D-Index & Metrics Best Publications

D-Index & Metrics D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines.

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Computer Science D-index 32 Citations 10,845 98 World Ranking 8866 National Ranking 141

Overview

What is he best known for?

The fields of study Yoshihiro Yamanishi is best known for:

  • Gene
  • Bioinformatics
  • Genome

Yoshihiro Yamanishi is researching Drug as part of the investigation of DrugBank, Drug development and Drug repositioning. He undertakes multidisciplinary investigations into Drug development and Drug in his work. Computational biology is closely attributed to Biological network in his study. His Biological network study frequently draws connections between adjacent fields such as Computational biology. He connects Gene with In silico in his research. Yoshihiro Yamanishi connects In silico with Drug discovery in his research. He merges Drug discovery with Chemical space in his study. In his works, Yoshihiro Yamanishi undertakes multidisciplinary study on Chemical space and Cheminformatics. Yoshihiro Yamanishi incorporates Cheminformatics and DrugBank in his studies.

His most cited work include:

  • KEGG for linking genomes to life and the environment (4600 citations)
  • Prediction of drug-target interaction networks from the integration of chemical and genomic spaces (825 citations)
  • Supervised prediction of drug–target interactions using bipartite local models (495 citations)

What are the main themes of his work throughout his whole career to date

In his works, Yoshihiro Yamanishi conducts interdisciplinary research on Computational biology and Biochemistry. Yoshihiro Yamanishi performs multidisciplinary studies into Biochemistry and Computational biology in his work. His study connects Interaction network and Gene. Yoshihiro Yamanishi conducts interdisciplinary study in the fields of Bioinformatics and Cheminformatics through his research. Yoshihiro Yamanishi brings together Cheminformatics and Bioinformatics to produce work in his papers. His study deals with a combination of Artificial intelligence and Inference. He brings together Inference and Artificial intelligence to produce work in his papers. He regularly links together related areas like Protein–protein interaction in his Genetics studies. His research combines Genetics and Protein–protein interaction.

Yoshihiro Yamanishi most often published in these fields:

  • Computational biology (75.00%)
  • Gene (62.50%)
  • Bioinformatics (50.00%)

What were the highlights of his more recent work (between 2019-2022)?

  • Gene (57.14%)
  • Biochemistry (57.14%)
  • Computational biology (42.86%)

In recent works Yoshihiro Yamanishi was focusing on the following fields of study:

In his papers, Yoshihiro Yamanishi integrates diverse fields, such as Gene and KRAS. He performs integrative Biochemistry and Computational biology research in his work. In his works, Yoshihiro Yamanishi undertakes multidisciplinary study on Computational biology and Genetics. Genetics and KRAS are frequently intertwined in his study. In his papers, he integrates diverse fields, such as Bioinformatics and Cheminformatics. His Graph study frequently intersects with other fields, such as Theoretical computer science. His study in Power graph analysis extends to Theoretical computer science with its themes. His Power graph analysis study often links to related topics such as Graph. In his research, Yoshihiro Yamanishi performs multidisciplinary study on Artificial intelligence and Convolutional neural network.

Between 2019 and 2022, his most popular works were:

  • Dual graph convolutional neural network for predicting chemical networks (22 citations)
  • Lean-Docking: Exploiting Ligands’ Predicted Docking Scores to Accelerate Molecular Docking (18 citations)
  • The novel driver gene ASAP2 is a potential druggable target in pancreatic cancer (12 citations)

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

KEGG for linking genomes to life and the environment

Minoru Kanehisa;Michihiro Araki;Susumu Goto;Masahiro Hattori.
Nucleic Acids Research (2007)

5488 Citations

Prediction of drug–target interaction networks from the integration of chemical and genomic spaces

Yoshihiro Yamanishi;Michihiro Araki;Alex Gutteridge;Wataru Honda.
intelligent systems in molecular biology (2008)

946 Citations

Supervised prediction of drug–target interactions using bipartite local models

Kevin Bleakley;Yoshihiro Yamanishi.
Bioinformatics (2009)

564 Citations

Drug-target interaction prediction from chemical, genomic and pharmacological data in an integrated framework

Yoshihiro Yamanishi;Masaaki Kotera;Minoru Kanehisa;Susumu Goto.
Bioinformatics (2010)

457 Citations

Protein network inference from multiple genomic data: a supervised approach

Y. Yamanishi;J.-P. Vert;M. Kanehisa.
intelligent systems in molecular biology (2004)

314 Citations

Predicting drug side-effect profiles: a chemical fragment-based approach

Edouard Pauwels;Edouard Pauwels;Edouard Pauwels;Véronique Stoven;Véronique Stoven;Véronique Stoven;Yoshihiro Yamanishi;Yoshihiro Yamanishi;Yoshihiro Yamanishi.
BMC Bioinformatics (2011)

219 Citations

Relating drug–protein interaction network with drug side effects

Sayaka Mizutani;Edouard Pauwels;Véronique Stoven;Susumu Goto.
Bioinformatics (2012)

186 Citations

Link Propagation: A Fast Semi-supervised Learning Algorithm for Link Prediction

Hisashi Kashima;Tsuyoshi Kato;Yoshihiro Yamanishi;Masashi Sugiyama.
siam international conference on data mining (2009)

181 Citations

The inference of protein–protein interactions by co-evolutionary analysis is improved by excluding the information about the phylogenetic relationships

Tetsuya Sato;Yoshihiro Yamanishi;Minoru Kanehisa;Hiroyuki Toh.
Bioinformatics (2005)

166 Citations

Extraction of correlated gene clusters from multiple genomic data by generalized kernel canonical correlation analysis

Yoshihiro Yamanishi;Jean-Philippe Vert;Akihiro Nakaya;Minoru Kanehisa.
Bioinformatics (2003)

159 Citations

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Best Scientists Citing Yoshihiro Yamanishi

Minoru Kanehisa

Minoru Kanehisa

Kyoto University

Publications: 38

Peer Bork

Peer Bork

European Molecular Biology Laboratory

Publications: 32

Susumu Goto

Susumu Goto

Osaka University

Publications: 28

Hisashi Kashima

Hisashi Kashima

Kyoto University

Publications: 25

Tatsuya Akutsu

Tatsuya Akutsu

Kyoto University

Publications: 22

Zhu-Hong You

Zhu-Hong You

Chinese Academy of Sciences

Publications: 21

Kiyoko F. Aoki-Kinoshita

Kiyoko F. Aoki-Kinoshita

Soka University of America

Publications: 21

Lei Chen

Lei Chen

Shanghai Maritime University

Publications: 21

Hiroshi Mamitsuka

Hiroshi Mamitsuka

Kyoto University

Publications: 20

Andreas Bender

Andreas Bender

University of Cambridge

Publications: 20

Jijun Tang

Jijun Tang

University of South Carolina

Publications: 20

Feixiong Cheng

Feixiong Cheng

Case Western Reserve University

Publications: 19

Jean-Philippe Vert

Jean-Philippe Vert

Google (United States)

Publications: 19

Min Zhao

Min Zhao

University of the Sunshine Coast

Publications: 17

Igor V. Grigoriev

Igor V. Grigoriev

Lawrence Berkeley National Laboratory

Publications: 17

Samuel Kaski

Samuel Kaski

Aalto University

Publications: 17

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