D-Index & Metrics Best Publications

D-Index & Metrics D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines.

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Genetics and Molecular Biology D-index 56 Citations 25,585 108 World Ranking 2916 National Ranking 1406

Overview

What is he best known for?

The fields of study he is best known for:

  • Gene
  • Genome
  • DNA

His scientific interests lie mostly in Genome, Computational biology, Genetics, Genomics and Sequence assembly. Adam M. Phillippy interconnects Evolutionary biology, DNA sequencing and Phylogenetic tree in the investigation of issues within Genome. Adam M. Phillippy has included themes like Sequence analysis, Contig and Sequence in his Computational biology study.

His work on Hybrid genome assembly, Phylogenetics, Tandem repeat and Insertion sequence as part of general Genetics study is frequently linked to Code, bridging the gap between disciplines. His Genomics research is multidisciplinary, incorporating elements of Human genome, Reference genome and Nanopore sequencing. Adam M. Phillippy performs integrative Sequence assembly and k-mer research in his work.

His most cited work include:

  • Versatile and open software for comparing large genomes (3736 citations)
  • Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation. (2446 citations)
  • Evolution of genes and genomes on the Drosophila phylogeny. (1731 citations)

What are the main themes of his work throughout his whole career to date?

Adam M. Phillippy mainly investigates Genome, Computational biology, Genetics, Sequence assembly and Genomics. His Genome research is multidisciplinary, relying on both Evolutionary biology and DNA sequencing. His study in Computational biology is interdisciplinary in nature, drawing from both Contig, Nanopore sequencing, Chromosome, Sequence and Sequence analysis.

His work on Minion as part of his general Nanopore sequencing study is frequently connected to Graph and Nanopore, thereby bridging the divide between different branches of science. His Whole genome sequencing, Hybrid genome assembly, Phylogenetics, Shotgun sequencing and Polymerase chain reaction study are his primary interests in Genetics. His specific area of interest is Genomics, where Adam M. Phillippy studies Contig Mapping.

He most often published in these fields:

  • Genome (76.79%)
  • Computational biology (47.02%)
  • Genetics (33.33%)

What were the highlights of his more recent work (between 2018-2021)?

  • Genome (76.79%)
  • Computational biology (47.02%)
  • Sequence assembly (29.17%)

In recent papers he was focusing on the following fields of study:

His primary areas of study are Genome, Computational biology, Sequence assembly, Gene and Reference genome. His Genome study is mostly concerned with Human genome and Genomics. His Genomics research incorporates themes from Echidna, Evolution of mammals and Platypus.

His work carried out in the field of Computational biology brings together such families of science as Nanopore sequencing, Allele, Sequence analysis, Human genetics and Metagenomics. His Gene study improves the overall literature in Genetics. His research investigates the connection between Reference genome and topics such as Annotation that intersect with issues in Shotgun, Genome project, Bovine genome and Protein coding.

Between 2018 and 2021, his most popular works were:

  • Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome. (281 citations)
  • Telomere-to-telomere assembly of a complete human X chromosome. (126 citations)
  • De novo assembly of the cattle reference genome with single-molecule sequencing. (81 citations)

In his most recent research, the most cited papers focused on:

  • Gene
  • Genome
  • DNA

Adam M. Phillippy mainly focuses on Genome, Computational biology, Sequence assembly, Human genome and Genomics. He combines subjects such as Evolutionary biology and Metagenomics with his study of Genome. His Computational biology research incorporates elements of Nanopore sequencing, Haplotype, Ploidy, Sequence analysis and RefSeq.

His research investigates the link between Nanopore sequencing and topics such as Segmental duplication that cross with problems in Allele. Sequence assembly is integrated with DNA sequencing, Contig and Gene duplication in his research. His biological study spans a wide range of topics, including Base sequence, Genomic library and Chromosome.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

Versatile and open software for comparing large genomes

Stefan Kurtz;Adam Phillippy;Arthur L Delcher;Michael Smoot.
Genome Biology (2004)

4316 Citations

Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation.

Sergey Koren;Brian P. Walenz;Konstantin Berlin;Jason R. Miller.
Genome Research (2017)

2637 Citations

Evolution of genes and genomes on the Drosophila phylogeny.

Andrew G. Clark;Michael B. Eisen;Michael B. Eisen;Douglas R. Smith;Casey M. Bergman.
Nature (2007)

1659 Citations

Nanopore sequencing and assembly of a human genome with ultra-long reads

Miten Jain;Sergey Koren;Karen H Miga;Josh Quick.
Nature Biotechnology (2018)

1290 Citations

Interactive metagenomic visualization in a Web browser

Brian D Ondov;Nicholas H Bergman;Adam M Phillippy.
BMC Bioinformatics (2011)

1092 Citations

Hybrid error correction and de novo assembly of single-molecule sequencing reads

Sergey Koren;Michael C Schatz;Brian P Walenz;Jeffrey Martin.
Nature Biotechnology (2012)

1076 Citations

Fast algorithms for large-scale genome alignment and comparison

Arthur L. Delcher;Adam Phillippy;Jane Carlton;Steven L. Salzberg.
Nucleic Acids Research (2002)

1062 Citations

Mash: fast genome and metagenome distance estimation using MinHash.

Brian D. Ondov;Todd J. Treangen;Páll Melsted;Adam B. Mallonee.
Genome Biology (2016)

990 Citations

The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes.

Todd J Treangen;Brian D Ondov;Sergey Koren;Adam M Phillippy.
Genome Biology (2014)

855 Citations

GAGE: A critical evaluation of genome assemblies and assembly algorithms

Steven L. Salzberg;Adam M. Phillippy;Aleksey Zimin;Daniela Puiu.
Genome Research (2012)

813 Citations

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