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Genetics

D-Index
59
Citations
13357
World Ranking
3233
National Ranking
1404

Overview

David C. Samuels is affiliated with Vanderbilt University in the United States. Their research spans Medicine and Biochemistry, Genetics, and Molecular Biology, with published work emphasizing molecular biology, epidemiology, virology, genetics, and emergency medicine. The focus areas of their research include HIV research and treatment, HIV-related health complications and treatments, opioid use disorder treatment, substance abuse treatment and outcomes, RNA regulation and disease, RNA and protein synthesis mechanisms, and CRISPR and genetic engineering.

Their recent publications include the following papers:

  • MitoTrace: A Computational Framework for Analyzing Mitochondrial Variation in Single-Cell RNA Sequencing Data, 2023, Genes
  • LYSMD3: A mammalian pattern recognition receptor for chitin, 2021, Cell Reports
  • Plasma Arginine and Citrulline are Elevated in Diabetic Retinopathy, 2021, American Journal of Ophthalmology
  • Targeting diacylglycerol lipase reduces alcohol consumption in preclinical models, 2021, Journal of Clinical Investigation
  • EditPredict: Prediction of RNA editable sites with convolutional neural network, 2021, Genomics

They frequently publish in venues such as bioRxiv (Cold Spring Harbor Laboratory), Clinical Infectious Diseases, Journal of Biological Chemistry, Trends in Genetics, and Genes.

Frequent coauthors with whom David C. Samuels has collaborated include:

  • Todd Hulgan
  • Lori Schirle
  • Alvin D. Jeffery
  • Sandra Sanchez-Roige
  • Yan Guo

Their substantial work on HIV research and treatment reflects a multidisciplinary approach that integrates clinical infectious diseases, molecular biology, and genetic engineering methodologies. Their studies also address opioid use disorder and substance abuse treatment, which aligns with emerging concerns in public health and therapy optimization.

Overall, David C. Samuels's publication record demonstrates involvement in complex biological and medical research topics, with an emphasis on the molecular and genetic underpinnings of disease processes and therapeutic interventions.

Best Publications

  • Mitochondrial DNA mutations in human colonic crypt stem cells

    Robert W. Taylor;Martin J. Barron;Gillian M. Borthwick;Amy Gospel

  • Pathogenic Mitochondrial DNA Mutations Are Common in the General Population

    Hannah R. Elliott;David C. Samuels;James A. Eden;Caroline L. Relton

  • A reduction of mitochondrial DNA molecules during embryogenesis explains the rapid segregation of genotypes

    Lynsey M. Cree;David C. Samuels;Susana Chuva De Sousa Lopes;Harsha Karur Rajasimha

  • What causes mitochondrial DNA deletions in human cells

    Kim J Krishnan;Amy K Reeve;David C Samuels;Patrick F Chinnery

  • Universal heteroplasmy of human mitochondrial DNA

    Brendan A.I. Payne;Ian J. Wilson;Patrick Yu-Wai-Man;Jonathan Coxhead

  • Random Intracellular Drift Explains the Clonal Expansion of Mitochondrial DNA Mutations with Age

    Joanna Elson;David Samuels;Doug Turnbull;Patrick Chinnery

  • The inheritance of mitochondrial DNA heteroplasmy: random drift, selection or both?

    Patrick F Chinnery;David R Thorburn;David C Samuels;Sarah L White

  • Accumulation of mitochondrial DNA mutations in ageing, cancer, and mitochondrial disease: is there a common mechanism?

    Patrick F Chinnery;David C Samuels;Joanna Elson;Douglass M Turnbull

  • Mitochondrial aging is accelerated by anti-retroviral therapy through the clonal expansion of mtDNA mutations

    Brendan A I Payne;Brendan A I Payne;Ian J Wilson;Charlotte A Hateley;Rita Horvath

  • Relaxed Replication of mtDNA: A Model with Implications for the Expression of Disease

    Patrick F. Chinnery;David C. Samuels

  • Large scale comparison of gene expression levels by microarrays and RNAseq using TCGA data.

    Yan Guo;Quanhu Sheng;Jiang Li;Fei Ye

  • Two direct repeats cause most human mtDNA deletions

    David C. Samuels;Eric A. Schon;Patrick F. Chinnery

  • Identification of serum metabolites associating with chronic kidney disease progression and anti-fibrotic effect of 5-methoxytryptophan

    Dan-Qian Chen;Gang Cao;Hua Chen;Christos P. Argyopoulos

  • Epigenetics, epidemiology and mitochondrial DNA diseases

    Patrick Francis Chinnery;Hannah R Elliott;Gavin Hudson;David C Samuels

  • Illumina human exome genotyping array clustering and quality control

    Yan Guo;Jing He;Shilin Zhao;Hui Wu

  • Homeostatic Responses Regulate Selfish Mitochondrial Genome Dynamics in C. elegans.

    Bryan L. Gitschlag;Cait S. Kirby;David C. Samuels;Rama D. Gangula

  • Random Genetic Drift Determines the Level of Mutant mtDNA in Human Primary Oocytes

    D.T. Brown;D.C. Samuels;E.M. Michael;D.M. Turnbull

  • Three-stage quality control strategies for DNA re-sequencing data

    Yan Guo;Fei Ye;Quanghu Sheng;Travis Clark

  • Selection against Pathogenic mtDNA Mutations in a Stem Cell Population Leads to the Loss of the 3243A→G Mutation in Blood

    Harsha Karur Rajasimha;Patrick F. Chinnery;David C. Samuels

  • Genome measures used for quality control are dependent on gene function and ancestry

    Jing Wang;Leonid Raskin;David C. Samuels;Yu Shyr

Frequent Co-Authors

Patrick F. Chinnery
Patrick F. Chinnery University of Cambridge
Carlo F. Barenghi
Carlo F. Barenghi Newcastle University
Yu Shyr
Yu Shyr Vanderbilt University Medical Center
Ying-Yong Zhao
Ying-Yong Zhao Northwest University
Ronald J. Ellis
Ronald J. Ellis University of California, San Diego
Luísa Pereira
Luísa Pereira University of Porto
Scott Letendre
Scott Letendre University of California, San Diego
Donald Franklin
Donald Franklin University of California, San Diego
Robert W. Taylor
Robert W. Taylor Newcastle University
Douglass M. Turnbull
Douglass M. Turnbull Newcastle University

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