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Biology and Biochemistry

D-Index
52
Citations
12425
World Ranking
16538
National Ranking
1185

Overview

Shigehiro Kuraku is affiliated with the National Institute of Genetics in Japan. Their research primarily falls within the broad field of Biochemistry, Genetics, and Molecular Biology, with a particular focus on Molecular Biology, Genetics, Nature and Landscape Conservation, Plant Science, and Immunology.

The scientist's work spans several main topics, including Genomics and Phylogenetic Studies, Chromosomal and Genetic Variations, Ichthyology and Marine Biology, Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities, Aquaculture disease management and microbiota, Genetic diversity and population structure, and Genomics and Chromatin Dynamics. This range of subjects illustrates a diverse scope centered on genetic and genomic research as well as conservation biology.

Shigehiro Kuraku's publication record includes significant contributions to various reputable scientific venues. The most frequent publication venues include bioRxiv (Cold Spring Harbor Laboratory), Proceedings of the National Academy of Sciences, eLife, F1000Research, and Molecular Ecology.

Their recent papers demonstrate involvement in high-impact scientific discussions and developments. These include:

  • The Earth BioGenome Project 2020: Starting the clock, 2022, Proceedings of the National Academy of Sciences
  • Why sequence all eukaryotes?, 2022, Proceedings of the National Academy of Sciences
  • Multifaceted Hi-C benchmarking: what makes a difference in chromosome-scale genome scaffolding?, 2020, GigaScience
  • Ten Years of Collaborative Progress in the Quest for Orthologs, 2021, Molecular Biology and Evolution
  • Technical considerations in Hi-C scaffolding and evaluation of chromosome-scale genome assemblies, 2021, Molecular Ecology

Collaboration is a significant aspect of their research activities. Frequent coauthors of Shigehiro Kuraku include Mitsutaka Kadota, Osamu Nishimura, Kazuaki Yamaguchi, Yoshinobu Uno, and Susumu Hyodo, showing sustained partnerships across multiple scientific projects.

Best Publications

  • Asymmetric paralog evolution between the “cryptic” gene Bmp16 and its well-studied sister genes Bmp2 and Bmp4

    Nathalie Feiner;Fumio Motone;Axel Meyer;Shigehiro Kuraku

  • The African coelacanth genome provides insights into tetrapod evolution

    Chris T. Amemiya;Chris T. Amemiya;Jessica Alfoldi;Alison P. Lee;Shaohua Fan

  • aLeaves facilitates on-demand exploration of metazoan gene family trees on MAFFT sequence alignment server with enhanced interactivity.

    Shigehiro Kuraku;Christian M. Zmasek;Osamu Nishimura;Kazutaka Katoh

  • Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution

    Jeramiah J. Smith;Shigehiro Kuraku;Carson Holt;Tatjana Sauka-Spengler

  • The draft genomes of soft-shell turtle and green sea turtle yield insights into the development and evolution of the turtle-specific body plan

    Zhuo Wang;Juan Pascual-Anaya;Amonida Zadissa;Wenqi Li

  • Timing of Genome Duplications Relative to the Origin of the Vertebrates: Did Cyclostomes Diverge before or after?

    Shigehiro Kuraku;Axel Meyer;Shigeru Kuratani

  • gVolante for standardizing completeness assessment of genome and transcriptome assemblies

    Osamu Nishimura;Yuichiro Hara;Shigehiro Kuraku

  • Time Scale for Cyclostome Evolution Inferred with a Phylogenetic Diagnosis of Hagfish and Lamprey cDNA Sequences

    Shigehiro Kuraku;Shigeru Kuratani

  • Hagfish embryology with reference to the evolution of the neural crest

    Kinya G. Ota;Shigehiro Kuraku;Shigeru Kuratani

  • Rapid evolution and selection inferred from the transcriptomes of sympatric crater lake cichlid fishes

    Kathryn Elmer;Shaohua Fan;Helen Gunter;Julia Jones

  • Shark genomes provide insights into elasmobranch evolution and the origin of vertebrates

    Yuichiro Hara;Kazuaki Yamaguchi;Koh Onimaru;Mitsutaka Kadota

  • Evolutionary biology: lamprey Hox genes and the evolution of jaws.

    Yoko Takio;Massimo Pasqualetti;Shigehiro Kuraku;Shigeki Hirano

  • Monophyly of lampreys and hagfishes supported by nuclear DNA-coded genes.

    Shigehiro Kuraku;Daisuke Hoshiyama;Kazutaka Katoh;Hiroshi Suga

  • Craniofacial development of hagfishes and the evolution of vertebrates.

    Yasuhiro Oisi;Kinya G. Ota;Shigehiro Kuraku;Satoko Fujimoto

  • Tissue preferential expression of estrogen receptor gene in the marine snail, Thais clavigera

    Masaaki Kajiwara;Shigehiro Kuraku;Takako Kurokawa;Kenichi Kato

  • The evolution and maintenance of Hox gene clusters in vertebrates and the teleost-specific genome duplication

    Shigehiro Kuraku;Axel Meyer

  • Lamprey as an Evo-Devo Model: Lessons From Comparative Embryology and Molecular Phylogenetics

    Shigeru Kuratani;Shigehiro Kuraku;Yasunori Murakami

  • Basal jawed vertebrate phylogeny inferred from multiple nuclear DNA-coded genes

    Kanae Kikugawa;Kazutaka Katoh;Shigehiro Kuraku;Hiroshi Sakurai

  • Mammalian Reverse Genetics without Crossing Reveals Nr3a as a Short-Sleeper Gene.

    Genshiro A. Sunagawa;Kenta Sumiyama;Maki Ukai-Tadenuma;Dimitri Perrin;Dimitri Perrin

  • Hagfishembryologywithreferencetotheevolutionof the neural crest

    Kinya G. Ota;Shigehiro Kuraku;Shigeru Kuratani

Frequent Co-Authors

James Sharpe
James Sharpe European Bioinformatics Institute
Kiyokazu Agata
Kiyokazu Agata National Institute for Basic Biology
Yoichi Matsuda
Yoichi Matsuda Nagoya University
Massimo Pasqualetti
Massimo Pasqualetti University of Pisa
J. Joshua Smith
J. Joshua Smith Memorial Sloan Kettering Cancer Center
Chris T. Amemiya
Chris T. Amemiya University of California, Merced
Hiroshi Kiyonari
Hiroshi Kiyonari RIKEN Center for Biosystems Dynamics Research
Hiroshi Hamada
Hiroshi Hamada RIKEN Center for Biosystems Dynamics Research
Vincent Laudet
Vincent Laudet Okinawa Institute of Science and Technology

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