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Anatoly B. Kolomeisky

Anatoly B. Kolomeisky

Research.com Recognitions

  • 2015 - Fellow of American Physical Society (APS) Citation For major advances in the field of theoretical biophysics by fundamental contributions to the understanding of the mechanisms of motor proteins, cytoskeleton dynamics, protein nucleation, channel transport, and proteinDNA interactions
  • 2004 - Fellow of Alfred P. Sloan Foundation

Overview

Anatoly B. Kolomeisky is affiliated with Rice University in the United States and primarily works in the field of Biochemistry, Genetics and Molecular Biology, with a particular concentration on Molecular Biology. Their research spans several subfields including Genetics, Materials Chemistry, Microbiology, and Biomedical Engineering. The main topics addressed in their work include Protein Structure and Dynamics, RNA and protein synthesis mechanisms, Antimicrobial Peptides and Activities, Gene Regulatory Network Analysis, Advanced biosensing and bioanalysis techniques, Diffusion and Search Dynamics, and Evolution and Genetic Dynamics.

The scientific contributions of Anatoly B. Kolomeisky are documented through numerous publications in a variety of journals. Frequent publication venues include:

  • The Journal of Physical Chemistry Letters
  • bioRxiv (Cold Spring Harbor Laboratory)
  • The Journal of Physical Chemistry B
  • Biophysical Journal
  • The Journal of Chemical Physics

Several recent papers reflect the range of their research topics and collaborations:

  • Single C-to-T substitution using engineered APOBEC3G-nCas9 base editors with minimum genome- and transcriptome-wide off-target effects, 2020, Science Advances
  • Light-activated molecular machines are fast-acting broad-spectrum antibacterials that target the membrane, 2022, Science Advances
  • Mesoscopic protein-rich clusters host the nucleation of mutant p53 amyloid fibrils, 2021, Proceedings of the National Academy of Sciences
  • Direct detection of molecular intermediates from first-passage times, 2020, Science Advances
  • Formation of cellular close-ended tunneling nanotubes through mechanical deformation, 2022, Science Advances

Frequent collaborators in their research include:

  • Hamid Teimouri
  • Angela Medvedeva
  • Oleg A. Igoshin
  • Anupam Mondal
  • Srabanti Chaudhury

Anatoly B. Kolomeisky has been recognized with awards such as the Fellow of the American Physical Society (APS) in 2015 for contributions to theoretical biophysics, including studies on mechanisms of motor proteins, cytoskeleton dynamics, protein nucleation, channel transport, and protein-DNA interactions. Additionally, they were named a Fellow of the Alfred P. Sloan Foundation in 2004.

Best Publications

  • Molecular Motors: A Theorist's Perspective

    Anatoly B. Kolomeisky;Michael E. Fisher

  • Single-molecule analysis of DNA-protein complexes using nanopores.

    Breton Hornblower;Amy Coombs;Richard D Whitaker;Anatoly Kolomeisky

  • Simple mechanochemistry describes the dynamics of kinesin molecules.

    Michael E. Fisher;Anatoly B. Kolomeisky

  • Molecular machines open cell membranes

    Víctor García-López;Fang Chen;Lizanne G. Nilewski;Guillaume Duret

  • Polymer translocation through a long nanopore

    Elena Slonkina;Anatoly B. Kolomeisky

  • Kinetics of two-step nucleation of crystals

    Dimo Kashchiev;Peter G. Vekilov;Anatoly B. Kolomeisky

  • Dynamics of polymer translocation through nanopores: theory meets experiment.

    Silvina Matysiak;Alberto Montesi;Matteo Pasquali;Anatoly B. Kolomeisky

  • Nucleation of ordered solid phases of proteins via a disordered high-density state: Phenomenological approach

    Weichun Pan;Anatoly B. Kolomeisky;Peter G. Vekilov

  • A Simple Kinetic Model for Singlet Fission: A Role of Electronic and Entropic Contributions to Macroscopic Rates

    Anatoly B. Kolomeisky;Xintian Feng;Anna I. Krylov

  • A Simple Kinetic Model Describes the Processivity of Myosin-V

    Anatoly B. Kolomeisky;Michael E. Fisher

  • Speed-Selectivity Paradox in the Protein Search for Targets on DNA: Is It Real or Not?

    Alex Veksler;Anatoly B. Kolomeisky

  • ATP Hydrolysis Stimulates Large Length Fluctuations in Single Actin Filaments

    Evgeny B. Stukalin;Anatoly B. Kolomeisky

  • Protein--DNA interactions: reaching and recognizing the targets.

    A. G. Cherstvy;A. B. Kolomeisky;A. A. Kornyshev

  • Dissecting the Effect of Morphology on the Rates of Singlet Fission: Insights from Theory

    Xintian Feng;Anatoly B. Kolomeisky;Anna I. Krylov

  • Molecular Dynamics of Surface-Moving Thermally Driven Nanocars.

    Alexei V. Akimov;Alexander V. Nemukhin;Alexander A. Moskovsky;Anatoly B. Kolomeisky

  • Micrometer-scale translation and monitoring of individual nanocars on glass.

    Saumyakanti Khatua;Jason M Guerrero;Kevin Claytor;Guillaume Vives

  • Collective dynamics of processive cytoskeletal motors

    R. Tyler McLaughlin;Michael R. Diehl;Anatoly B. Kolomeisky

  • Channel-facilitated molecular transport across membranes: attraction, repulsion, and asymmetry.

    Anatoly B. Kolomeisky

  • Synthesis and Single-Molecule Imaging of Highly Mobile Adamantane-Wheeled Nanocars

    Pin-Lei E. Chu;Lin-Yung Wang;Saumyakanti Khatua;Anatoly B. Kolomeisky

  • Spontaneous symmetry breaking in two-channel asymmetric exclusion processes with narrow entrances

    Ekaterina Pronina;Anatoly B Kolomeisky

Frequent Co-Authors

Michael E. Fisher
Michael E. Fisher University of Maryland, College Park
Maxim N. Artyomov
Maxim N. Artyomov Washington University in St. Louis
Matteo Pasquali
Matteo Pasquali Rice University
Peter G. Vekilov
Peter G. Vekilov University of Houston
Alexei A. Kornyshev
Alexei A. Kornyshev Imperial College London
James M. Tour
James M. Tour Rice University
Amit Meller
Amit Meller Technion – Israel Institute of Technology
Bahman Anvari
Bahman Anvari University of California, Riverside
José N. Onuchic
José N. Onuchic Rice University
R. Bruce Weisman
R. Bruce Weisman Rice University

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