World's Best Scientists 2026 revealed!

D-Index & Metrics

Genetics

D-Index
66
Citations
31194
World Ranking
2568
National Ranking
1

Julio Collado-Vides publication distribution in Genetics in 2026

The chart shows the distribution of publications by all Research.com ranked scientists in the field of Genetics in 2026. The highlighted bar marks where Julio Collado-Vides sits on this spectrum.

45–54 publications: 6 scientists 55–64 publications: 10 scientists 65–74 publications: 35 scientists 75–84 publications: 84 scientists 85–94 publications: 102 scientists 95–104 publications: 151 scientists 105–114 publications: 175 scientists 115–124 publications: 203 scientists 125–134 publications: 217 scientists 135–144 publications: 205 scientists 145–154 publications: 193 scientists 155–164 publications: 188 scientists 165–174 publications: 170 scientists 175–184 publications: 178 scientists 185–194 publications: 164 scientists 195–204 publications: 173 scientists 205–214 publications: 159 scientists 215–224 publications: 134 scientists 225–234 publications: 143 scientists 235–244 publications: 105 scientists 245–254 publications: 114 scientists 255–264 publications: 92 scientists 265–274 publications: 88 scientists 275–284 publications: 87 scientists 285–294 publications: 80 scientists 295–304 publications: 62 scientists 305–314 publications: 75 scientists 315–324 publications: 67 scientists 325–334 publications: 60 scientists 335–344 publications: 52 scientists 345–354 publications: 40 scientists 355–364 publications: 48 scientists 365–374 publications: 47 scientists 375–384 publications: 46 scientists 385–394 publications: 31 scientists 395–404 publications: 27 scientists 405–414 publications: 40 scientists 415–424 publications: 30 scientists 425–434 publications: 43 scientists 435–444 publications: 29 scientists 445–454 publications: 14 scientists 455–464 publications: 28 scientists 465–474 publications: 21 scientists 475–484 publications: 21 scientists 485–494 publications: 22 scientists 495–504 publications: 17 scientists 505–514 publications: 12 scientists 515–524 publications: 11 scientists 525–534 publications: 8 scientists 535–544 publications: 8 scientists 545–554 publications: 14 scientists 555–564 publications: 4 scientists 565–574 publications: 11 scientists 575–584 publications: 5 scientists 585–594 publications: 11 scientists 595–604 publications: 12 scientists 605–614 publications: 7 scientists 615–624 publications: 6 scientists 625–634 publications: 10 scientists 635–644 publications: 9 scientists 645–654 publications: 10 scientists 655–664 publications: 6 scientists 665–674 publications: 6 scientists 675–684 publications: 6 scientists 685–694 publications: 4 scientists 695–702 publications: 6 scientists 703+ publications: 100 scientists
45 publications 703+

This scientist: 167 publications — 37th percentile

37% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 703 publications or more.

Julio Collado-Vides D-index placement in Genetics in 2026

The chart shows the D-index (discipline H-index) distribution of Genetics scientists ranked by Research.com in 2026. The highlighted bar marks where Julio Collado-Vides sits on this spectrum.

40–41 D-Index: 24 scientists 42–43 D-Index: 52 scientists 44–45 D-Index: 84 scientists 46–47 D-Index: 112 scientists 48–49 D-Index: 118 scientists 50–51 D-Index: 141 scientists 52–53 D-Index: 143 scientists 54–55 D-Index: 145 scientists 56–57 D-Index: 179 scientists 58–59 D-Index: 162 scientists 60–61 D-Index: 175 scientists 62–63 D-Index: 191 scientists 64–65 D-Index: 172 scientists 66–67 D-Index: 184 scientists 68–69 D-Index: 164 scientists 70–71 D-Index: 158 scientists 72–73 D-Index: 150 scientists 74–75 D-Index: 136 scientists 76–77 D-Index: 127 scientists 78–79 D-Index: 127 scientists 80–81 D-Index: 111 scientists 82–83 D-Index: 110 scientists 84–85 D-Index: 110 scientists 86–87 D-Index: 84 scientists 88–89 D-Index: 102 scientists 90–91 D-Index: 66 scientists 92–93 D-Index: 72 scientists 94–95 D-Index: 70 scientists 96–97 D-Index: 54 scientists 98–99 D-Index: 60 scientists 100–101 D-Index: 49 scientists 102–103 D-Index: 55 scientists 104–105 D-Index: 45 scientists 106–107 D-Index: 42 scientists 108–109 D-Index: 28 scientists 110–111 D-Index: 39 scientists 112–113 D-Index: 25 scientists 114–115 D-Index: 31 scientists 116–117 D-Index: 29 scientists 118–119 D-Index: 34 scientists 120–121 D-Index: 29 scientists 122–123 D-Index: 29 scientists 124–125 D-Index: 18 scientists 126–127 D-Index: 27 scientists 128–129 D-Index: 22 scientists 130–131 D-Index: 16 scientists 132–133 D-Index: 11 scientists 134–135 D-Index: 17 scientists 136–137 D-Index: 12 scientists 138–139 D-Index: 21 scientists 140–141 D-Index: 4 scientists 142–143 D-Index: 9 scientists 144–145 D-Index: 14 scientists 146–147 D-Index: 6 scientists 148–149 D-Index: 10 scientists 150–151 D-Index: 7 scientists 152–153 D-Index: 9 scientists 154–155 D-Index: 8 scientists 156–157 D-Index: 8 scientists 158–159 D-Index: 9 scientists 160+ D-Index: 96 scientists
40 D-Index 160+

This scientist: 66 D-Index — 41st percentile

41% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 160 D-Index or more.

Research.com Recognitions

  • 2015 - Fellow of the International Society for Computational Biology
  • 1992 - Fellow of John Simon Guggenheim Memorial Foundation

Overview

Julio Collado-Vides is affiliated with the National Autonomous University of Mexico in Mexico. Their research primarily focuses on the fields of Biochemistry, Genetics and Molecular Biology, with 44 publications recorded. Within these areas, specific subfields explored include Molecular Biology, Genetics, Pulmonary and Respiratory Medicine, Artificial Intelligence, and Information Systems and Management.

The scientist has contributed to various main topics, which include:

  • Genomics and Phylogenetic Studies
  • Bacterial Genetics and Biotechnology
  • RNA and protein synthesis mechanisms
  • Gene Regulatory Network Analysis
  • Biomedical Text Mining and Ontologies
  • Microbial Metabolic Engineering and Bioproduction
  • Bioinformatics and Genomic Networks

Julio Collado-Vides has published extensively with frequent appearances in venues such as:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Nature Reviews Genetics
  • EcoSal Plus
  • Zenodo (CERN European Organization for Nuclear Research)
  • Frontiers in Microbiology

Selected recent publications include:

  • The EcoCyc Database in 2021 (2021) in Frontiers in Microbiology
  • Redefining fundamental concepts of transcription initiation in bacteria (2020) in Nature Reviews Genetics
  • RegulonDB 11.0: Comprehensive high-throughput datasets on transcriptional regulation in Escherichia coli K-12 (2022) in Microbial Genomics
  • The EcoCyc Database (2023) in EcoSal Plus
  • RegulonDB v12.0: a comprehensive resource of transcriptional regulation in E. coli K-12 (2023) in Nucleic Acids Research

Frequent co-authors collaborating with Julio Collado-Vides include:

  • Socorro Gama-Castro
  • Víctor H. Tierrafría
  • César Bonavides-Martínez
  • Luis Muñiz-Rascado
  • Paloma Lara

The scientist has received recognition such as:

  • Fellow of the International Society for Computational Biology (2015)
  • Fellow of John Simon Guggenheim Memorial Foundation (1992)

Best Publications

  • The Complete Genome Sequence of Escherichia coli K-12

    Frederick R. Blattner;Guy Plunkett;Craig A. Bloch;Nicole T. Perna

  • Extracting Regulatory Sites from the Upstream Region of Yeast Genes by Computational Analysis of Oligonucleotide Frequencies

    J. van Helden;B. André;J. Collado-Vides

  • EcoCyc: a comprehensive database resource for Escherichia coli

    Ingrid M. Keseler;Julio Collado-Vides;Socorro Gama-Castro;John Ingraham

  • The BioPAX community standard for pathway data sharing

    Emek Demir;Emek Demir;Michael P. Cary;Suzanne Paley;Ken Fukuda

  • EcoCyc: fusing model organism databases with systems biology

    Ingrid M. Keseler;Amanda Mackie;Martín Peralta-Gil;Alberto Santos-Zavaleta

  • Minimum information requested in the annotation of biochemical models (MIRIAM)

    Nicolas Le Novère;Andrew Finney;Michael Hucka;Upinder S. Bhalla

  • Control site location and transcriptional regulation in Escherichia coli.

    J Collado-Vides;B Magasanik;J D Gralla

  • From specific gene regulation to genomic networks: a global analysis of transcriptional regulation in Escherichia coli

    Denis Thieffry;Araceli M. Huerta;Ernesto Pérez-Rueda;Julio Collado-Vides

  • Identifying global regulators in transcriptional regulatory networks in bacteria.

    Agustino Martı́nez-Antonio;Julio Collado-Vides

  • The EcoCyc Database

    Peter D. Karp;Monica Riley;Milton Saier;Ian T. Paulsen

  • RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation

    Socorro Gama-Castro;Verónica Jiménez-Jacinto;Martin Peralta-Gil;Alberto Santos-Zavaleta

  • EcoCyc: a comprehensive database of Escherichia coli biology

    Ingrid M. Keseler;Julio Collado-Vides;Alberto Santos-Zavaleta;Martín Peralta-Gil

  • The EcoCyc database: reflecting new knowledge about Escherichia coli K-12.

    Ingrid M. Keseler;Amanda Mackie;Alberto Santos-Zavaleta;Richard Billington

  • RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond

    Socorro Gama-Castro;Heladia Salgado;Alberto Santos-Zavaleta;Daniela Ledezma-Tejeida

  • RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more

    Heladia Salgado;Martín Peralta-Gil;Socorro Gama-Castro;Alberto Santos-Zavaleta

  • Operons in Escherichia coli: genomic analyses and predictions.

    Heladia Salgado;Gabriel Moreno-Hagelsieb;Temple F. Smith;Julio Collado-Vides

  • RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions

    Heladia Salgado;Socorro Gama-Castro;Martín Peralta-Gil;Edgar Díaz-Peredo

  • EcoCyc: A comprehensive view of Escherichia coli biology

    Ingrid M. Keseler;César Bonavides-Martínez;Julio Collado-Vides;Socorro Gama-Castro

  • RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units)

    Socorro Gama-Castro;Heladia Salgado;Martin Peralta-Gil;Alberto Santos-Zavaleta

  • Discovering regulatory elements in non-coding sequences by analysis of spaced dyads

    Jacques van Helden;Alma. F. Rios;Julio Collado-Vides

Frequent Co-Authors

Peter D. Karp
Peter D. Karp SRI International
Suzanne M. Paley
Suzanne M. Paley SRI International
Ian T. Paulsen
Ian T. Paulsen Macquarie University
Jacques van Helden
Jacques van Helden Aix-Marseille University
Ana Tereza Ribeiro de Vasconcelos
Ana Tereza Ribeiro de Vasconcelos National Laboratory of Scientific Computing
Denis Thieffry
Denis Thieffry École Normale Supérieure
Bernhard O. Palsson
Bernhard O. Palsson University of California, San Diego
Frederick R. Blattner
Frederick R. Blattner University of Wisconsin–Madison
Kathleen Marchal
Kathleen Marchal Ghent University
James E. Galagan
James E. Galagan Boston University

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