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Thomas Girke

D-Index & Metrics

Discipline name D-Index World Ranking Current World Ranking National Ranking Current National Ranking Publications Citations
Biology and Biochemistry 50 17415 15983 7154 6385 108 16171

Thomas Girke publications per year

The chart shows the history of publications by Thomas Girke between 1998 and 2025, highlighting the no. of papers published in each year and offering an overview of the publication velocity of this scholar. Thomas Girke published across 28 years, from 1998 to 2025, averaging 4.3 papers a year. Output peaked at 13 publications in 2013. 5 of the 121 publications appeared in the last two years.

No. of publications
5 10
Bar chart. Horizontal axis: year, 1998 to 2025. Vertical axis: number of publications, 0 to 13. Peak 13 publications in 2013. 1998: 1 publication 1999: 0 publications 2000: 12 publications 2001: 3 publications 2002: 2 publications 2003: 2 publications 2004: 5 publications 2005: 3 publications 2006: 3 publications 2007: 0 publications 2008: 7 publications 2009: 5 publications 2010: 3 publications 2011: 5 publications 2012: 3 publications 2013: 13 publications 2014: 9 publications 2015: 3 publications 2016: 9 publications 2017: 8 publications 2018: 3 publications 2019: 4 publications 2020: 6 publications 2021: 2 publications 2022: 2 publications 2023: 3 publications 2024: 3 publications 2025: 2 publications
1998 2025

121 publications in total across all disciplines

View publications per year as a table
Thomas Girke: publications per year, 1998 to 2025
Year Publications
1998 1
1999 0
2000 12
2001 3
2002 2
2003 2
2004 5
2005 3
2006 3
2007 0
2008 7
2009 5
2010 3
2011 5
2012 3
2013 13
2014 9
2015 3
2016 9
2017 8
2018 3
2019 4
2020 6
2021 2
2022 2
2023 3
2024 3
2025 2
Total 121
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Thomas Girke publication distribution in Biology and Biochemistry in 2026

The chart shows the distribution of publications by all Research.com ranked scientists in the field of Biology and Biochemistry in 2026. The highlighted bar marks where Thomas Girke sits on this spectrum.

No. of scientists
200 400 600 800
Bar chart with 100 bars. Horizontal axis: publications, 47–56 to 1,028+. Vertical axis: number of scientists, 0 to 980. Most scientists, 980, have 127–136 publications. The last bar groups every scientist with 1,028 publications or more. The highlighted bar, 107–116 publications, is where this scientist sits. 47–56 publications: 8 scientists 57–66 publications: 35 scientists 67–76 publications: 106 scientists 77–86 publications: 231 scientists 87–96 publications: 413 scientists 97–106 publications: 546 scientists 107–116 publications: 704 scientists 117–126 publications: 848 scientists 127–136 publications: 980 scientists 137–146 publications: 942 scientists 147–156 publications: 969 scientists 157–166 publications: 949 scientists 167–176 publications: 951 scientists 177–186 publications: 915 scientists 187–196 publications: 787 scientists 197–206 publications: 840 scientists 207–216 publications: 733 scientists 217–226 publications: 708 scientists 227–236 publications: 651 scientists 237–246 publications: 605 scientists 247–256 publications: 510 scientists 257–266 publications: 524 scientists 267–276 publications: 434 scientists 277–286 publications: 417 scientists 287–296 publications: 350 scientists 297–306 publications: 363 scientists 307–316 publications: 315 scientists 317–326 publications: 296 scientists 327–336 publications: 261 scientists 337–346 publications: 240 scientists 347–356 publications: 219 scientists 357–366 publications: 196 scientists 367–376 publications: 154 scientists 377–386 publications: 161 scientists 387–396 publications: 155 scientists 397–406 publications: 145 scientists 407–416 publications: 124 scientists 417–426 publications: 112 scientists 427–436 publications: 132 scientists 437–446 publications: 116 scientists 447–456 publications: 99 scientists 457–466 publications: 81 scientists 467–476 publications: 91 scientists 477–486 publications: 80 scientists 487–496 publications: 80 scientists 497–506 publications: 59 scientists 507–516 publications: 36 scientists 517–526 publications: 46 scientists 527–536 publications: 54 scientists 537–546 publications: 44 scientists 547–556 publications: 43 scientists 557–566 publications: 43 scientists 567–576 publications: 42 scientists 577–586 publications: 25 scientists 587–596 publications: 34 scientists 597–606 publications: 23 scientists 607–616 publications: 33 scientists 617–626 publications: 31 scientists 627–636 publications: 27 scientists 637–646 publications: 25 scientists 647–656 publications: 28 scientists 657–666 publications: 34 scientists 667–676 publications: 18 scientists 677–686 publications: 16 scientists 687–696 publications: 10 scientists 697–706 publications: 12 scientists 707–716 publications: 21 scientists 717–726 publications: 12 scientists 727–736 publications: 12 scientists 737–746 publications: 10 scientists 747–756 publications: 7 scientists 757–766 publications: 13 scientists 767–776 publications: 15 scientists 777–786 publications: 13 scientists 787–796 publications: 9 scientists 797–806 publications: 9 scientists 807–816 publications: 7 scientists 817–826 publications: 4 scientists 827–836 publications: 9 scientists 837–846 publications: 7 scientists 847–856 publications: 3 scientists 857–866 publications: 5 scientists 867–876 publications: 5 scientists 877–886 publications: 11 scientists 887–896 publications: 3 scientists 897–906 publications: 4 scientists 907–916 publications: 7 scientists 917–926 publications: 5 scientists 927–936 publications: 6 scientists 937–946 publications: 6 scientists 947–956 publications: 3 scientists 957–966 publications: 7 scientists 967–976 publications: 2 scientists 977–986 publications: 2 scientists 987–996 publications: 1 scientist 997–1,006 publications: 5 scientists 1,007–1,016 publications: 2 scientists 1,017–1,026 publications: 2 scientists 1,027 publications: 1 scientist 1,028+ publications: 100 scientists
47–56 publications 1,028+

This scientist: 108 publications — 8th percentile

8% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 1,028 publications or more.

View publications distribution as a table
Number of Biology and Biochemistry scientists by publication count, Research.com 2026 ranking edition. Based on 19,587 ranked scientists.
Publications Scientists This scientist
47–56 8
57–66 35
67–76 106
77–86 231
87–96 413
97–106 546
107–116 704 108
117–126 848
127–136 980
137–146 942
147–156 969
157–166 949
167–176 951
177–186 915
187–196 787
197–206 840
207–216 733
217–226 708
227–236 651
237–246 605
247–256 510
257–266 524
267–276 434
277–286 417
287–296 350
297–306 363
307–316 315
317–326 296
327–336 261
337–346 240
347–356 219
357–366 196
367–376 154
377–386 161
387–396 155
397–406 145
407–416 124
417–426 112
427–436 132
437–446 116
447–456 99
457–466 81
467–476 91
477–486 80
487–496 80
497–506 59
507–516 36
517–526 46
527–536 54
537–546 44
547–556 43
557–566 43
567–576 42
577–586 25
587–596 34
597–606 23
607–616 33
617–626 31
627–636 27
637–646 25
647–656 28
657–666 34
667–676 18
677–686 16
687–696 10
697–706 12
707–716 21
717–726 12
727–736 12
737–746 10
747–756 7
757–766 13
767–776 15
777–786 13
787–796 9
797–806 9
807–816 7
817–826 4
827–836 9
837–846 7
847–856 3
857–866 5
867–876 5
877–886 11
887–896 3
897–906 4
907–916 7
917–926 5
927–936 6
937–946 6
947–956 3
957–966 7
967–976 2
977–986 2
987–996 1
997–1,006 5
1,007–1,016 2
1,017–1,026 2
1,027 1
1,028+ 100
Download as CSV

Thomas Girke D-index placement in Biology and Biochemistry in 2026

The chart shows the D-index (discipline H-index) distribution of Biology and Biochemistry scientists ranked by Research.com in 2026. The highlighted bar marks where Thomas Girke sits on this spectrum.

No. of scientists
250 500 750 1,000 1,250
Bar chart with 65 bars. Horizontal axis: D-Index, 40–41 to 167+. Vertical axis: number of scientists, 0 to 1,253. Most scientists, 1,253, have 58–59 D-Index. The last bar groups every scientist with 167 D-Index or more. The highlighted bar, 50–51 D-Index, is where this scientist sits. 40–41 D-Index: 80 scientists 42–43 D-Index: 183 scientists 44–45 D-Index: 316 scientists 46–47 D-Index: 504 scientists 48–49 D-Index: 718 scientists 50–51 D-Index: 899 scientists 52–53 D-Index: 1,025 scientists 54–55 D-Index: 1,149 scientists 56–57 D-Index: 1,235 scientists 58–59 D-Index: 1,253 scientists 60–61 D-Index: 1,162 scientists 62–63 D-Index: 1,130 scientists 64–65 D-Index: 1,031 scientists 66–67 D-Index: 897 scientists 68–69 D-Index: 814 scientists 70–71 D-Index: 714 scientists 72–73 D-Index: 709 scientists 74–75 D-Index: 596 scientists 76–77 D-Index: 512 scientists 78–79 D-Index: 473 scientists 80–81 D-Index: 412 scientists 82–83 D-Index: 373 scientists 84–85 D-Index: 358 scientists 86–87 D-Index: 285 scientists 88–89 D-Index: 273 scientists 90–91 D-Index: 227 scientists 92–93 D-Index: 208 scientists 94–95 D-Index: 193 scientists 96–97 D-Index: 153 scientists 98–99 D-Index: 157 scientists 100–101 D-Index: 148 scientists 102–103 D-Index: 120 scientists 104–105 D-Index: 113 scientists 106–107 D-Index: 100 scientists 108–109 D-Index: 86 scientists 110–111 D-Index: 67 scientists 112–113 D-Index: 71 scientists 114–115 D-Index: 73 scientists 116–117 D-Index: 64 scientists 118–119 D-Index: 53 scientists 120–121 D-Index: 60 scientists 122–123 D-Index: 54 scientists 124–125 D-Index: 43 scientists 126–127 D-Index: 38 scientists 128–129 D-Index: 49 scientists 130–131 D-Index: 26 scientists 132–133 D-Index: 18 scientists 134–135 D-Index: 23 scientists 136–137 D-Index: 32 scientists 138–139 D-Index: 32 scientists 140–141 D-Index: 27 scientists 142–143 D-Index: 19 scientists 144–145 D-Index: 22 scientists 146–147 D-Index: 12 scientists 148–149 D-Index: 16 scientists 150–151 D-Index: 14 scientists 152–153 D-Index: 10 scientists 154–155 D-Index: 13 scientists 156–157 D-Index: 10 scientists 158–159 D-Index: 7 scientists 160–161 D-Index: 9 scientists 162–163 D-Index: 13 scientists 164–165 D-Index: 4 scientists 166 D-Index: 4 scientists 167+ D-Index: 98 scientists
40–41 D-Index 167+

This scientist: 50 D-Index — 11th percentile

11% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 167 D-Index or more.

View D-Index distribution as a table
Number of Biology and Biochemistry scientists by D-index, Research.com 2026 ranking edition. Based on 19,587 ranked scientists.
D-Index Scientists This scientist
40–41 80
42–43 183
44–45 316
46–47 504
48–49 718
50–51 899 50
52–53 1,025
54–55 1,149
56–57 1,235
58–59 1,253
60–61 1,162
62–63 1,130
64–65 1,031
66–67 897
68–69 814
70–71 714
72–73 709
74–75 596
76–77 512
78–79 473
80–81 412
82–83 373
84–85 358
86–87 285
88–89 273
90–91 227
92–93 208
94–95 193
96–97 153
98–99 157
100–101 148
102–103 120
104–105 113
106–107 100
108–109 86
110–111 67
112–113 71
114–115 73
116–117 64
118–119 53
120–121 60
122–123 54
124–125 43
126–127 38
128–129 49
130–131 26
132–133 18
134–135 23
136–137 32
138–139 32
140–141 27
142–143 19
144–145 22
146–147 12
148–149 16
150–151 14
152–153 10
154–155 13
156–157 10
158–159 7
160–161 9
162–163 13
164–165 4
166 4
167+ 98
Download as CSV

Overview

Thomas Girke is affiliated with the University of California, Riverside in the United States. Their research spans multiple areas within biochemistry, genetics, molecular biology, and agricultural and biological sciences. The scientist's work often focuses on molecular biology, plant science, insect science, oncology, and biophysics.

Girke's main research topics include:

  • Plant Molecular Biology Research
  • Plant responses to water stress
  • Plant nutrient uptake and metabolism
  • Gene expression and cancer classification
  • Histone Deacetylase Inhibitors Research
  • Peptidase Inhibition and Analysis
  • Bioinformatics and Genomic Networks

Their recent publications cover a range of subjects related to gene regulation, cellular stress resistance, and molecular mechanisms with implications for plant and human health. Notable recent papers include:

  • "Gene regulatory networks shape developmental plasticity of root cell types under water extremes in rice," 2022, Developmental Cell
  • "signatureSearch: environment for gene expression signature searching and functional interpretation," 2020, Nucleic Acids Research
  • "High-throughput small molecule screening reveals Nrf2-dependent and -independent pathways of cellular stress resistance," 2020, Science Advances
  • "Transcriptomic Evidence That Switching from Tobacco to Electronic Cigarettes Does Not Reverse Damage to the Respiratory Epithelium," 2022, Toxics
  • "MYC acetylated lysine residues drive oncogenic cell transformation and regulate select genetic programs for cell adhesion-independent growth and survival," 2023, Genes & Development

Thomas Girke frequently collaborates with several other researchers. Their most regular co-authors are:

  • Julia Bailey-Serres
  • Alexander Borowsky
  • Jianhai Zhang
  • Mauricio Reynoso
  • Germain Pauluzzi

Publications by Girke have appeared in a variety of scientific venues including:

  • Faculty of 1000 Research Ltd
  • bioRxiv (Cold Spring Harbor Laboratory)
  • Developmental Cell
  • Nucleic Acids Research
  • Genes & Development

Best Publications

  • Orchestrating high-throughput genomic analysis with Bioconductor

    Wolfgang Huber;Vincent J Carey;Robert Gentleman;Simon Anders

  • The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins.

    Clay J Carter;Songqin Pan;Jan Zouhar;Emily L. Avila

  • WUSCHEL protein movement mediates stem cell homeostasis in the Arabidopsis shoot apex

    Ram Kishor Yadav;Mariano Perales;Jérémy Gruel;Thomas Girke

  • Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis.

    Angelika Mustroph;M. Eugenia Zanetti;M. Eugenia Zanetti;Charles J. H. Jang;Hans E. Holtan

  • Contrapuntal Networks of Gene Expression during Arabidopsis Seed Filling

    Sari A. Ruuska;Thomas Girke;Christoph Benning;John B. Ohlrogge

  • Cloning and characterization of micrornas from rice

    Jian-Kang Zhu;Ramanjulu Sunkar

  • ChemMine tools: an online service for analyzing and clustering small molecules

    Tyler W. H. Backman;Yiqun Cao;Thomas Girke

  • Microarray Analysis of Developing Arabidopsis Seeds

    Thomas Girke;Jim Todd;Sari Ruuska;Joe White

  • Translational dynamics revealed by genome-wide profiling of ribosome footprints in Arabidopsis

    Piyada Juntawong;Thomas Girke;Jérémie Bazin;Jérémie Bazin;Julia Bailey-Serres

  • ChemmineR: a compound mining framework for R

    Yiqun Cao;Anna Charisi;Li-Chang Cheng;Tao Jiang

  • Gene expression map of the Arabidopsis shoot apical meristem stem cell niche.

    Ram Kishor Yadav;Thomas Girke;Sumana Pasala;Mingtang Xie

  • Differential mRNA translation contributes to gene regulation under non-stress and dehydration stress conditions in Arabidopsis thaliana.

    Riki Kawaguchi;Thomas Girke;Elizabeth A. Bray;Julia Bailey-Serres

  • Identification of a novel D6‐acyl‐group desaturase by targeted gene disruption in Physcomitrella patens

    Thomas Girke;Hermann Schmidt;Ulrich Zahringer;Ralf Reski

  • A New Set of Arabidopsis Expressed Sequence Tags from Developing Seeds. The Metabolic Pathway from Carbohydrates to Seed Oil

    Joseph A. White;Jim Todd;Tom Newman;Nicole Focks

  • A maximum common substructure-based algorithm for searching and predicting drug-like compounds

    Yiqun Cao;Tao Jiang;Thomas Girke

  • Tomato Susceptibility to Root-Knot Nematodes Requires an Intact Jasmonic Acid Signaling Pathway

    Kishor K. Bhattarai;Qi-Guang Xie;Sophie Mantelin;Usha Bishnoi

  • Annotating genes of known and unknown function by large-scale coexpression analysis.

    Kevin Horan;Charles Jang;Julia Bailey-Serres;Ron Mittler

  • Arabidopsis LATERAL ORGAN BOUNDARIES negatively regulates brassinosteroid accumulation to limit growth in organ boundaries

    Elizabeth M. Bell;Wan-ching Lin;Aman Y. Husbands;Lifeng Yu

  • systemPipeR: NGS workflow and report generation environment

    Tyler W. H. Backman;Thomas Girke

  • Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis

    Hailing Jin;Vladimir Vacic;Thomas Girke;Stefano Lonardi

Frequent Co-Authors

Julia Bailey-Serres
Julia Bailey-Serres University of California, Riverside
Tao Jiang
Tao Jiang University of California, Riverside
Christoph Benning
Christoph Benning Michigan State University
John B. Ohlrogge
John B. Ohlrogge Michigan State University
Natasha V. Raikhel
Natasha V. Raikhel University of California, Riverside
Sten Stymne
Sten Stymne Swedish University of Agricultural Sciences
Philip L. De Jager
Philip L. De Jager Columbia University
Simon Melov
Simon Melov Buck Institute for Research on Aging
Andrew P. Morris
Andrew P. Morris University of Liverpool
Inês Barroso
Inês Barroso University of Exeter

External Links

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Related Online Degrees & Career Pathways

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Best Scientists Citing Thomas Girke

Julia Bailey-Serres

Julia Bailey-Serres

University of California, Riverside

Publications: 66

John B. Ohlrogge

John B. Ohlrogge

Michigan State University

Publications: 35

Ralf Reski

Ralf Reski

University of Freiburg

Publications: 35

Jan U. Lohmann

Jan U. Lohmann

Heidelberg University

Publications: 28

Natasha V. Raikhel

Natasha V. Raikhel

University of California, Riverside

Publications: 27

Ivo Feussner

Ivo Feussner

University of Göttingen

Publications: 26

Alisdair R. Fernie

Alisdair R. Fernie

Max Planck Institute of Molecular Plant Physiology

Publications: 26

Mark D. Robinson

Mark D. Robinson

University of Zurich

Publications: 26

Gordon K. Smyth

Gordon K. Smyth

Walter and Eliza Hall Institute of Medical Research

Publications: 25

Christoph Benning

Christoph Benning

Michigan State University

Publications: 25

Francesco Licausi

Francesco Licausi

University of Oxford

Publications: 25

Johnathan A. Napier

Johnathan A. Napier

Rothamsted Research

Publications: 25

Matthew E. Ritchie

Matthew E. Ritchie

Walter and Eliza Hall Institute of Medical Research

Publications: 24

Yuling Jiao

Yuling Jiao

Institute of Genetics and Developmental Biology

Publications: 24

Elliot M. Meyerowitz

Elliot M. Meyerowitz

California Institute of Technology

Publications: 24

Enrico Martinoia

Enrico Martinoia

University of Zurich

Publications: 22

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