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D-Index & Metrics

Biology and Biochemistry

D-Index
53
Citations
14026
World Ranking
15977
National Ranking
386

Overview

Matthias Heinemann is affiliated with the University of Groningen in the Netherlands. Their research primarily falls within the broad domain of Biochemistry, Genetics, and Molecular Biology, with a significant focus on Molecular Biology, Genetics, and Plant Science. Additional expertise covers Ecology and Endocrinology.

The scientist's recent publications highlight a multi-dimensional approach to microbial and cellular processes. Key topics of their research include Microbial Metabolic Engineering and Bioproduction, Bacterial Genetics and Biotechnology, RNA and protein synthesis mechanisms, as well as Fungal and yeast genetics research. Other notable areas are Gene Regulatory Network Analysis, Bacteriophages and microbial interactions, and Metabolomics and Mass Spectrometry Studies.

Recent papers authored or co-authored by Matthias Heinemann include:

  • Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices (2021, Nature Methods)
  • Physical bioenergetics: Energy fluxes, budgets, and constraints in cells (2021, Proceedings of the National Academy of Sciences)
  • Improving photosynthetic efficiency toward food security: Strategies, advances, and perspectives (2023, Molecular Plant)
  • Mutations in respiratory complex I promote antibiotic persistence through alterations in intracellular acidity and protein synthesis (2022, Nature Communications)
  • A New Sugar for an Old Phage: a c-di-GMP-Dependent Polysaccharide Pathway Sensitizes Escherichia coli for Bacteriophage Infection (2021, mBio)

Frequent co-authors collaborating with Matthias Heinemann include Edward Smith, José Losa, Silke R. Vedelaar, Andreas Milias-Argeitis, and Hanna M. Terpstra, reflecting ongoing partnerships in research projects.

The scientist's work has been published in a variety of venues, with notable recurring contributions to bioRxiv, Nature Communications, Molecular Systems Biology, Molecular Biology of the Cell, and Nature Methods.

Best Publications

  • Definitions and guidelines for research on antibiotic persistence

    Naomi N.Q. Balaban;Sophie Helaine;Kim Lewis;Martin Ackermann;Martin Ackermann

  • Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices

    Saleh Alseekh;Asaph Aharoni;Yariv Brotman;Kevin Contrepois

  • The quantitative and condition-dependent Escherichia coli proteome.

    Alexander Schmidt;Karl Kochanowski;Silke Vedelaar;Erik Ahrné

  • A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology

    Markus Herrgard;Neil Swainston;Paul Dobson;Warwick B. Dunn

  • Multidimensional optimality of microbial metabolism

    Robert Schuetz;Nicola Zamboni;Mattia Zampieri;Matthias Heinemann

  • Synthetic biology---putting engineering into biology

    Matthias Heinemann;Sven Panke

  • Condition-dependent cell volume and concentration of Escherichia coli to facilitate data conversion for systems biology modeling.

    Benjamin Volkmer;Matthias Heinemann

  • From good old biochemical analyses to high-throughput omics measurements and back.

    Matthias Heinemann;Uwe Sauer

  • Genetics. Getting closer to the whole picture.

    Uwe Sauer;Matthias Heinemann;Nicola Zamboni

  • Putative regulatory sites unraveled by network-embedded thermodynamic analysis of metabolome data

    Anne Kümmel;Sven Panke;Matthias Heinemann

  • Bacterial adaptation through distributed sensing of metabolic fluxes

    Oliver Kotte;Judith B Zaugg;Matthias Heinemann;Matthias Heinemann

  • The cost of virulence: retarded growth of Salmonella Typhimurium cells expressing type III secretion system 1

    Alexander Sturm;Matthias Heinemann;Markus Arnoldini;Arndt Benecke

  • Phenotypic bistability in Escherichia coli's central carbon metabolism

    Oliver Kotte;Benjamin Volkmer;Jakub L Radzikowski;Matthias Heinemann;Matthias Heinemann

  • Physiology of mycobacteria.

    Gregory M. Cook;Michael Berney;Susanne Gebhard;Matthias Heinemann

  • Mass spectrometry-based metabolomics of single yeast cells

    Alfredo J. Ibáñez;Stephan R. Fagerer;Anna Mareike Schmidt;Pawel L. Urban

  • Whole lifespan microscopic observation of budding yeast aging through a microfluidic dissection platform

    Sung Sik Lee;Ima Avalos Vizcarra;Daphne H E W Huberts;Luke P Lee;Luke P Lee

  • Prediction of microbial growth rate versus biomass yield by a metabolic network with kinetic parameters.

    Roi Adadi;Benjamin Volkmer;Ron Milo;Matthias Heinemann

  • Functioning of a metabolic flux sensor in Escherichia coli

    Karl Kochanowski;Benjamin Volkmer;Luca Gerosa;Bart R Haverkorn van Rijsewijk

  • Systematic assignment of thermodynamic constraints in metabolic network models

    Anne Kümmel;Sven Panke;Matthias Heinemann

  • Bacterial persistence is an active σS stress response to metabolic flux limitation

    Jakub Leszek Radzikowski;Silke Vedelaar;David Siegel;Álvaro Dario Ortega

Frequent Co-Authors

Uwe Sauer
Uwe Sauer ETH Zurich
Jochen Büchs
Jochen Büchs RWTH Aachen University
Alexander Schmidt
Alexander Schmidt University of Basel
Nicola Zamboni
Nicola Zamboni ETH Zurich
Luke P. Lee
Luke P. Lee University of California, Berkeley
Renato Zenobi
Renato Zenobi ETH Zurich

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