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D-Index & Metrics

Biology and Biochemistry

D-Index
57
Citations
16303
World Ranking
13603
National Ranking
5771

Overview

Emmanuel F. Mongodin is affiliated with the University of Maryland, Baltimore, in the United States. Their research spans multiple topics within the fields of medicine and biochemistry, genetics, and molecular biology. Mongodin has contributed extensively to subfields including molecular biology, infectious diseases, periodontics, dermatology, and ecology.

Their work encompasses a variety of main topics, predominantly focused on gut microbiota and health. Additional key areas of study include Clostridium difficile and Clostridium perfringens research, oral microbiology and periodontitis research, probiotics and fermented foods, acne and rosacea treatments and effects, microbial community ecology and physiology, and vector-borne infectious diseases.

Frequent co-authors collaborating with Mongodin consist of Amy R. Sapkota, Suhana Chattopadhyay, Jonathan S. Bromberg, Leena Malayil, and Lauren Hittle. These collaborations reflect ongoing partnerships in research projects across their diverse fields of study.

Their research has been published in various scientific journals, with multiple publications appearing in venues such as Scientific Reports, Journal of Prosthodontics, Applied Microbiology and Biotechnology, Environmental Research, and Research Square.

Notable recent papers by Mongodin include:

  • A global metagenomic map of urban microbiomes and antimicrobial resistance (2021) in Cell
  • Perfect timing: circadian rhythms, sleep, and immunity - an NIH workshop summary (2020) in JCI Insight
  • Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment (2020) in Nature Medicine
  • Bifidobacterium mechanisms of immune modulation and tolerance (2023) in Gut Microbes
  • Minocycline and Its Impact on Microbial Dysbiosis in the Skin and Gastrointestinal Tract of Acne Patients (2020) in Annals of Dermatology

Best Publications

  • Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus

    Binh An Diep;Binh An Diep;Steven R Gill;Richard F Chang;Richard F Chang;Tiffany HaiVan Phan

  • A Guild of 45 CRISPR-Associated (Cas) Protein Families and Multiple CRISPR/Cas Subtypes Exist in Prokaryotic Genomes

    Daniel Henry Haft;Jeremy Selengut;Emmanuel F. Mongodin;Karen E. Nelson

  • Insights on Evolution of Virulence and Resistance from the Complete Genome Analysis of an Early Methicillin-Resistant Staphylococcus aureus Strain and a Biofilm-Producing Methicillin-Resistant Staphylococcus epidermidis Strain

    Steven R. Gill;Derrick E. Fouts;Gordon L. Archer;Emmanuel F. Mongodin

  • The Pangenome Structure of Escherichia coli: Comparative Genomic Analysis of E. coli Commensal and Pathogenic Isolates

    David A. Rasko;M. J. Rosovitz;Garry S. A. Myers;Emmanuel F. Mongodin

  • Bacterial diversity in the oral cavity of 10 healthy individuals

    Elisabeth M Bik;Clara Davis Long;Gary C Armitage;Peter Loomer

  • Major Structural Differences and Novel Potential Virulence Mechanisms from the Genomes of Multiple Campylobacter Species

    Derrick E Fouts;Emmanuel F Mongodin;Robert E Mandrell;William G Miller

  • Whole genome comparisons of serotype 4b and 1/2a strains of the food‐borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species

    Karen E. Nelson;Derrick E. Fouts;Emmanuel F. Mongodin;Jacques Ravel

  • Integrated Metagenomics/Metaproteomics Reveals Human Host-Microbiota Signatures of Crohn's Disease

    Alison R. Erickson;Brandi L. Cantarel;Regina Lamendella;Youssef El Darzi

  • The genome of Salinibacter ruber: Convergence and gene exchange among hyperhalophilic bacteria and archaea

    E. F. Mongodin;K. E. Nelson;S. Daugherty;R. T. DeBoy

  • A global metagenomic map of urban microbiomes and antimicrobial resistance

    David Danko;Daniela Bezdan;Evan E. Afshin;Sofia Ahsanuddin

  • High-resolution bacterial 16S rRNA gene profile meta-analysis and biofilm status reveal common colorectal cancer consortia.

    Julia L. Drewes;James R. White;Christine M. Dejea;Payam Fathi

  • Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1.

    Emmanuel F Mongodin;Nir Shapir;Sean C Daugherty;Robert T DeBoy

  • Analysis of the gut microbiota in the old order Amish and its relation to the metabolic syndrome.

    Margaret L. Zupancic;Brandi L. Cantarel;Zhenqiu Liu;Elliott F. Drabek

  • Perfect timing: circadian rhythms, sleep, and immunity - an NIH workshop summary.

    Jeffrey A. Haspel;Ron Anafi;Marishka K. Brown;Nicolas Cermakian

  • Genome Stability of Lyme Disease Spirochetes: Comparative Genomics of Borrelia burgdorferi Plasmids

    Sherwood R. Casjens;Emmanuel F. Mongodin;Wei Gang Qiu;Benjamin J. Luft

  • Insights into Plant Cell Wall Degradation from the Genome Sequence of the Soil Bacterium Cellvibrio japonicus

    Robert T. DeBoy;Emmanuel F. Mongodin;Derrick E. Fouts;Louise E. Tailford

  • The importance of a multifaceted approach to characterizing the microbial flora of chronic wounds.

    Anne Han;Jonathan M. Zenilman;Johan H. Melendez;Mark E. Shirtliff

  • Hydrogenomics of the Extremely Thermophilic Bacterium Caldicellulosiruptor saccharolyticus

    Harmen J. G. van de Werken;Marcel R. A. Verhaart;Amy L. VanFossen;Karin Willquist

  • The potential role of lung microbiota in lung cancer attributed to household coal burning exposures.

    H. Dean Hosgood;Amy R. Sapkota;Nathaniel Rothman;Thomas Rohan

  • Microarray transcription analysis of clinical Staphylococcus aureus isolates resistant to vancomycin.

    Emmanuel Mongodin;Jon Finan;Michael W. Climo;Adriana E. Rosato

Frequent Co-Authors

Claire M. Fraser
Claire M. Fraser University of Maryland, Baltimore
Karen E. Nelson
Karen E. Nelson J. Craig Venter Institute
Sherwood R. Casjens
Sherwood R. Casjens University of Utah
Steven R. Gill
Steven R. Gill University of Rochester Medical Center
Benjamin J. Luft
Benjamin J. Luft Stony Brook University
Jonathan S. Bromberg
Jonathan S. Bromberg University of Maryland, Baltimore
Mihai Pop
Mihai Pop University of Maryland, College Park
Robert T. DeBoy
Robert T. DeBoy J. Craig Venter Institute
Jacques Ravel
Jacques Ravel University of Maryland, Baltimore
James R. White
James R. White Johns Hopkins University School of Medicine

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