Shinn-Ying Ho

Overview

Best Publications

• Intelligent evolutionary algorithms for large parameter optimization problems

  Shinn-Ying Ho;Li-Sun Shu;Jian-Hung Chen

  345
  Citations

• OPSO: Orthogonal Particle Swarm Optimization and Its Application to Task Assignment Problems

  Shinn-Ying Ho;Hung-Sui Lin;Weei-Hurng Liauh;Shinn-Jang Ho

  316
  Citations

• Computational identification of ubiquitylation sites from protein sequences

  Chun Wei Tung;Shinn Ying Ho

  234
  Citations

• iPTREE-STAB

  Liang-Tsung Huang;M. Michael Gromiha;Shinn-Ying Ho

  218
  Citations

• NeurphologyJ: An automatic neuronal morphology quantification method and its application in pharmacological discovery

  Shinn-Ying Ho;Chih Yuan Chao;Hui Ling Huang;Tzai-Wen Chiu

  190
  Citations

• Accurate modeling and prediction of surface roughness by computer vision in turning operations using an adaptive neuro-fuzzy inference system

  Shinn-Ying Ho;Kuang Chyi Lee;Shih Shin Chen;Shinn Jang Ho

  187
  Citations

• SODOCK: swarm optimization for highly flexible protein-ligand docking.

  Hung Ming Chen;Bo Fu Liu;Hui Ling Huang;Shiow Fen Hwang

  165
  Citations

• Predicting and analyzing DNA-binding domains using a systematic approach to identifying a set of informative physicochemical and biochemical properties

  Hui-Ling Huang;I-Che Lin;Yi-Fan Liou;Chia-Ta Tsai

  156
  Citations

• POPI: predicting immunogenicity of MHC class I binding peptides by mining informative physicochemical properties.

  Chun Wei Tung;Shinn Ying Ho

  139
  Citations

• ProLoc-GO: Utilizing informative Gene Ontology terms for sequence-based prediction of protein subcellular localization

  Wen Lin Huang;Chun Wei Tung;Shih Wen Ho;Shiow Fen Hwang

  137
  Citations

• Design of an optimal nearest neighbor classifier using an intelligent genetic algorithm

  Shinn-Ying Ho;Chia-Cheng Liu;Soundy Liu

  131
  Citations

• Prediction and analysis of protein solubility using a novel scoring card method with dipeptide composition

  Hui Ling Huang;Phasit Charoenkwan;Te Fen Kao;Hua Chin Lee

  119
  Citations

• Design of accurate classifiers with a compact fuzzy-rule base using an evolutionary scatter partition of feature space

  Shinn-Ying Ho;Hung-Ming Chen;Shinn-Jang Ho;Tai-Kang Chen

  114
  Citations

• Inheritable genetic algorithm for biobjective 0/1 combinatorial optimization problems and its applications

  Shinn-Ying Ho;Jian-Hung Chen;Meng-Hsun Huang

  113
  Citations

• Accurate estimation of surface roughness from texture features of the surface image using an adaptive neuro-fuzzy inference system

  Kuang Chyi Lee;Shinn Jang Ho;Shinn-Ying Ho

  113
  Citations

• sRNAMap: genomic maps for small non-coding RNAs, their regulators and their targets in microbial genomes

  Hsi Yuan Huang;Heng Yi Chang;Chih Hung Chou;Ching-Ping Tseng

  108
  Citations

• Optimizing fuzzy neural networks for tuning PID controllers using an orthogonal simulated annealing algorithm OSA

  S.-J. Ho;Li-Sun Shu;Shinn-Ying Ho

  105
  Citations

• A novel approach to production planning of flexible manufacturing systems using an efficient multi-objective genetic algorithm

  Jian Hung Chen;Shinn-Ying Ho

  104
  Citations

• POPISK: T-cell reactivity prediction using support vector machines and string kernels

  Chun Wei Tung;Chun Wei Tung;Matthias Ziehm;Andreas Kämper;Oliver Kohlbacher

  90
  Citations

• Co-expression analysis identifies long noncoding RNA SNHG1 as a novel predictor for event-free survival in neuroblastoma

  Divya Sahu;Chia-Lang Hsu;Chen-Ching Lin;Tz-Wen Yang

  90
  Citations

• An Intelligent Two-Stage Evolutionary Algorithm for Dynamic Pathway Identification From Gene Expression Profiles

  Shinn-Ying Ho;Chih-Hung Hsieh;Fu-Chieh Yu;Hui-Ling Huang

  87
  Citations

• Design of an optimal nearest neighbor classifier using an intelligent genetic algorithm

  Shinn-Ying Ho;Chia-Cheng Liu;Soundy Liu;Jun-Wen Jou

  10
  Citations