World's Best Scientists 2026 revealed!

D-Index & Metrics

Computer Science

D-Index
76
Citations
41259
World Ranking
1310
National Ranking
175

Overview

Yu Xue is affiliated with Nanjing University of Information Science and Technology in China. Their research primarily spans the fields of Medicine and Biochemistry, Genetics and Molecular Biology, with notable focus in subfields such as Molecular Biology, Infectious Diseases, Epidemiology, Oncology, and Physiology.

The scientist's work covers key topics including Autophagy in Disease and Therapy, COVID-19 Clinical Research Studies, Machine Learning in Bioinformatics, SARS-CoV-2 and COVID-19 Research, Genomics and Phylogenetic Studies, RNA and Protein Synthesis Mechanisms, and Ubiquitin and Proteasome Pathways.

Yu Xue has contributed to several recent papers, some of which are:

  • Plasma Proteomics Identify Biomarkers and Pathogenesis of COVID-19, 2020, published in Immunity
  • GPS 5.0: An Update on the Prediction of Kinase-Specific Phosphorylation Sites in Proteins, 2020, published in Genomics Proteomics & Bioinformatics
  • AnimalTFDB 4.0: a comprehensive animal transcription factor database updated with variation and expression annotations, 2022, published in Nucleic Acids Research
  • Open resource of clinical data from patients with pneumonia for the prediction of COVID-19 outcomes via deep learning, 2020, published in Nature Biomedical Engineering
  • Metformin activates chaperone-mediated autophagy and improves disease pathologies in an Alzheimer disease mouse model, 2021, published in Protein & Cell

Among their frequent coauthors are Di Peng, Wanshan Ning, Yujie Gou, Chenwei Wang, and Jia Zhou.

The scientist often publishes in reputable venues, with a majority of their works appearing in:

  • Nature Communications
  • Nucleic Acids Research
  • SSRN Electronic Journal
  • Research Square (Research Square)
  • Cells

Best Publications

  • Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)

    Daniel J. Klionsky;Amal Kamal Abdel-Aziz;Sara Abdelfatah;Mahmoud Abdellatif

  • Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition)

    Daniel J. Klionsky;Kotb Abdelmohsen;Akihisa Abe;Joynal Abedin

  • IBS: an illustrator for the presentation and visualization of biological sequences.

    Wenzhong Liu;Yubin Xie;Jiyong Ma;Xiaotong Luo

  • HemI: a toolkit for illustrating heatmaps.

    Wankun Deng;Yongbo Wang;Zexian Liu;Han Cheng

  • Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition)

    Daniel J. Klionsky;Kotb Abdelmohsen;Akihisa Abe;Joynal Abedin

  • GPS 2.0, a Tool to Predict Kinase-specific Phosphorylation Sites in Hierarchy

    Yu Xue;Jian Ren;Xinjiao Gao;Changjiang Jin

  • DOG 1.0: illustrator of protein domain structures.

    Jian Ren;Longping Wen;Xinjiao Gao;Changjiang Jin

  • CSS-Palm 2.0: an updated software for palmitoylation sites prediction.

    Jian Ren;Longping Wen;Xinjiao Gao;Changjiang Jin

  • GPS-SUMO: a tool for the prediction of sumoylation sites and SUMO-interaction motifs

    Qi Zhao;Yubin Xie;Yueyuan Zheng;Shuai Jiang

  • A rapid learning algorithm for vehicle classification

    Xuezhi Wen;Ling Shao;Yu Xue;Wei Fang

  • Stabilization effect of traffic flow in an extended car-following model based on an intelligent transportation system application.

    H. X. Ge;S. Q. Dai;L. Y. Dong;Y. Xue

  • A self-adaptive artificial bee colony algorithm based on global best for global optimization

    Yu Xue;Jiongming Jiang;Binping Zhao;Tinghuai Ma

  • A hybrid feature selection algorithm for gene expression data classification

    Huijuan Lu;Junying Chen;Ke Yan;Qun Jin

  • Self-Adaptive Particle Swarm Optimization for Large-Scale Feature Selection in Classification

    Yu Xue;Bing Xue;Mengjie Zhang

  • A novel oriented cuckoo search algorithm to improve DV-Hop performance for cyberphysical systems

    Zhihua Cui;Bin Sun;Gaige Wang;Yu Xue

  • GPS: a comprehensive www server for phosphorylation sites prediction

    Yu Xue;Fengfeng Zhou;Minjie Zhu;Kashif Ahmed

  • GPS-SNO: computational prediction of protein S-nitrosylation sites with a modified GPS algorithm.

    Yu Xue;Zexian Liu;Xinjiao Gao;Changjiang Jin

  • GPS 2.1: enhanced prediction of kinase-specific phosphorylation sites with an algorithm of motif length selection

    Yu Xue;Yu Xue;Zexian Liu;Jun Cao;Qian Ma

  • GPS 5.0: An Update on the Prediction of Kinase-specific Phosphorylation Sites in Proteins.

    Chenwei Wang;Haodong Xu;Shaofeng Lin;Wankun Deng

  • Text classification based on deep belief network and softmax regression

    Mingyang Jiang;Yanchun Liang;Xiaoyue Feng;Xiaojing Fan

  • Systematic study of protein sumoylation: Development of a site-specific predictor of SUMOsp 2.0

    Jian Ren;Xinjiao Gao;Changjiang Jin;Mei Zhu

Frequent Co-Authors

Xuebiao Yao
Xuebiao Yao University of Science and Technology of China
Shifei Ding
Shifei Ding China University of Mining and Technology
Longping Wen
Longping Wen South China University of Technology
Licheng Jiao
Licheng Jiao Xidian University
Tiago F. Outeiro
Tiago F. Outeiro University of Göttingen
Evelina Gatti
Evelina Gatti Aix-Marseille University
Boris Zhivotovsky
Boris Zhivotovsky Karolinska Institute
Sergio Lavandero
Sergio Lavandero University of Chile
Ferrante Neri
Ferrante Neri University of Nottingham
Beth Levine
Beth Levine The University of Texas Southwestern Medical Center

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