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Biology and Biochemistry
Russia
2023

D-Index & Metrics

Biology and Biochemistry

D-Index
73
Citations
25605
World Ranking
5830
National Ranking
6

Research.com Recognitions

  • 2023 - Research.com Biology and Biochemistry in Russia Leader Award
  • 2022 - Research.com Biology and Biochemistry in Russia Leader Award

Overview

Dmitriy M. Chudakov is affiliated with the Pirogov Russian National Research Medical University in the Russian Federation. Their research is primarily situated within the fields of Immunology and Microbiology as well as Medicine, with a significant focus on immunological studies.

The scientist's work spans several subfields, including Immunology, Oncology, Molecular Biology, Infectious Diseases, and Radiology, Nuclear Medicine, and Imaging. This multidisciplinary approach reflects a broad engagement with both fundamental and applied biomedical sciences.

The main topics covered by Dmitriy M. Chudakov's research include:

  • T-cell and B-cell Immunology
  • Immune Cell Function and Interaction
  • Immunotherapy and Immune Responses
  • Cancer Immunotherapy and Biomarkers
  • CAR-T cell therapy research
  • COVID-19 Clinical Research Studies
  • Monoclonal and Polyclonal Antibodies Research

Notable recent papers authored or coauthored by Dmitriy M. Chudakov include:

  • B cells, plasma cells and antibody repertoires in the tumour microenvironment, 2020, Nature Reviews. Immunology
  • Two subsets of stem-like CD8+ memory T cell progenitors with distinct fate commitments in humans, 2020, Nature Immunology
  • VDJdb in the pandemic era: a compendium of T cell receptors specific for SARS-CoV-2, 2022, Nature Methods
  • Longitudinal high-throughput TCR repertoire profiling reveals the dynamics of T-cell memory formation after mild COVID-19 infection, 2021, eLife
  • Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides, 2022, Nature

Frequent co-authors in their publications include:

  • Mikhail Shugay
  • Olga V. Britanova
  • Ivan V. Zvyagin
  • Ilgar Z. Mamedov
  • Irina A. Shagina

Thevenues where Dmitriy M. Chudakov most frequently publishes are:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • eLife
  • Frontiers in Immunology
  • Cell Reports
  • Zenodo (CERN European Organization for Nuclear Research)

This research profile outlines a comprehensive engagement with immune system function across both health and disease, including areas related to cancer immunotherapy and infectious disease response. The variety of publication venues and co-authorship collaborations indicate active participation in international scientific communities focused on immunology and related biomedical fields.

Best Publications

  • Fluorescent Proteins and Their Applications in Imaging Living Cells and Tissues

    Dmitriy M. Chudakov;Mikhail V. Matz;Sergey Lukyanov;Konstantin A. Lukyanov

  • MiXCR: software for comprehensive adaptive immunity profiling.

    Dmitriy A Bolotin;Stanislav Poslavsky;Igor Mitrophanov;Mikhail Shugay

  • Bright far-red fluorescent protein for whole-body imaging.

    Dmitry Shcherbo;Ekaterina M Merzlyak;Tatiana V Chepurnykh;Arkady F Fradkov

  • Bright monomeric red fluorescent protein with an extended fluorescence lifetime

    Ekaterina M Merzlyak;Joachim Goedhart;Dmitry Shcherbo;Mariya E Bulina

  • Fluorescent proteins as a toolkit for in vivo imaging

    Dmitriy M. Chudakov;Sergey Lukyanov;Konstantin A. Lukyanov

  • A genetically encoded photosensitizer.

    Maria E Bulina;Dmitriy M Chudakov;Olga V Britanova;Yurii G Yanushevich

  • Far-red fluorescent tags for protein imaging in living tissues.

    Dmitry Shcherbo;Christopher S. Murphy;Galina V. Ermakova;Elena A. Solovieva

  • VDJdb: a curated database of T-cell receptor sequences with known antigen specificity

    Mikhail Shugay;Dmitriy V Bagaev;Ivan V Zvyagin;Renske M Vroomans

  • Regulatory T Cells Exhibit Distinct Features in Human Breast Cancer.

    George Plitas;Catherine Konopacki;Kenmin Wu;Paula D. Bos

  • Photoactivatable fluorescent proteins

    Konstantin A. Lukyanov;Dmitry M. Chudakov;Sergey Lukyanov;Vladislav V. Verkhusha

  • Local fitness landscape of the green fluorescent protein.

    Karen S. Sarkisyan;Dmitry A. Bolotin;Margarita V. Meer;Dinara R. Usmanova;Dinara R. Usmanova

  • VDJtools: Unifying post-analysis of T cell receptor repertoires

    Mikhail Shugay;Dmitriy V. Bagaev;Maria A. Turchaninova;Dmitriy A. Bolotin

  • B cells, plasma cells and antibody repertoires in the tumour microenvironment

    George V. Sharonov;Ekaterina O. Serebrovskaya;Diana V. Yuzhakova;Olga V. Britanova

  • Photoswitchable cyan fluorescent protein for protein tracking

    Dmitriy M Chudakov;Vladislav V Verkhusha;Dmitry B Staroverov;Ekaterina A Souslova

  • Age-Related Decrease in TCR Repertoire Diversity Measured with Deep and Normalized Sequence Profiling

    Olga V. Britanova;Ekaterina V. Putintseva;Mikhail Shugay;Mikhail Shugay;Ekaterina M. Merzlyak

  • Towards error-free profiling of immune repertoires

    Mikhail Shugay;Olga V Britanova;Ekaterina M Merzlyak;Maria A Turchaninova

  • Kindling fluorescent proteins for precise in vivo photolabeling

    Dmitriy M. Chudakov;Vsevolod V. Belousov;Andrey G. Zaraisky;Vladimir V. Novoselov

  • VDJdb in 2019: database extension, new analysis infrastructure and a T-cell receptor motif compendium

    Dmitry V Bagaev;Renske M A Vroomans;Jerome Samir;Jerome Samir;Ulrik Stervbo;Ulrik Stervbo

  • Stability and function of regulatory T cells expressing the transcription factor T-bet

    Andrew G. Levine;Alejandra Medoza;Saskia Hemmers;Bruno Moltedo

  • Conversion of red fluorescent protein into a bright blue probe.

    Oksana M. Subach;Illia S. Gundorov;Masami Yoshimura;Fedor V. Subach

Frequent Co-Authors

Sergey Lukyanov
Sergey Lukyanov Pirogov Russian National Research Medical University
Konstantin A. Lukyanov
Konstantin A. Lukyanov Skolkovo Institute of Science and Technology
David Price
David Price University of Aberdeen
Kristin Ladell
Kristin Ladell Cardiff University
Andre Franke
Andre Franke Kiel University
Alexander Y. Rudensky
Alexander Y. Rudensky Memorial Sloan Kettering Cancer Center
Šárka Pospíšilová
Šárka Pospíšilová Masaryk University
Vladislav V. Verkhusha
Vladislav V. Verkhusha Albert Einstein College of Medicine
Ton N. M. Schumacher
Ton N. M. Schumacher Antoni van Leeuwenhoek Hospital
Piper M. Treuting
Piper M. Treuting University of Washington

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