World's Best Scientists 2026 revealed!

D-Index & Metrics

Biology and Biochemistry

D-Index
50
Citations
16171
World Ranking
17423
National Ranking
7158

Thomas Girke publication distribution in Biology and Biochemistry in 2026

The chart shows the distribution of publications by all Research.com ranked scientists in the field of Biology and Biochemistry in 2026. The highlighted bar marks where Thomas Girke sits on this spectrum.

47–56 publications: 8 scientists 57–66 publications: 35 scientists 67–76 publications: 106 scientists 77–86 publications: 231 scientists 87–96 publications: 414 scientists 97–106 publications: 546 scientists 107–116 publications: 704 scientists 117–126 publications: 849 scientists 127–136 publications: 980 scientists 137–146 publications: 942 scientists 147–156 publications: 969 scientists 157–166 publications: 950 scientists 167–176 publications: 951 scientists 177–186 publications: 915 scientists 187–196 publications: 787 scientists 197–206 publications: 841 scientists 207–216 publications: 735 scientists 217–226 publications: 709 scientists 227–236 publications: 651 scientists 237–246 publications: 605 scientists 247–256 publications: 510 scientists 257–266 publications: 524 scientists 267–276 publications: 434 scientists 277–286 publications: 418 scientists 287–296 publications: 350 scientists 297–306 publications: 363 scientists 307–316 publications: 315 scientists 317–326 publications: 296 scientists 327–336 publications: 261 scientists 337–346 publications: 240 scientists 347–356 publications: 219 scientists 357–366 publications: 197 scientists 367–376 publications: 154 scientists 377–386 publications: 161 scientists 387–396 publications: 155 scientists 397–406 publications: 145 scientists 407–416 publications: 124 scientists 417–426 publications: 112 scientists 427–436 publications: 132 scientists 437–446 publications: 116 scientists 447–456 publications: 99 scientists 457–466 publications: 81 scientists 467–476 publications: 91 scientists 477–486 publications: 80 scientists 487–496 publications: 80 scientists 497–506 publications: 60 scientists 507–516 publications: 36 scientists 517–526 publications: 46 scientists 527–536 publications: 54 scientists 537–546 publications: 44 scientists 547–556 publications: 43 scientists 557–566 publications: 43 scientists 567–576 publications: 42 scientists 577–586 publications: 25 scientists 587–596 publications: 34 scientists 597–606 publications: 23 scientists 607–616 publications: 33 scientists 617–626 publications: 31 scientists 627–636 publications: 27 scientists 637–646 publications: 25 scientists 647–656 publications: 28 scientists 657–666 publications: 34 scientists 667–676 publications: 18 scientists 677–686 publications: 16 scientists 687–696 publications: 10 scientists 697–706 publications: 12 scientists 707–716 publications: 21 scientists 717–726 publications: 12 scientists 727–736 publications: 12 scientists 737–746 publications: 10 scientists 747–756 publications: 7 scientists 757–766 publications: 13 scientists 767–776 publications: 15 scientists 777–786 publications: 13 scientists 787–796 publications: 9 scientists 797–806 publications: 9 scientists 807–816 publications: 7 scientists 817–826 publications: 4 scientists 827–836 publications: 9 scientists 837–846 publications: 7 scientists 847–856 publications: 3 scientists 857–866 publications: 5 scientists 867–876 publications: 5 scientists 877–886 publications: 11 scientists 887–896 publications: 3 scientists 897–906 publications: 4 scientists 907–916 publications: 7 scientists 917–926 publications: 5 scientists 927–936 publications: 6 scientists 937–946 publications: 6 scientists 947–956 publications: 3 scientists 957–966 publications: 7 scientists 967–976 publications: 2 scientists 977–986 publications: 2 scientists 987–996 publications: 1 scientists 997–1,006 publications: 5 scientists 1,007–1,016 publications: 2 scientists 1,017–1,026 publications: 2 scientists 1,027 publications: 1 scientists 1,028+ publications: 100 scientists
47 publications 1,028+

This scientist: 108 publications — 8th percentile

8% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 1,028 publications or more.

Thomas Girke D-index placement in Biology and Biochemistry in 2026

The chart shows the D-index (discipline H-index) distribution of Biology and Biochemistry scientists ranked by Research.com in 2026. The highlighted bar marks where Thomas Girke sits on this spectrum.

40–41 D-Index: 80 scientists 42–43 D-Index: 183 scientists 44–45 D-Index: 317 scientists 46–47 D-Index: 504 scientists 48–49 D-Index: 718 scientists 50–51 D-Index: 900 scientists 52–53 D-Index: 1,026 scientists 54–55 D-Index: 1,150 scientists 56–57 D-Index: 1,236 scientists 58–59 D-Index: 1,253 scientists 60–61 D-Index: 1,163 scientists 62–63 D-Index: 1,131 scientists 64–65 D-Index: 1,032 scientists 66–67 D-Index: 897 scientists 68–69 D-Index: 814 scientists 70–71 D-Index: 715 scientists 72–73 D-Index: 709 scientists 74–75 D-Index: 596 scientists 76–77 D-Index: 512 scientists 78–79 D-Index: 473 scientists 80–81 D-Index: 412 scientists 82–83 D-Index: 373 scientists 84–85 D-Index: 358 scientists 86–87 D-Index: 285 scientists 88–89 D-Index: 273 scientists 90–91 D-Index: 227 scientists 92–93 D-Index: 208 scientists 94–95 D-Index: 193 scientists 96–97 D-Index: 153 scientists 98–99 D-Index: 157 scientists 100–101 D-Index: 148 scientists 102–103 D-Index: 120 scientists 104–105 D-Index: 113 scientists 106–107 D-Index: 100 scientists 108–109 D-Index: 86 scientists 110–111 D-Index: 67 scientists 112–113 D-Index: 72 scientists 114–115 D-Index: 73 scientists 116–117 D-Index: 64 scientists 118–119 D-Index: 53 scientists 120–121 D-Index: 60 scientists 122–123 D-Index: 54 scientists 124–125 D-Index: 43 scientists 126–127 D-Index: 38 scientists 128–129 D-Index: 49 scientists 130–131 D-Index: 26 scientists 132–133 D-Index: 18 scientists 134–135 D-Index: 23 scientists 136–137 D-Index: 32 scientists 138–139 D-Index: 32 scientists 140–141 D-Index: 27 scientists 142–143 D-Index: 19 scientists 144–145 D-Index: 22 scientists 146–147 D-Index: 12 scientists 148–149 D-Index: 16 scientists 150–151 D-Index: 14 scientists 152–153 D-Index: 10 scientists 154–155 D-Index: 13 scientists 156–157 D-Index: 10 scientists 158–159 D-Index: 7 scientists 160–161 D-Index: 9 scientists 162–163 D-Index: 13 scientists 164–165 D-Index: 4 scientists 166 D-Index: 4 scientists 167+ D-Index: 98 scientists
40 D-Index 167+

This scientist: 50 D-Index — 11th percentile

11% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 167 D-Index or more.

Overview

Thomas Girke is affiliated with the University of California, Riverside in the United States. Their research spans multiple areas within biochemistry, genetics, molecular biology, and agricultural and biological sciences. The scientist's work often focuses on molecular biology, plant science, insect science, oncology, and biophysics.

Girke's main research topics include:

  • Plant Molecular Biology Research
  • Plant responses to water stress
  • Plant nutrient uptake and metabolism
  • Gene expression and cancer classification
  • Histone Deacetylase Inhibitors Research
  • Peptidase Inhibition and Analysis
  • Bioinformatics and Genomic Networks

Their recent publications cover a range of subjects related to gene regulation, cellular stress resistance, and molecular mechanisms with implications for plant and human health. Notable recent papers include:

  • "Gene regulatory networks shape developmental plasticity of root cell types under water extremes in rice," 2022, Developmental Cell
  • "signatureSearch: environment for gene expression signature searching and functional interpretation," 2020, Nucleic Acids Research
  • "High-throughput small molecule screening reveals Nrf2-dependent and -independent pathways of cellular stress resistance," 2020, Science Advances
  • "Transcriptomic Evidence That Switching from Tobacco to Electronic Cigarettes Does Not Reverse Damage to the Respiratory Epithelium," 2022, Toxics
  • "MYC acetylated lysine residues drive oncogenic cell transformation and regulate select genetic programs for cell adhesion-independent growth and survival," 2023, Genes & Development

Thomas Girke frequently collaborates with several other researchers. Their most regular co-authors are:

  • Julia Bailey-Serres
  • Alexander Borowsky
  • Jianhai Zhang
  • Mauricio Reynoso
  • Germain Pauluzzi

Publications by Girke have appeared in a variety of scientific venues including:

  • Faculty of 1000 Research Ltd
  • bioRxiv (Cold Spring Harbor Laboratory)
  • Developmental Cell
  • Nucleic Acids Research
  • Genes & Development

Best Publications

  • Orchestrating high-throughput genomic analysis with Bioconductor

    Wolfgang Huber;Vincent J Carey;Robert Gentleman;Simon Anders

  • The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins.

    Clay J Carter;Songqin Pan;Jan Zouhar;Emily L. Avila

  • WUSCHEL protein movement mediates stem cell homeostasis in the Arabidopsis shoot apex

    Ram Kishor Yadav;Mariano Perales;Jérémy Gruel;Thomas Girke

  • Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis.

    Angelika Mustroph;M. Eugenia Zanetti;M. Eugenia Zanetti;Charles J. H. Jang;Hans E. Holtan

  • Contrapuntal Networks of Gene Expression during Arabidopsis Seed Filling

    Sari A. Ruuska;Thomas Girke;Christoph Benning;John B. Ohlrogge

  • Cloning and characterization of micrornas from rice

    Jian-Kang Zhu;Ramanjulu Sunkar

  • ChemMine tools: an online service for analyzing and clustering small molecules

    Tyler W. H. Backman;Yiqun Cao;Thomas Girke

  • Microarray Analysis of Developing Arabidopsis Seeds

    Thomas Girke;Jim Todd;Sari Ruuska;Joe White

  • Translational dynamics revealed by genome-wide profiling of ribosome footprints in Arabidopsis

    Piyada Juntawong;Thomas Girke;Jérémie Bazin;Jérémie Bazin;Julia Bailey-Serres

  • ChemmineR: a compound mining framework for R

    Yiqun Cao;Anna Charisi;Li-Chang Cheng;Tao Jiang

  • Gene expression map of the Arabidopsis shoot apical meristem stem cell niche.

    Ram Kishor Yadav;Thomas Girke;Sumana Pasala;Mingtang Xie

  • Differential mRNA translation contributes to gene regulation under non-stress and dehydration stress conditions in Arabidopsis thaliana.

    Riki Kawaguchi;Thomas Girke;Elizabeth A. Bray;Julia Bailey-Serres

  • Identification of a novel D6‐acyl‐group desaturase by targeted gene disruption in Physcomitrella patens

    Thomas Girke;Hermann Schmidt;Ulrich Zahringer;Ralf Reski

  • A New Set of Arabidopsis Expressed Sequence Tags from Developing Seeds. The Metabolic Pathway from Carbohydrates to Seed Oil

    Joseph A. White;Jim Todd;Tom Newman;Nicole Focks

  • A maximum common substructure-based algorithm for searching and predicting drug-like compounds

    Yiqun Cao;Tao Jiang;Thomas Girke

  • Tomato Susceptibility to Root-Knot Nematodes Requires an Intact Jasmonic Acid Signaling Pathway

    Kishor K. Bhattarai;Qi-Guang Xie;Sophie Mantelin;Usha Bishnoi

  • Annotating genes of known and unknown function by large-scale coexpression analysis.

    Kevin Horan;Charles Jang;Julia Bailey-Serres;Ron Mittler

  • Arabidopsis LATERAL ORGAN BOUNDARIES negatively regulates brassinosteroid accumulation to limit growth in organ boundaries

    Elizabeth M. Bell;Wan-ching Lin;Aman Y. Husbands;Lifeng Yu

  • systemPipeR: NGS workflow and report generation environment

    Tyler W. H. Backman;Thomas Girke

  • Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis

    Hailing Jin;Vladimir Vacic;Thomas Girke;Stefano Lonardi

Frequent Co-Authors

Julia Bailey-Serres
Julia Bailey-Serres University of California, Riverside
Tao Jiang
Tao Jiang University of California, Riverside
Christoph Benning
Christoph Benning Michigan State University
John B. Ohlrogge
John B. Ohlrogge Michigan State University
Natasha V. Raikhel
Natasha V. Raikhel University of California, Riverside
Sten Stymne
Sten Stymne Swedish University of Agricultural Sciences
Philip L. De Jager
Philip L. De Jager Columbia University
Simon Melov
Simon Melov Buck Institute for Research on Aging
Andrew P. Morris
Andrew P. Morris University of Liverpool
Inês Barroso
Inês Barroso University of Exeter

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