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Jose C. Clemente

D-Index & Metrics

Biology and Biochemistry

D-Index
73
Citations
84204
World Ranking
5773
National Ranking
2728

Jose C. Clemente publication distribution in Biology and Biochemistry in 2026

The chart shows the distribution of publications by all Research.com ranked scientists in the field of Biology and Biochemistry in 2026. The highlighted bar marks where Jose C. Clemente sits on this spectrum.

47–56 publications: 8 scientists 57–66 publications: 35 scientists 67–76 publications: 106 scientists 77–86 publications: 231 scientists 87–96 publications: 414 scientists 97–106 publications: 546 scientists 107–116 publications: 704 scientists 117–126 publications: 849 scientists 127–136 publications: 980 scientists 137–146 publications: 942 scientists 147–156 publications: 969 scientists 157–166 publications: 950 scientists 167–176 publications: 951 scientists 177–186 publications: 915 scientists 187–196 publications: 787 scientists 197–206 publications: 841 scientists 207–216 publications: 735 scientists 217–226 publications: 709 scientists 227–236 publications: 651 scientists 237–246 publications: 605 scientists 247–256 publications: 510 scientists 257–266 publications: 524 scientists 267–276 publications: 434 scientists 277–286 publications: 418 scientists 287–296 publications: 350 scientists 297–306 publications: 363 scientists 307–316 publications: 315 scientists 317–326 publications: 296 scientists 327–336 publications: 261 scientists 337–346 publications: 240 scientists 347–356 publications: 219 scientists 357–366 publications: 197 scientists 367–376 publications: 154 scientists 377–386 publications: 161 scientists 387–396 publications: 155 scientists 397–406 publications: 145 scientists 407–416 publications: 124 scientists 417–426 publications: 112 scientists 427–436 publications: 132 scientists 437–446 publications: 116 scientists 447–456 publications: 99 scientists 457–466 publications: 81 scientists 467–476 publications: 91 scientists 477–486 publications: 80 scientists 487–496 publications: 80 scientists 497–506 publications: 60 scientists 507–516 publications: 36 scientists 517–526 publications: 46 scientists 527–536 publications: 54 scientists 537–546 publications: 44 scientists 547–556 publications: 43 scientists 557–566 publications: 43 scientists 567–576 publications: 42 scientists 577–586 publications: 25 scientists 587–596 publications: 34 scientists 597–606 publications: 23 scientists 607–616 publications: 33 scientists 617–626 publications: 31 scientists 627–636 publications: 27 scientists 637–646 publications: 25 scientists 647–656 publications: 28 scientists 657–666 publications: 34 scientists 667–676 publications: 18 scientists 677–686 publications: 16 scientists 687–696 publications: 10 scientists 697–706 publications: 12 scientists 707–716 publications: 21 scientists 717–726 publications: 12 scientists 727–736 publications: 12 scientists 737–746 publications: 10 scientists 747–756 publications: 7 scientists 757–766 publications: 13 scientists 767–776 publications: 15 scientists 777–786 publications: 13 scientists 787–796 publications: 9 scientists 797–806 publications: 9 scientists 807–816 publications: 7 scientists 817–826 publications: 4 scientists 827–836 publications: 9 scientists 837–846 publications: 7 scientists 847–856 publications: 3 scientists 857–866 publications: 5 scientists 867–876 publications: 5 scientists 877–886 publications: 11 scientists 887–896 publications: 3 scientists 897–906 publications: 4 scientists 907–916 publications: 7 scientists 917–926 publications: 5 scientists 927–936 publications: 6 scientists 937–946 publications: 6 scientists 947–956 publications: 3 scientists 957–966 publications: 7 scientists 967–976 publications: 2 scientists 977–986 publications: 2 scientists 987–996 publications: 1 scientists 997–1,006 publications: 5 scientists 1,007–1,016 publications: 2 scientists 1,017–1,026 publications: 2 scientists 1,027 publications: 1 scientists 1,028+ publications: 100 scientists
47 publications 1,028+

This scientist: 169 publications — 36th percentile

36% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 1,028 publications or more.

Jose C. Clemente D-index placement in Biology and Biochemistry in 2026

The chart shows the D-index (discipline H-index) distribution of Biology and Biochemistry scientists ranked by Research.com in 2026. The highlighted bar marks where Jose C. Clemente sits on this spectrum.

40–41 D-Index: 80 scientists 42–43 D-Index: 183 scientists 44–45 D-Index: 317 scientists 46–47 D-Index: 504 scientists 48–49 D-Index: 718 scientists 50–51 D-Index: 900 scientists 52–53 D-Index: 1,026 scientists 54–55 D-Index: 1,150 scientists 56–57 D-Index: 1,236 scientists 58–59 D-Index: 1,253 scientists 60–61 D-Index: 1,163 scientists 62–63 D-Index: 1,131 scientists 64–65 D-Index: 1,032 scientists 66–67 D-Index: 897 scientists 68–69 D-Index: 814 scientists 70–71 D-Index: 715 scientists 72–73 D-Index: 709 scientists 74–75 D-Index: 596 scientists 76–77 D-Index: 512 scientists 78–79 D-Index: 473 scientists 80–81 D-Index: 412 scientists 82–83 D-Index: 373 scientists 84–85 D-Index: 358 scientists 86–87 D-Index: 285 scientists 88–89 D-Index: 273 scientists 90–91 D-Index: 227 scientists 92–93 D-Index: 208 scientists 94–95 D-Index: 193 scientists 96–97 D-Index: 153 scientists 98–99 D-Index: 157 scientists 100–101 D-Index: 148 scientists 102–103 D-Index: 120 scientists 104–105 D-Index: 113 scientists 106–107 D-Index: 100 scientists 108–109 D-Index: 86 scientists 110–111 D-Index: 67 scientists 112–113 D-Index: 72 scientists 114–115 D-Index: 73 scientists 116–117 D-Index: 64 scientists 118–119 D-Index: 53 scientists 120–121 D-Index: 60 scientists 122–123 D-Index: 54 scientists 124–125 D-Index: 43 scientists 126–127 D-Index: 38 scientists 128–129 D-Index: 49 scientists 130–131 D-Index: 26 scientists 132–133 D-Index: 18 scientists 134–135 D-Index: 23 scientists 136–137 D-Index: 32 scientists 138–139 D-Index: 32 scientists 140–141 D-Index: 27 scientists 142–143 D-Index: 19 scientists 144–145 D-Index: 22 scientists 146–147 D-Index: 12 scientists 148–149 D-Index: 16 scientists 150–151 D-Index: 14 scientists 152–153 D-Index: 10 scientists 154–155 D-Index: 13 scientists 156–157 D-Index: 10 scientists 158–159 D-Index: 7 scientists 160–161 D-Index: 9 scientists 162–163 D-Index: 13 scientists 164–165 D-Index: 4 scientists 166 D-Index: 4 scientists 167+ D-Index: 98 scientists
40 D-Index 167+

This scientist: 73 D-Index — 71st percentile

71% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 167 D-Index or more.

Overview

Jose C. Clemente is affiliated with the Icahn School of Medicine at Mount Sinai in the United States. Their research spans a range of topics primarily within the fields of Medicine and Biochemistry, Genetics and Molecular Biology, with significant contributions to Molecular Biology and Infectious Diseases.

Their scientific output focuses on several interrelated areas, such as gut microbiota and health, Clostridium difficile and Clostridium perfringens research, and Mycobacterium research and diagnosis. Additional themes include Helicobacter pylori-related gastroenterology studies, pediatric health and respiratory diseases, respiratory viral infections research, and gastrointestinal motility and disorders.

Frequent publication venues for their work include bioRxiv (Cold Spring Harbor Laboratory), Cell Host & Microbe, RICEd Revista de Investigación en Ciencias de la Educación, Nature Microbiology, and the American Journal of Respiratory and Critical Care Medicine.

Jose C. Clemente has collaborated repeatedly with several co-authors, including Leopoldo N. Segal, Benjamin G. Wu, Yonghua Li, Imran Sulaiman, and Kevin Bu. These collaborations reflect a sustained involvement in interdisciplinary research initiatives.

Recently published papers encompass the following:

  • Microbial signatures in the lower airways of mechanically ventilated COVID-19 patients associated with poor clinical outcome, 2021, Nature Microbiology
  • Fungal Trans-kingdom Dynamics Linked to Responsiveness to Fecal Microbiota Transplantation (FMT) Therapy in Ulcerative Colitis, 2020, Cell Host & Microbe
  • Precise quantification of bacterial strains after fecal microbiota transplantation delineates long-term engraftment and explains outcomes, 2021, Nature Microbiology
  • Episodic Aspiration with Oral Commensals Induces a MyD88-dependent, Pulmonary T-Helper Cell Type 17 Response that Mitigates Susceptibility to Streptococcus pneumoniae, 2020, American Journal of Respiratory and Critical Care Medicine
  • Defined microbiota transplant restores Th17/RORγt + regulatory T cell balance in mice colonized with inflammatory bowel disease microbiotas, 2020, Proceedings of the National Academy of Sciences

Best Publications

  • UCHIME improves sensitivity and speed of chimera detection

    Robert C. Edgar;Brian J. Haas;Jose C. Clemente;Christopher Quince

  • Structure, function and diversity of the healthy human microbiome

    Curtis Huttenhower;Curtis Huttenhower;Dirk Gevers;Rob Knight;Rob Knight;Sahar Abubucker

  • Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

    Morgan G I Langille;Jesse Zaneveld;J Gregory Caporaso;J Gregory Caporaso;Daniel McDonald

  • Human gut microbiome viewed across age and geography

    Tanya Yatsunenko;Federico E Rey;Mark J Manary;Mark J Manary;Indi Trehan;Indi Trehan

  • Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice

    Vanessa K. Ridaura;Jeremiah J. Faith;Federico E. Rey;Jiye Cheng

  • The impact of the gut microbiota on human health: an integrative view.

    Jose C. Clemente;Luke K. Ursell;Laura Wegener Parfrey;Rob Knight;Rob Knight

  • A framework for human microbiome research

    Barbara A. Methé;Karen E. Nelson;Mihai Pop;Heather H. Creasy

  • The Long-Term Stability of the Human Gut Microbiota

    Jeremiah J. Faith;Janaki L. Guruge;Mark Charbonneau;Sathish Subramanian

  • Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans

    Brian D. Muegge;Justin Kuczynski;Dan Knights;Jose C. Clemente

  • Cohabiting family members share microbiota with one another and with their dogs

    Se Jin Song;Christian Lauber;Elizabeth K Costello;Catherine A Lozupone

  • The microbiome in early life: implications for health outcomes

    Sabrina Tamburini;Nan Shen;Han Chih Wu;Jose C Clemente

  • Partial restoration of the microbiota of cesarean-born infants via vaginal microbial transfer

    Maria G Dominguez-Bello;Maria G Dominguez-Bello;Kassandra M De Jesus-Laboy;Nan Shen;Laura M Cox

  • The microbiome of uncontacted Amerindians

    Jose C. Clemente;Erica C. Pehrsson;Martin J. Blaser;Martin J. Blaser;Kuldip Sandhu

  • Experimental and analytical tools for studying the human microbiome

    Justin Kuczynski;Christian L. Lauber;William A. Walters;Laura Wegener Parfrey

  • The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome

    Daniel McDonald;Jose C Clemente;Justin Kuczynski;Jai Ram Rideout

  • Intestinal Microbiota Is Influenced by Gender and Body Mass Index.

    Carmen Haro;Carmen Haro;Oriol A. Rangel-Zúñiga;Oriol A. Rangel-Zúñiga;Juan F. Alcalá-Díaz;Juan F. Alcalá-Díaz;Francisco Gómez-Delgado;Francisco Gómez-Delgado

  • Enrichment of the lung microbiome with oral taxa is associated with lung inflammation of a Th17 phenotype.

    Leopoldo N. Segal;Jose C. Clemente;Jun Chieh J. Tsay;Sergei B. Koralov

  • Reconstructing the microbial diversity and function of pre-agricultural tallgrass prairie soils in the United States.

    Noah Fierer;Noah Fierer;Joshua Ladau;Jose C. Clemente;Jonathan W. Leff;Jonathan W. Leff

  • Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences.

    Jai Ram Rideout;Jai Ram Rideout;Yan He;Jose A. Navas-Molina;William A. Walters

  • Subsistence strategies in traditional societies distinguish gut microbiomes

    Alexandra J. Obregon-Tito;Raul Y. Tito;Jessica Metcalf;Krithivasan Sankaranarayanan

Frequent Co-Authors

Rob Knight
Rob Knight University of California, San Diego
Jean-Frederic Colombel
Jean-Frederic Colombel Icahn School of Medicine at Mount Sinai
Martin J. Blaser
Martin J. Blaser Rutgers, The State University of New Jersey
J. Gregory Caporaso
J. Gregory Caporaso Northern Arizona University
Dan Knights
Dan Knights University of Minnesota
Marla Dubinsky
Marla Dubinsky Icahn School of Medicine at Mount Sinai
Jack A. Gilbert
Jack A. Gilbert University of California, San Diego
Curtis Huttenhower
Curtis Huttenhower Harvard University
Catherine A. Lozupone
Catherine A. Lozupone University of Colorado Anschutz Medical Campus
Noah Fierer
Noah Fierer University of Colorado Boulder

External Links

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Related Online Degrees & Career Pathways

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Best Scientists Citing Jose C. Clemente

Rob Knight

Rob Knight

University of California, San Diego

Publications: 329

Curtis Huttenhower

Curtis Huttenhower

Harvard University

Publications: 205

Jizhong Zhou

Jizhong Zhou

University of Oklahoma

Publications: 187

Jack A. Gilbert

Jack A. Gilbert

University of California, San Diego

Publications: 165

Willem M. de Vos

Willem M. de Vos

Wageningen University & Research

Publications: 157

Catherine Stanton

Catherine Stanton

Teagasc - The Irish Agriculture and Food Development Authority

Publications: 104

Martin J. Blaser

Martin J. Blaser

Rutgers, The State University of New Jersey

Publications: 103

Ramnik J. Xavier

Ramnik J. Xavier

Broad Institute

Publications: 91

Jeroen Raes

Jeroen Raes

KU Leuven

Publications: 89

Joseph F. Petrosino

Joseph F. Petrosino

Baylor College of Medicine

Publications: 84

Pieter C. Dorrestein

Pieter C. Dorrestein

University of California, San Diego

Publications: 81

Fredrik Bäckhed

Fredrik Bäckhed

University of Gothenburg

Publications: 80

Michael J. Sadowsky

Michael J. Sadowsky

University of Minnesota

Publications: 76

John F. Cryan

John F. Cryan

University College Cork

Publications: 73

Eric J. Alm

Eric J. Alm

MIT

Publications: 69

Nicola Segata

Nicola Segata

University of Trento

Publications: 68

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