Sergey Koren mainly focuses on Computational biology, Genome, Genetics, Sequence assembly and Genomics. His Computational biology research includes elements of Sequence, Sequence analysis, Contig Mapping and Metagenomics. His study in the fields of Hybrid genome assembly, Human genome and Whole genome sequencing under the domain of Genome overlaps with other disciplines such as Data set.
His research in Genetics intersects with topics in Babesiosis and Ixodes, Ecology, Tick. He combines subjects such as k-mer, Reference genome and Nanopore sequencing with his study of Genomics. His Earth Microbiome Project study combines topics from a wide range of disciplines, such as Bioinformatics, Enterotype, Ecology, Gastrointestinal Microbiome and Oral Microbiome.
The scientist’s investigation covers issues in Genome, Computational biology, Sequence assembly, Genetics and Genomics. Genome connects with themes related to DNA sequencing in his study. His Computational biology study integrates concerns from other disciplines, such as Contig, Nanopore sequencing, Chromosome, Sequence analysis and Metagenomics.
His work in the fields of Genetics, such as Hybrid genome assembly, overlaps with other areas such as Ixodes scapularis. In his works, Sergey Koren undertakes multidisciplinary study on Genomics and Algorithm. His Gene course of study focuses on Evolutionary biology and Haplotype, Phylogenetic tree and Gene duplication.
Sergey Koren mostly deals with Genome, Sequence assembly, Computational biology, Reference genome and Gene. His studies in Genome integrate themes in fields like Evolutionary biology, Chromosome and Haplotype. His Computational biology study frequently draws parallels with other fields, such as Sequence analysis.
Sergey Koren has included themes like Annotation, Human genetics, Locus and Copy-number variation in his Reference genome study. Gene is a subfield of Genetics that Sergey Koren investigates. The concepts of his Genomics study are interwoven with issues in Genome project and Phred quality score.
Sergey Koren mainly investigates Genome, Reference genome, Computational biology, Sequence assembly and Genomics. His research brings together the fields of Haplotype and Genome. Sergey Koren has researched Reference genome in several fields, including Evolutionary biology and Annotation.
His Evolutionary biology research incorporates themes from Vertebrate and Copy-number variation. His work carried out in the field of Computational biology brings together such families of science as Human genome, Sequence analysis and Nanopore sequencing. In his works, Sergey Koren performs multidisciplinary study on Genomics and Nanopore.
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Structure, function and diversity of the healthy human microbiome
Curtis Huttenhower;Curtis Huttenhower;Dirk Gevers;Rob Knight;Rob Knight;Sahar Abubucker.
Nature (2012)
Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation.
Sergey Koren;Brian P. Walenz;Konstantin Berlin;Jason R. Miller.
Genome Research (2017)
A framework for human microbiome research
Barbara A. Methé;Karen E. Nelson;Mihai Pop;Heather H. Creasy.
Nature (2012)
Assembly algorithms for next-generation sequencing data.
Jason R. Miller;Sergey Koren;Granger Sutton.
Genomics (2010)
Nanopore sequencing and assembly of a human genome with ultra-long reads
Miten Jain;Sergey Koren;Karen H Miga;Josh Quick.
Nature Biotechnology (2018)
Hybrid error correction and de novo assembly of single-molecule sequencing reads
Sergey Koren;Michael C Schatz;Brian P Walenz;Jeffrey Martin.
Nature Biotechnology (2012)
Mash: fast genome and metagenome distance estimation using MinHash.
Brian D. Ondov;Todd J. Treangen;Páll Melsted;Adam B. Mallonee.
Genome Biology (2016)
The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes.
Todd J Treangen;Brian D Ondov;Sergey Koren;Adam M Phillippy.
Genome Biology (2014)
GAGE: A critical evaluation of genome assemblies and assembly algorithms
Steven L. Salzberg;Adam M. Phillippy;Aleksey Zimin;Daniela Puiu.
Genome Research (2012)
Assembling large genomes with single-molecule sequencing and locality-sensitive hashing
Konstantin Berlin;Konstantin Berlin;Sergey Koren;Chen-Shan Chin;James P Drake.
Nature Biotechnology (2015)
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