Ronald M. Levy

Research.com Recognitions

• 2009 - King Faisal Prize
• 2007 - Member of the National Academy of Medicine (NAM)
• 1997 - Fellow of the American Association for the Advancement of Science (AAAS)
• 1995 - Fellow of John Simon Guggenheim Memorial Foundation
• 1982 - Fellow of Alfred P. Sloan Foundation
• Member of the Association of American Physicians
• Member of the Association of American Physicians
• Member of the Association of American Physicians
• Member of the Association of American Physicians
• Member of the Association of American Physicians

Overview

Best Publications

• Integrated Modeling Program, Applied Chemical Theory (IMPACT).

  Jay L. Banks;Hege S. Beard;Yixiang X. Cao;Art E. Cho

  1609
  Citations

• Enthalpy−Entropy and Cavity Decomposition of Alkane Hydration Free Energies: Numerical Results and Implications for Theories of Hydrophobic Solvation

  E. Gallicchio;and M. M. Kubo;R. M. Levy

  430
  Citations

• AGBNP: an analytic implicit solvent model suitable for molecular dynamics simulations and high-resolution modeling.

  Emilio Gallicchio;Ronald M. Levy

  403
  Citations

• Structural Organization of Bacterial RNA Polymerase Holoenzyme and the RNA Polymerase-Promoter Open Complex

  Vladimir Mekler;Ekaterine Kortkhonjia;Ekaterine Kortkhonjia;Jayanta Mukhopadhyay;Jayanta Mukhopadhyay;Jennifer Knight

  359
  Citations

• COMPUTER SIMULATIONS WITH EXPLICIT SOLVENT: Recent Progress in the Thermodynamic Decomposition of Free Energies and in Modeling Electrostatic Effects

  Ronald M. Levy;Emilio Gallicchio

  343
  Citations

• On the nonpolar hydration free energy of proteins: Surface area and continuum solvent models for the solute-solvent interaction energy

  Ronald M Levy;Linda Y Zhang;Emilio Gallicchio;Anthony K Felts

  338
  Citations

• Simplified amino acid alphabets for protein fold recognition and implications for folding.

  Lynne Reed Murphy;Anders Wallqvist;Ronald M. Levy

  327
  Citations

• Evaluation of the configurational entropy for proteins: application to molecular dynamics simulations of an α-helix

  Ronald M. Levy;Martin Karplus;Joseph Kushick;David Perahia

  315
  Citations

• The SGB/NP hydration free energy model based on the surface generalized born solvent reaction field and novel nonpolar hydration free energy estimators

  Emilio Gallicchio;Linda Yu Zhang;Ronald M. Levy

  303
  Citations

• Quasi-harmonic method for studying very low frequency modes in proteins

  R. M. Levy;A. R. Srinivasan;W. K. Olson;J. A. McCammon

  303
  Citations

• Conformational analysis of the DFG-out kinase motif and biochemical profiling of structurally validated type II inhibitors.

  R. S. K. Vijayan;Peng He;Vivek Modi;Krisna C. Duong-Ly

  264
  Citations

• Antibacterial Peptide Microcin J25 Inhibits Transcription by Binding within and Obstructing the RNA Polymerase Secondary Channel

  Jayanta Mukhopadhyay;Elena Sineva;Elena Sineva;Jennifer Knight;Ronald M. Levy

  263
  Citations

• Computer simulations of the dielectric properties of water: Studies of the simple point charge and transferrable intermolecular potential models

  Howard E. Alper;Ronald M. Levy

  259
  Citations

• An Anisotropic Polarizable Water Model: Incorporation of All-Atom Polarizabilities into Molecular Mechanics Force Fields

  Dan N. Bernardo;Yanbo Ding;Karsten Krogh-Jespersen;Ronald M. Levy

  258
  Citations

• Temperature weighted histogram analysis method, replica exchange, and transition paths.

  Emilio Gallicchio;Michael Andrec;and Anthony K. Felts;Ronald M. Levy

  220
  Citations

• Structural reorganization of α-synuclein at low pH observed by NMR and REMD simulations

  Kuen-Phon Wu;Daniel S. Weinstock;Chitra Narayanan;Ronald M. Levy

  217
  Citations

• Effect of anisotropy and anharmonicity on protein crystallographic refinement: An evaluation by molecular dynamics

  John Kuriyan;John Kuriyan;Gregory A. Petsko;Ronald M. Levy;Martin Karplus

  209
  Citations

• Gaussian fluctuation formula for electrostatic free‐energy changes in solution

  Ronald M. Levy;Mahfoud Belhadj;Douglas B. Kitchen

  205
  Citations

• Molecular dynamics simulation of solvated protein at high pressure

  Douglas B. Kitchen;Lynne H. Reed;Ronald M. Levy

  203
  Citations

• Theory of binless multi-state free energy estimation with applications to protein-ligand binding.

  Zhiqiang Tan;Emilio Gallicchio;Mauro Lapelosa;Ronald M. Levy

  199
  Citations

• Diffusive langevin dynamics of model alkanes

  Ronald M. Levy;Martin Karplus;J. Andrew McCammon

  196
  Citations