomic profiling of nine biomes

    Elizabeth A. Dinsdale;Robert A. Edwards;Dana Hall;Florent Angly

  • CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription.

    Zhonghui Tang;Oscar Junhong Luo;Xingwang Li;Meizhen Zheng

  • RNA Viral Community in Human Feces: Prevalence of Plant Pathogenic Viruses

    Tao Zhang;Mya Breitbart;Wah Heng Lee;Jin-Quan Run

  • Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells

    Stefan Schoenfelder;Tom Sexton;Lyubomira Chakalova;Nathan F Cope

  • CTCF-mediated functional chromatin interactome in pluripotent cells

    Lusy Handoko;Han Xu;Guoliang Li;Chew Yee Ngan

  • Comparative full-length genome sequence analysis of 14 SARS coronavirus isolates and common mutations associated with putative origins of infection

    Yijun Ruan;Chia Lin Wei;Ai Ee Ling;Vinsensius B Vega

  • Exome sequencing of gastric adenocarcinoma identifies recurrent somatic mutations in cell adhesion and chromatin remodeling genes

    Zhi Jiang Zang;Ioana Cutcutache;Song Ling Poon;Shen Li Zhang

Frequent Co-Authors

Chia-Lin Wei
Chia-Lin Wei Lawrence Berkeley National Laboratory
Wing-Kin Sung
Wing-Kin Sung Chinese University of Hong Kong
Edison T. Liu
Edison T. Liu The Jackson Laboratory
Axel M. Hillmer
Axel M. Hillmer University of Cologne
Patrick Tan
Patrick Tan Duke NUS Graduate Medical School
Guillaume Bourque
Guillaume Bourque McGill University
Huck-Hui Ng
Huck-Hui Ng Genome Institute of Singapore
Thomas R. Gingeras
Thomas R. Gingeras Cold Spring Harbor Laboratory
Mark Gerstein
Mark Gerstein Yale University
Niranjan Nagarajan
Niranjan Nagarajan Genome Institute of Singapore

External Links

Personal website of Yijun Ruan

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Best Scientists Citing Yijun Ruan

Piero Carninci

Piero Carninci

RIKEN

Publications: 172

Yoshihide Hayashizaki

Yoshihide Hayashizaki

RIKEN

Publications: 126

Michael Snyder

Michael Snyder

Stanford University

Publications: 125

Bing Ren

Bing Ren

New York Genome Center

Publications: 123

John S. Mattick

John S. Mattick

University of New South Wales

Publications: 118

Mark Gerstein

Mark Gerstein

Yale University

Publications: 110

Eric S. Lander

Eric S. Lander

Broad Institute

Publications: 106

John L. Rinn

John L. Rinn

University of Colorado Boulder

Publications: 105

Manolis Kellis

Manolis Kellis

MIT

Publications: 103

Michael Q. Zhang

Michael Q. Zhang

The University of Texas at Dallas

Publications: 94

Job Dekker

Job Dekker

University of Massachusetts Chan Medical School

Publications: 85

Roderic Guigó

Roderic Guigó

Pompeu Fabra University

Publications: 82

Marcel E. Dinger

Marcel E. Dinger

University of Sydney

Publications: 79

Paul Flicek

Paul Flicek

The Jackson Laboratory

Publications: 78

Huck-Hui Ng

Huck-Hui Ng

Genome Institute of Singapore

Publications: 78

Thomas R. Gingeras

Thomas R. Gingeras

Cold Spring Harbor Laboratory

Publications: 72

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