Dan Knights spends much of his time researching Metagenomics, Microbiome, Human microbiome, Genetics and Computational biology. His biological study spans a wide range of topics, including Zoology, Ecology, Disease, Inflammatory bowel disease and Culture independent. The Microbiome study combines topics in areas such as Shotgun sequencing, Feces, Microbiology and Immunology.
When carried out as part of a general Genetics research project, his work on Marker gene, RNA RIBOSOMAL 16S, Sequencing data and Pyrosequencing is frequently linked to work in Rare biosphere, therefore connecting diverse disciplines of study. His work deals with themes such as mothur, Sequence analysis and Genetic Databases, which intersect with Computational biology. As part of one scientific family, Dan Knights deals mainly with the area of Human Microbiome Project, narrowing it down to issues related to the Earth Microbiome Project, and often Genome.
His main research concerns Microbiome, Metagenomics, Gut flora, Immunology and Genetics. His study in Microbiome is interdisciplinary in nature, drawing from both Zoology, Obesity and Microbiology. His studies deal with areas such as Ecology, Genome, Computational biology and DNA sequencing as well as Metagenomics.
In his work, Endocrinology is strongly intertwined with Internal medicine, which is a subfield of Gut flora. His Immunology research incorporates elements of Cancer, Hematopoietic stem cell transplantation, Antibiotics and Gene expression. His studies in Human microbiome integrate themes in fields like Evolutionary biology, Shotgun sequencing and Earth Microbiome Project.
Dan Knights mainly investigates Microbiome, Gut flora, Internal medicine, Gastroenterology and Obesity. His Microbiome study integrates concerns from other disciplines, such as Zoology, Immunology and Metagenomics. Dan Knights has researched Metagenomics in several fields, including DNA, Data mining, Shotgun and Deep sequencing.
His Gut flora study combines topics from a wide range of disciplines, such as Lactobacillus, Microbiology and Environmental health. His work in the fields of Internal medicine, such as Transplantation, Acute leukemia and Healthy individuals, intersects with other areas such as Cefepime. His study in the fields of Irritable bowel syndrome under the domain of Gastroenterology overlaps with other disciplines such as In patient.
His scientific interests lie mostly in Microbiome, Gut flora, Gastroenterology, Internal medicine and Irritable bowel syndrome. Dan Knights is studying Human microbiome, which is a component of Microbiome. His Gut flora study combines topics in areas such as Intestinal absorption, Flora, Inflammatory bowel disease and Lactobacillus.
His Gastroenterology research is multidisciplinary, relying on both Akkermansia, Bacteroides, Aspirin, Prevotella and Colorectal cancer. His Irritable bowel syndrome research includes themes of Metabolome, Computational biology, Multi omics and Disease. His research in Dietary history intersects with topics in Human gut, Environmental health and Metagenomics.
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QIIME allows analysis of high-throughput community sequencing data.
J Gregory Caporaso;Justin Kuczynski;Jesse Stombaugh;Kyle Bittinger.
Nature Methods (2010)
Structure, function and diversity of the healthy human microbiome
Curtis Huttenhower;Curtis Huttenhower;Dirk Gevers;Rob Knight;Rob Knight;Sahar Abubucker.
Nature (2012)
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
Morgan G I Langille;Jesse Zaneveld;J Gregory Caporaso;J Gregory Caporaso;Daniel McDonald.
Nature Biotechnology (2013)
Human gut microbiome viewed across age and geography
Tanya Yatsunenko;Federico E Rey;Mark J Manary;Mark J Manary;Indi Trehan;Indi Trehan.
Nature (2012)
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Evan Bolyen;Jai Ram Rideout;Matthew R. Dillon;Nicholas A. Bokulich.
Nature Biotechnology (2019)
Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes
Gary D. Wu;Jun Chen;Christian Hoffmann;Christian Hoffmann;Kyle Bittinger.
Science (2011)
Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.
Evan Bolyen;Jai Ram Rideout;Matthew R. Dillon;Nicholas A. Bokulich.
Nature Biotechnology (2019)
The Treatment-Naive Microbiome in New-Onset Crohn’s Disease
Dirk Gevers;Subra Kugathasan;Lee A. Denson;Yoshiki Vázquez-Baeza.
Cell Host & Microbe (2014)
A framework for human microbiome research
Barbara A. Methé;Karen E. Nelson;Mihai Pop;Heather H. Creasy.
Nature (2012)
Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans
Brian D. Muegge;Justin Kuczynski;Dan Knights;Jose C. Clemente.
Science (2011)
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