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Suzanne M. Paley

Suzanne M. Paley

D-Index & Metrics

Computer Science

D-Index
38
Citations
18723
World Ranking
9937
National Ranking
4175

Overview

Suzanne M. Paley is affiliated with SRI International in the United States and has contributed to the field of Biochemistry, Genetics and Molecular Biology with a focus on Molecular Biology. Their research spans several subfields including Ecology, Genetics, Biomedical Engineering, and Renewable Energy, Sustainability and the Environment.

The scientist's work centers on multiple main topics, notably:

  • Microbial Metabolic Engineering and Bioproduction
  • Bioinformatics and Genomic Networks
  • Metabolomics and Mass Spectrometry Studies
  • Genomics and Phylogenetic Studies
  • Bacterial Genetics and Biotechnology
  • RNA and protein synthesis mechanisms
  • Microbial Community Ecology and Physiology

Frequent collaborators of Suzanne M. Paley include Peter D. Karp, Ron Caspi, Markus Krummenacker, Amanda Mackie, and Anamika Kothari. These coauthors have worked with Paley on various projects and publications across their career.

The scientist has published extensively in the following venues:

  • Frontiers in Microbiology
  • bioRxiv (Cold Spring Harbor Laboratory)
  • EcoSal Plus
  • Frontiers in Bioinformatics
  • Metabolites

Among recent publications are:

  • The EcoCyc Database in 2021, published in Frontiers in Microbiology
  • Plant Metabolic Network 15: A resource of genome-wide metabolism databases for 126 plants and algae, 2021, Journal of Integrative Plant Biology
  • The EcoCyc Database (2023), EcoSal Plus
  • Revisiting the y-ome of Escherichia coli, 2024, Nucleic Acids Research
  • The BioCyc Metabolic Network Explorer, 2021, BMC Bioinformatics

Best Publications

  • The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

    Ron Caspi;Richard Billington;Luciana Ferrer;Hartmut Foerster

  • The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

    Unknown

  • The MetaCyc database of metabolic pathways and enzymes - a 2019 update.

    Ron Caspi;Richard Billington;Ingrid M. Keseler;Anamika Kothari

  • EcoCyc: a comprehensive database resource for Escherichia coli

    Ingrid M. Keseler;Julio Collado-Vides;Socorro Gama-Castro;John Ingraham

  • The BioCyc collection of microbial genomes and metabolic pathways.

    Peter D Karp;Richard Billington;Ron Caspi;Carol A Fulcher

  • The MetaCyc database of metabolic pathways and enzymes.

    Ron Caspi;Richard Billington;Carol A. Fulcher;Ingrid M. Keseler

  • The Pathway Tools software.

    Peter D. Karp;Suzanne M. Paley;Pedro Romero

  • The BioPAX community standard for pathway data sharing

    Emek Demir;Emek Demir;Michael P. Cary;Suzanne Paley;Ken Fukuda

  • EcoCyc: fusing model organism databases with systems biology

    Ingrid M. Keseler;Amanda Mackie;Martín Peralta-Gil;Alberto Santos-Zavaleta

  • Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology

    Peter D. Karp;Suzanne M. Paley;Markus Krummenacker;Mario Latendresse

  • The EcoCyc Database

    Peter D. Karp;Monica Riley;Milton Saier;Ian T. Paulsen

  • EcoCyc: a comprehensive database of Escherichia coli biology

    Ingrid M. Keseler;Julio Collado-Vides;Alberto Santos-Zavaleta;Martín Peralta-Gil

  • MetaCyc: a multiorganism database of metabolic pathways and enzymes

    Ron Caspi;Hartmut Foerster;Carol A. Fulcher;Rebecca Hopkinson

  • The EcoCyc database: reflecting new knowledge about Escherichia coli K-12.

    Ingrid M. Keseler;Amanda Mackie;Alberto Santos-Zavaleta;Richard Billington

  • The MetaCyc Database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases

    Unknown

  • The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases

    Unknown

  • EcoCyc: A comprehensive view of Escherichia coli biology

    Ingrid M. Keseler;César Bonavides-Martínez;Julio Collado-Vides;Socorro Gama-Castro

  • The MetaCyc Database

    Peter D. Karp;Monica Riley;Suzanne M. Paley;Alida Pellegrini-Toole

  • The EcoCyc and MetaCyc databases

    Peter D. Karp;Monica Riley;Milton H. Saier;Ian T. Paulsen

  • The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

    Unknown

  • Pathway Tools version 19.0 update: software for pathway/genome informatics and systems biology

    Unknown

  • MetaCyc and AraCyc. Metabolic pathway databases for plant research.

    Peifen Zhang;Hartmut Foerster;Christophe P. Tissier;Lukas Mueller

  • Pathway Tools version 23.0 update: software for pathway/genome informatics and systems biology

    Unknown

  • Integrated pathway–genome databases and their role in drug discovery

    Peter D Karp;Markus Krummenacker;Suzanne Paley;Jonathan Wagg

  • Multidimensional annotation of the Escherichia coli K-12 genome

    Peter D. Karp;Ingrid M Keseler;Alexander Glennon Shearer;Mario Latendresse

  • The EcoCyc Database in 2021.

    Ingrid M. Keseler;Socorro Gama-Castro;Amanda Mackie;Richard Billington

  • The Pathway Tools cellular overview diagram and Omics Viewer

    Suzanne M. Paley;Peter D. Karp

  • Plant Metabolic Network 15: A resource of genome-wide metabolism databases for 126 plants and algae

    Charles Hawkins;Daniel Ginzburg;Kangmei Zhao;William Dwyer

Frequent Co-Authors

Peter D. Karp
Peter D. Karp SRI International
Markus Krummenacker
Markus Krummenacker SRI International
Julio Collado-Vides
Julio Collado-Vides National Autonomous University of Mexico
Ian T. Paulsen
Ian T. Paulsen Macquarie University
Chris Sander
Chris Sander Harvard University
Robert P. Gunsalus
Robert P. Gunsalus University of California, Los Angeles
Gary D. Bader
Gary D. Bader University of Toronto
Edgar Wingender
Edgar Wingender University of Göttingen
Lukas A. Mueller
Lukas A. Mueller Boyce Thompson Institute
Peter D'Eustachio
Peter D'Eustachio New York University

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