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Genetics

D-Index
71
Citations
26969
World Ranking
2160
National Ranking
56

Overview

Hsien-Da Huang is affiliated with the Chinese University of Hong Kong, Shenzhen in China. Their research spans the fields of Biochemistry, Genetics and Molecular Biology, with additional focus on Medicine.

The scientist has contributed to multiple subfields including Molecular Biology, Cancer Research, Pulmonary and Respiratory Medicine, Computational Theory and Mathematics, and Pharmacology.

Hsien-Da Huang's main research topics include:

  • MicroRNA in disease regulation
  • Cancer-related molecular mechanisms research
  • Computational Drug Discovery Methods
  • RNA modifications and cancer
  • RNA Research and Splicing
  • Machine Learning in Bioinformatics
  • RNA and protein synthesis mechanisms

Frequent publication venues for Hsien-Da Huang include:

  • Nucleic Acids Research
  • International Journal of Molecular Sciences
  • Briefings in Bioinformatics
  • bioRxiv (Cold Spring Harbor Laboratory)
  • SSRN Electronic Journal

Coauthors who have frequently collaborated with Hsien-Da Huang are:

  • Hsi-Yuan Huang
  • Yang-Chi-Dung Lin
  • Hua-Li Zuo
  • Yi-Gang Chen
  • Tzong-Yi Lee

Recent publications by Hsien-Da Huang include the following papers:

  • miRTarBase update 2022: an informative resource for experimentally validated miRNA-target interactions, 2021, Nucleic Acids Research
  • dbPTM in 2022: an updated database for exploring regulatory networks and functional associations of protein post-translational modifications, 2021, Nucleic Acids Research
  • Oral microbial dysbiosis and its performance in predicting oral cancer, 2020, Carcinogenesis
  • miRTarBase 2025: updates to the collection of experimentally validated microRNA-target interactions, 2024, Nucleic Acids Research
  • A panel of eight microRNAs is a good predictive parameter for triple-negative breast cancer relapse, 2020, Theranostics

Best Publications

  • miRTarBase update 2018: a resource for experimentally validated microRNA-target interactions.

    Chih Hung Chou;Sirjana Shrestha;Chi Dung Yang;Chi Dung Yang;Nai Wen Chang

  • miRTarBase 2016: updates to the experimentally validated miRNA-target interactions database

    Chih Hung Chou;Nai Wen Chang;Sirjana Shrestha;Sheng Da Hsu

  • miRTarBase: a database curates experimentally validated microRNA–target interactions

    Sheng-Da Hsu;Feng-Mao Lin;Wei-Yun Wu;Chao Liang

  • Fungal Small RNAs Suppress Plant Immunity by Hijacking Host RNA Interference Pathways

    Arne Weiberg;Ming Wang;Feng Mao Lin;Hongwei Zhao

  • miRTarBase update 2014: an information resource for experimentally validated miRNA-target interactions

    Sheng-Da Hsu;Yu-Ting Tseng;Sirjana Shrestha;Yu-Ling Lin

  • MicroRNA-122 plays a critical role in liver homeostasis and hepatocarcinogenesis

    Wei Chih Tsai;Sheng Da Hsu;Chu Sui Hsu;Tsung Ching Lai

  • α-ketoglutarate orchestrates macrophage activation through metabolic and epigenetic reprogramming

    Pu-Ste Liu;Haiping Wang;Xiaoyun Li;Tung Chao

  • MicroRNA-122, a tumor suppressor microRNA that regulates intrahepatic metastasis of hepatocellular carcinoma.

    Wei-Chih Tsai;Paul Wei-Che Hsu;Tsung Ching Lai;Gar-Yang Chau

  • Bidirectional cross-kingdom RNAi and fungal uptake of external RNAs confer plant protection

    Ming Wang;Arne Weiberg;Arne Weiberg;Feng Mao Lin;Bart P.H.J. Thomma

  • Arabidopsis Argonaute 2 regulates innate immunity via miRNA393*-mediated silencing of a Golgi-localized SNARE gene MEMB12

    Xiaoming Zhang;Hongwei Zhao;Shang Gao;Wei-Chi Wang

  • KinasePhos 2.0: a web server for identifying protein kinase-specific phosphorylation sites based on sequences and coupling patterns.

    Yung-Hao Wong;Tzong-Yi Lee;Han-Kuen Liang;Chia-Mao Huang

  • KinasePhos: a web tool for identifying protein kinase-specific phosphorylation sites

    Hsien Da Huang;Tzong Yi Lee;Shih Wei Tzeng;Jorng Tzong Horng

  • PlantPAN 2.0: an update of plant promoter analysis navigator for reconstructing transcriptional regulatory networks in plants.

    Chi Nga Chow;Han Qin Zheng;Nai Yun Wu;Chia Hung Chien

  • miRNAMap 2.0: genomic maps of microRNAs in metazoan genomes

    Sheng Da Hsu;Chia-Huei Chu;Ann Ping Tsou;Shu Jen Chen

  • Flow-Dependent Regulation of Krüppel-Like Factor 2 Is Mediated by MicroRNA-92a

    Wei Wu;Han Xiao;Andrés Laguna-Fernandez;Guadalupe Villarreal

  • PlantPAN: Plant promoter analysis navigator, for identifying combinatorial cis-regulatory elements with distance constraint in plant gene groups

    Wen Chi Chang;Tzong Yi Lee;Hsien Da Huang;His Yuan Huang

  • miR-103/107 promote metastasis of colorectal cancer by targeting the metastasis suppressors DAPK and KLF4

    Hsin Yi Chen;Yu Min Lin;Yu Min Lin;Hsiang Ching Chung;Hsiang Ching Chung;Yaw Dong Lang

  • An enhanced computational platform for investigating the roles of regulatory RNA and for identifying functional RNA motifs

    Tzu Hao Chang;Hsi Yuan Huang;Justin Bo Kai Hsu;Shun Long Weng

  • CircNet: a database of circular RNAs derived from transcriptome sequencing data

    Yu Chen Liu;Jian-Rong Li;Chuan-Hu Sun;Erik Andrews

  • MethHC: a database of DNA methylation and gene expression in human cancer

    Wei Yun Huang;Sheng Da Hsu;Hsi-Yuan Huang;Yi-Ming Sun

Frequent Co-Authors

John Y.-J. Shyy
John Y.-J. Shyy University of California, San Diego
Shu Chien
Shu Chien University of California, San Diego
Jan-Gowth Chang
Jan-Gowth Chang China Medical University
Oscar K. Lee
Oscar K. Lee National Yang Ming University
Hailing Jin
Hailing Jin University of California, Riverside
Michael Hsiao
Michael Hsiao Academia Sinica
Shinn-Ying Ho
Shinn-Ying Ho National Yang Ming Chiao Tung University
Alfred K. Cheung
Alfred K. Cheung University of Utah
Chih-Hsin Tang
Chih-Hsin Tang China Medical University
Lee-Jun C. Wong
Lee-Jun C. Wong Baylor College of Medicine

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