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Genetics

D-Index
53
Citations
13457
World Ranking
3713
National Ranking
1604

Research.com Recognitions

  • 2014 - Fellow of John Simon Guggenheim Memorial Foundation
  • 2006 - Fellow of Alfred P. Sloan Foundation

Overview

Joseph W. Thornton is affiliated with the University of Chicago in the United States. Their research primarily focuses on the fields of Biochemistry, Genetics, and Molecular Biology, with a significant concentration on Molecular Biology, Genetics, and Cell Biology as key subfields.

The scientist's main topics of study include:

  • Evolution and Genetic Dynamics
  • RNA and protein synthesis mechanisms
  • Protein Structure and Dynamics
  • Genomics and Phylogenetic Studies
  • Bioinformatics and Genomic Networks
  • Genetic diversity and population structure
  • Hemoglobin structure and function

Joseph W. Thornton has published numerous papers in notable venues, including:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • JAMA Ophthalmology
  • JAMA Pediatrics
  • Nature
  • eLife

Notable recent publications include:

  • "Origin of complexity in haemoglobin evolution," 2020, Nature
  • "A hydrophobic ratchet entrenches molecular complexes," 2020, Nature
  • "Epistatic drift causes gradual decay of predictability in protein evolution," 2022, Science
  • "Contingency and chance erase necessity in the experimental evolution of ancestral proteins," 2021, eLife
  • "The simplicity of protein sequence-function relationships," 2024, Nature Communications

This researcher frequently collaborates with the following coauthors:

  • Annette Flanagin
  • Tracy Frey
  • Sara Billings
  • Juliet Orellana
  • Paul Ruich

Throughout their career, Joseph W. Thornton has been recognized with awards such as:

  • Fellow of John Simon Guggenheim Memorial Foundation, 2014
  • Fellow of Alfred P. Sloan Foundation, 2006

Best Publications

  • Resurrecting the Ancestral Steroid Receptor: Ancient Origin of Estrogen Signaling

    Joseph W. Thornton;Joseph W. Thornton;Eleanor Need;Eleanor Need;David P Crews;David P Crews

  • Evolution of vertebrate steroid receptors from an ancestral estrogen receptor by ligand exploitation and serial genome expansions

    Joseph W. Thornton

  • Evolution of Hormone-Receptor Complexity by Molecular Exploitation

    Jamie T. Bridgham;Sean M. Carroll;Joseph W. Thornton

  • Performance of maximum parsimony and likelihood phylogenetics when evolution is heterogeneous

    Bryan Kolaczkowski;Joseph W. Thornton

  • Identification of a third distinct estrogen receptor and reclassification of estrogen receptors in teleosts.

    Mary Beth Hawkins;Joseph W. Thornton;David P Crews;James K. Skipper

  • Epistasis in protein evolution

    Tyler N. Starr;Joseph W. Thornton

  • Crystal structure of an ancient protein: evolution by conformational epistasis.

    Eric A. Ortlund;Jamie T. Bridgham;Matthew R. Redinbo;Joseph W. Thornton

  • Structural analyses reveal phosphatidyl inositols as ligands for the NR5 orphan receptors SF-1 and LRH-1.

    Irina N. Krylova;Elena P. Sablin;Jamie Moore;Robert X. Xu

  • An epistatic ratchet constrains the direction of glucocorticoid receptor evolution

    Jamie T. Bridgham;Eric A. Ortlund;Joseph W. Thornton

  • Resurrecting ancient genes: experimental analysis of extinct molecules

    Joseph W. Thornton

  • Mechanistic approaches to the study of evolution: The functional synthesis

    Antony M. Dean;Joseph W. Thornton

  • Evolutionary biochemistry: revealing the historical and physical causes of protein properties

    Michael J. Harms;Joseph W. Thornton;Joseph W. Thornton

  • Gene Family Evolution and Homology: Genomics Meets Phylogenetics

    Joseph W. Thornton;Rob DeSalle

  • Protein evolution by molecular tinkering: diversification of the nuclear receptor superfamily from a ligand-dependent ancestor.

    Jamie T. Bridgham;Geeta N. Eick;Claire Larroux;Kirti Deshpande

  • Analyzing protein structure and function using ancestral gene reconstruction.

    Michael J Harms;Joseph W Thornton

  • The interface of protein structure, protein biophysics, and molecular evolution.

    David A Liberles;Sarah A Teichmann;Ivet Bahar;Ugo Bastolla

  • Evolution of increased complexity in a molecular machine

    Gregory C. Finnigan;Victor Hanson-Smith;Tom H. Stevens;Joseph W. Thornton;Joseph W. Thornton;Joseph W. Thornton

  • The Octopus vulgaris estrogen receptor is a constitutive transcriptional activator: evolutionary and functional implications.

    June Keay;Jamie T. Bridgham;Joseph W. Thornton

  • Alternative evolutionary histories in the sequence space of an ancient protein

    Tyler N. Starr;Lora K. Picton;Joseph W. Thornton

  • Robustness of Ancestral Sequence Reconstruction to Phylogenetic Uncertainty

    Victor Hanson-Smith;Bryan Kolaczkowski;Joseph W. Thornton;Joseph W. Thornton

Frequent Co-Authors

Rob DeSalle
Rob DeSalle American Museum of Natural History
Martha L. Bulyk
Martha L. Bulyk Harvard University
Matthew W. Hahn
Matthew W. Hahn Indiana University
Taisen Iguchi
Taisen Iguchi National Institute for Basic Biology
Nicole King
Nicole King University of California, Berkeley
David Crews
David Crews The University of Texas at Austin
Jay F. Storz
Jay F. Storz University of Nebraska–Lincoln
Brian F. Volkman
Brian F. Volkman Medical College of Wisconsin
Kai Zinn
Kai Zinn California Institute of Technology
Justin L. P. Benesch
Justin L. P. Benesch University of Oxford

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