D-Index & Metrics Best Publications

D-Index & Metrics D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines.

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Biology and Biochemistry D-index 65 Citations 53,410 304 World Ranking 5742 National Ranking 2733

Overview

What is he best known for?

The fields of study he is best known for:

  • Gene
  • Enzyme
  • DNA

The scientist’s investigation covers issues in Protein Data Bank, Crystallography, AutoDock, Protein Data Bank and Docking. The concepts of his Crystallography study are interwoven with issues in Protein structure, Twist and Base pair, DNA. David S. Goodsell combines subjects such as Biomedicine, Bioinformatics, Structural bioinformatics and Collaboratory, World Wide Web with his study of Protein Data Bank.

His Docking research focuses on Searching the conformational space for docking and Protein–ligand docking. The study incorporates disciplines such as Combinatorial chemistry and Simulated annealing in addition to Searching the conformational space for docking. His Lead Finder research incorporates themes from Scoring functions for docking and Molecular Docking Simulation.

His most cited work include:

  • AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility (9267 citations)
  • Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function (7789 citations)
  • A semiempirical free energy force field with charge-based desolvation. (1503 citations)

What are the main themes of his work throughout his whole career to date?

His scientific interests lie mostly in Cell biology, DNA, Protein Data Bank, Computational biology and Biochemistry. His biological study spans a wide range of topics, including Crystallography and Stereochemistry. His Protein Data Bank research incorporates elements of World Wide Web and Protein Data Bank.

His Protein Data Bank research includes themes of Bioinformatics and Structural bioinformatics. His Structural bioinformatics study frequently draws parallels with other fields, such as Collaboratory. His Netropsin study frequently involves adjacent topics like Hydrogen bond.

He most often published in these fields:

  • Cell biology (10.51%)
  • DNA (10.78%)
  • Protein Data Bank (14.02%)

What were the highlights of his more recent work (between 2017-2021)?

  • Protein Data Bank (14.02%)
  • Protein Data Bank (10.51%)
  • Structural biology (7.82%)

In recent papers he was focusing on the following fields of study:

Protein Data Bank, Protein Data Bank, Structural biology, Mesoscale meteorology and Visualization are his primary areas of study. The various areas that David S. Goodsell examines in his Protein Data Bank study include Biomedicine, Protein structure and function and Column. The Protein Data Bank study combines topics in areas such as Computational biology and Structural bioinformatics.

His Structural biology study incorporates themes from Pedagogy, Molecular graphics, Data science and Drug discovery. His research integrates issues of Digital painting, Docking and Reuse in his study of Visualization. The concepts of his Docking study are interwoven with issues in Proteomics, Small molecule and Irreversible binding.

Between 2017 and 2021, his most popular works were:

  • RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy. (409 citations)
  • RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy. (409 citations)
  • Protein Data Bank: the single global archive for 3D macromolecular structure data (192 citations)

In his most recent research, the most cited papers focused on:

  • Gene
  • Enzyme
  • DNA

His primary areas of study are Protein Data Bank, Protein Data Bank, Structural biology, Structural bioinformatics and Visualization. His Protein Data Bank study integrates concerns from other disciplines, such as Software engineering and Column. The Protein Data Bank study combines topics in areas such as Database, Master data and Atomic coordinates.

His Structural biology research is multidisciplinary, relying on both Protein structure and function, Molecular graphics, Computational biology and Drug discovery. His research in Structural bioinformatics intersects with topics in Collaboratory, Biomedicine and Biotechnology. His work deals with themes such as Digital painting and Computer graphics, Computer graphics, which intersect with Visualization.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility

Garrett M. Morris;Ruth Huey;William Lindstrom;Michel F. Sanner.
Journal of Computational Chemistry (2009)

15713 Citations

Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function

Garrett M. Morris;David S. Goodsell;Robert S. Halliday;Ruth Huey.
Journal of Computational Chemistry (1998)

11772 Citations

A semiempirical free energy force field with charge-based desolvation.

Ruth Huey;Garrett M. Morris;Arthur J. Olson;David S. Goodsell.
Journal of Computational Chemistry (2007)

2254 Citations

Automated docking of flexible ligands: applications of AutoDock.

David S. Goodsell;Garrett M. Morris;Arthur J. Olson.
Journal of Molecular Recognition (1996)

1757 Citations

Automated docking of substrates to proteins by simulated annealing.

David S. Goodsell;Arthur J. Olson.
Proteins (1990)

1574 Citations

The molecular origin of DNA-drug specificity in netropsin and distamycin

Mary L. Kopka;Chun Yoon;David Goodsell;Philip Pjura.
Proceedings of the National Academy of Sciences of the United States of America (1985)

1247 Citations

Distributed automated docking of flexible ligands to proteins: parallel applications of AutoDock 2.4.

Garrett M. Morris;David S. Goodsell;Ruth Huey;Arthur J. Olson.
Journal of Computer-aided Molecular Design (1996)

1190 Citations

Structural symmetry and protein function

David S. Goodsell;Arthur J. Olson.
Annual Review of Biophysics and Biomolecular Structure (2000)

1010 Citations

RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy.

Stephen K. Burley;Helen M. Berman;Charmi Bhikadiya;Chunxiao Bi.
Nucleic Acids Research (2019)

757 Citations

The RCSB protein data bank: integrative view of protein, gene and 3D structural information

Peter W. Rose;Andreas Prlić;Ali Altunkaya;Chunxiao Bi.
Nucleic Acids Research (2017)

739 Citations

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