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D-Index & Metrics

Biology and Biochemistry

D-Index
57
Citations
27275
World Ranking
13510
National Ranking
5729

Overview

Joshua E. Elias is a researcher affiliated with Stanford University in the United States. Their work primarily spans the disciplines of Biochemistry, Genetics, and Molecular Biology, with a significant focus on Medicine. Within these broader fields, their subfields of study include Molecular Biology, Spectroscopy, Immunology, Oncology, and Genetics.

The scientist's research centers on several main topics, including:

  • Advanced Proteomics Techniques and Applications
  • Gut microbiota and health
  • Ubiquitin and proteasome pathways
  • Monoclonal and Polyclonal Antibodies Research
  • Immunotherapy and Immune Responses
  • Metabolomics and Mass Spectrometry Studies
  • Vaccines and immunoinformatics approaches

Joshua E. Elias has published extensively, with frequent contributions to the following venues:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Cell
  • Nature
  • Molecular Cell
  • eLife

Highlighted recent publications include:

  • "Gut-microbiota-targeted diets modulate human immune status," 2021, Cell
  • "Physiological blood-brain transport is impaired with age by a shift in transcytosis," 2020, Nature
  • "Exercise plasma boosts memory and dampens brain inflammation via clusterin," 2021, Nature
  • "Increasing cell size remodels the proteome and promotes senescence," 2022, Molecular Cell
  • "Establishment and characterization of stable, diverse, fecal-derived in vitro microbial communities that model the intestinal microbiota," 2022, Cell Host & Microbe

Frequent collaborators in Joshua E. Elias's research include:

  • Lichao Zhang
  • Carlos G. Gonzalez
  • Frank McCarthy
  • Niclas Olsson
  • Patrick L. McAlpine

Best Publications

  • Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

    Joshua E Elias;Steven P Gygi

  • A proteomics approach to understanding protein ubiquitination

    Junmin Peng;Junmin Peng;Daniel Schwartz;Joshua E Elias;Carson C Thoreen

  • Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome.

    Junmin Peng;Joshua E. Elias;Carson C. Thoreen;Larry J. Licklider

  • A tissue-specific atlas of mouse protein phosphorylation and expression.

    Edward L. Huttlin;Mark P. Jedrychowski;Joshua E. Elias;Tapasree Goswami

  • Large-scale characterization of HeLa cell nuclear phosphoproteins.

    Sean A. Beausoleil;Mark Jedrychowski;Daniel Schwartz;Joshua E. Elias

  • Gut-microbiota-targeted diets modulate human immune status.

    Hannah C. Wastyk;Gabriela K. Fragiadakis;Dalia Perelman;Dylan Dahan

  • Seasonal cycling in the gut microbiome of the Hadza hunter-gatherers of Tanzania

    Samuel A. Smits;Jeff Leach;Erica D. Sonnenburg;Carlos G. Gonzalez

  • Comparative evaluation of mass spectrometry platforms used in large-scale proteomics investigations.

    Joshua E Elias;Wilhelm Haas;Brendan K Faherty;Steven P Gygi

  • Target-decoy search strategy for mass spectrometry-based proteomics.

    Joshua E. Elias;Steven P. Gygi

  • Genetic dissection of Flaviviridae host factors through genome-scale CRISPR screens

    Caleb D. Marceau;Andreas S. Puschnik;Karim Majzoub;Yaw Shin Ooi

  • The Phosphoproteomes of Plasmodium falciparum and Toxoplasma gondii Reveal Unusual Adaptations Within and Beyond the Parasites' Boundaries

    Moritz Treeck;John L. Sanders;Joshua E. Elias;John C. Boothroyd

  • Quantitative Imaging of Gut Microbiota Spatial Organization

    Kristen A. Earle;Gabriel Billings;Michael Sigal;Joshua S. Lichtman

  • BRCA1-Dependent Ubiquitination of γ-Tubulin Regulates Centrosome Number

    Lea M. Starita;Yuka Machida;Satish Sankaran;Joshua E. Elias

  • Intensity-based protein identification by machine learning from a library of tandem mass spectra

    Joshua E Elias;Francis D Gibbons;Oliver D King;Frederick P Roth

  • A function for cyclin D1 in DNA repair uncovered by protein interactome analyses in human cancers

    Siwanon Jirawatnotai;Yiduo Hu;Wojciech Michowski;Joshua E. Elias;Joshua E. Elias

  • Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae

    Xue Li;Scott A Gerber;Adam D Rudner;Sean A Beausoleil

  • Optimization and Use of Peptide Mass Measurement Accuracy in Shotgun Proteomics

    Wilhelm Haas;Brendan K. Faherty;Scott A. Gerber;Joshua E. Elias

  • The Parkinson's disease-associated DJ-1 protein is a transcriptional co-activator that protects against neuronal apoptosis

    Jin Xu;Nan Zhong;Haoyong Wang;Joshua E. Elias

  • Physiological blood-brain transport is impaired with age by a shift in transcytosis.

    Andrew C. Yang;Marc Y. Stevens;Michelle B. Chen;Davis P. Lee

  • Gut Microbiota-Targeted Diets Modulate Human Immune Status

    Hannah Constance Wastyk;Gabriela K Fragiadakis;Dalia Perelman;Dylan Dahan

Frequent Co-Authors

Steven P. Gygi
Steven P. Gygi Harvard University
Mark M. Davis
Mark M. Davis Stanford University
Justin L. Sonnenburg
Justin L. Sonnenburg Stanford University
Ronald Levy
Ronald Levy Stanford University
Or Gozani
Or Gozani Stanford University
Kerwyn Casey Huang
Kerwyn Casey Huang Stanford University
Jan E. Carette
Jan E. Carette Stanford University
Wilhelm Haas
Wilhelm Haas Harvard University
Chih Long Liu
Chih Long Liu Stanford University
Judit Villén
Judit Villén University of Washington

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