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Microbiology

D-Index
75
Citations
20317
World Ranking
1499
National Ranking
16

Overview

Petri Auvinen is affiliated with the University of Helsinki in Finland. Their research primarily spans the fields of Biochemistry, Genetics and Molecular Biology, with significant contributions also in Medicine. The work touches upon major subfields including Molecular Biology, Biotechnology, Plant Science, Neurology, and Genetics.

The scientist's research centers on topics such as Gut microbiota and health, Parkinson's Disease Mechanisms and Treatments, Dysphagia Assessment and Management, Listeria monocytogenes in Food Safety, Genomics and Phylogenetic Studies, Identification and Quantification in Food, and Microbial Inactivation Methods.

Frequent co-authors collaborating with Petri Auvinen include Lars Paulín, Pia Laine, Filip Scheperjans, Ilhan Cem Duru, and Pedro A. B. Pereira. These collaborations have supported research output across multiple areas of molecular biology and medical research.

Auvinen's work appears regularly in scientific venues such as bioRxiv (Cold Spring Harbor Laboratory), Research Square, BMC Genomics, Scientific Reports, and PLoS ONE.

Among recent publications, notable papers include:

  • Relationships of gut microbiota, short-chain fatty acids, inflammation, and the gut barrier in Parkinson's disease (2021, Molecular Neurodegeneration)
  • Bacterial Butyrate in Parkinson's Disease Is Linked to Epigenetic Changes and Depressive Symptoms (2022, Movement Disorders)
  • Retracted: Gut Microbiome Signatures of Risk and Prodromal Markers of Parkinson Disease (2020, Annals of Neurology)
  • Gut Microbiome Signatures of Risk and Prodromal Markers of Parkinson Disease (2021, Annals of Neurology)
  • Skin Microbiome in Cutaneous T-Cell Lymphoma by 16S and Whole-Genome Shotgun Sequencing (2020, Journal of Investigative Dermatology)

Best Publications

  • Gut microbiota are related to Parkinson's disease and clinical phenotype.

    Filip Scheperjans Md;BA Velma Aho MSc;Pedro A. B. Pereira;Kaisa Koskinen

  • Environmental biodiversity, human microbiota, and allergy are interrelated

    Ilkka Hanski;Leena von Hertzen;Nanna Fyhrquist;Kaisa Koskinen

  • Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human- mucus binding protein

    Matti Kankainen;Lars Paulin;Soile Tynkkynen;Ingemar von Ossowski

  • Bacterial diversity at different stages of the composting process

    Pasi Partanen;Jenni Hultman;Lars Paulin;Petri Auvinen

  • Gene expression in human NAFLD.

    Dario Greco;Anna Kotronen;Jukka Westerbacka;Oscar Puig

  • Relationships of gut microbiota, short-chain fatty acids, inflammation, and the gut barrier in Parkinson's disease.

    Velma T Aho;Madelyn Crawford Houser;Pedro Ab Pereira;Jianjun Chang

  • Gut microbiota in Parkinson's disease: Temporal stability and relations to disease progression.

    Velma T.E. Aho;Pedro A.B. Pereira;Sari Voutilainen;Lars Paulin

  • A distinct picornavirus group identified by sequence analysis.

    Timo Hyypia;Christine Horsnell;Marita Maaronen;Mahboob Khan

  • Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch

    Jarkko Salojärvi;Olli Pekka Smolander;Kaisa Nieminen;Sitaram Rajaraman

  • Green areas around homes reduce atopic sensitization in children.

    L. Ruokolainen;L. von Hertzen;N. Fyhrquist;T. Laatikainen;T. Laatikainen

  • Rab8 promotes polarized membrane transport through reorganization of actin and microtubules in fibroblasts.

    Johan Peränen;Petri Auvinen;Hilkka Virta;Roger Wepf

  • Biogenesis of the Semliki Forest Virus RNA Replication Complex

    Pekka Kujala;Anne Ikäheimonen;Neda Ehsani;Helena Vihinen

  • Endosome dynamics regulated by a Rho protein

    Carol Murphy;Rainer Saffrich;Maika Grummt;Hélèna Gournier

  • Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert

    Mikael Brosché;Basia Vinocur;Edward R Alatalo;Airi Lamminmäki

  • Polymerase chain reaction for human picornaviruses.

    Timo Hyypiä;Petri Auvinen;Marita Maaronen

  • Are data from different gene expression microarray platforms comparable

    Anna-Kaarina Järvinen;Sampsa Hautaniemi;Henrik Edgren;Henrik Edgren;Petri Auvinen

  • Notum produced by Paneth cells attenuates regeneration of aged intestinal epithelium

    Nalle Pentinmikko;Sharif Iqbal;Miyeko Mana;Simon Andersson

  • Analysis of fungal flora in indoor dust by ribosomal DNA sequence analysis, quantitative PCR, and culture.

    Miia Pitkäranta;T Meklin;A Hyvärinen;Lars Paulin

  • Identification of a novel function of the alphavirus capping apparatus. RNA 5'-triphosphatase activity of Nsp2.

    Lidia Vasiljeva;Andres Merits;Petri Auvinen;Leevi Kääriäinen

  • The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera

    Virpi Ahola;Rainer Lehtonen;Panu Somervuo;Leena Salmela

  • CDC42 and Rac1 control different actin-dependent processes in the Drosophila wing disc epithelium.

    S. Eaton;P. Auvinen;Liqun Luo;Yuh Nung Jan

Frequent Co-Authors

Lars Paulin
Lars Paulin University of Helsinki
Tiina Laatikainen
Tiina Laatikainen Finnish Institute for Health and Welfare
Liisa Holm
Liisa Holm University of Helsinki
Harri Alenius
Harri Alenius Karolinska Institute
Ilkka Hanski
Ilkka Hanski University of Helsinki
Timo Hyypiä
Timo Hyypiä University of Turku
Tari Haahtela
Tari Haahtela University of Helsinki
Leevi Kääriäinen
Leevi Kääriäinen University of Helsinki
Eija Jokitalo
Eija Jokitalo University of Helsinki
Jari P. T. Valkonen
Jari P. T. Valkonen University of Helsinki

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