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D-Index & Metrics

Biology and Biochemistry

D-Index
85
Citations
172589
World Ranking
3046
National Ranking
1548

Overview

Pablo Tamayo is affiliated with the University of California, San Diego in the United States. Their research spans several areas within biochemistry, genetics, molecular biology, and medicine, with a significant focus on cancer biology and related molecular mechanisms.

The primary fields of study for Tamayo include:

  • Biochemistry, Genetics and Molecular Biology
  • Medicine

Within these fields, Tamayo's subfields of study cover:

  • Molecular Biology
  • Cancer Research
  • Oncology
  • Immunology
  • Cell Biology

The main topics of research pursued involve:

  • Cancer Genomics and Diagnostics
  • Prostate Cancer Treatment and Research
  • RNA modifications and cancer
  • Hippo pathway signaling and YAP/TAZ
  • Cancer Cells and Metastasis
  • Cancer-related molecular mechanisms research
  • Immune cells in cancer

Some of their recent publications include:

  • "An expanded universe of cancer targets," 2021, Cell
  • "HPV E2, E4, E5 drive alternative carcinogenic pathways in HPV positive cancers," 2020, Oncogene
  • "Cannabinoids Promote Progression of HPV-Positive Head and Neck Squamous Cell Carcinoma via p38 MAPK Activation," 2020, Clinical Cancer Research
  • "CHMP2A regulates tumor sensitivity to natural killer cell-mediated cytotoxicity," 2022, Nature Communications
  • "Functional Precision Medicine Identifies New Therapeutic Candidates for Medulloblastoma," 2020, Cancer Research

Frequent co-authors collaborating with Tamayo are:

  • Jill P. Mesirov
  • J. Silvio Gutkind
  • Huwate Yeerna
  • Timothy V. Pham
  • Adam M. Burgoyne

Tamayo often publishes in the following venues:

  • Cancer Research
  • Journal of Clinical Oncology
  • bioRxiv (Cold Spring Harbor Laboratory)
  • Zenodo (CERN European Organization for Nuclear Research)
  • Nature Communications

Best Publications

  • Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles

    Aravind Subramanian;Pablo Tamayo;Vamsi K. Mootha;Sayan Mukherjee

  • Molecular classification of cancer: class discovery and class prediction by gene expression monitoring.

    T. R. Golub;T. R. Golub;D. K. Slonim;P. Tamayo;C. Huard

  • PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes

    Vamsi K Mootha;Cecilia M Lindgren;Cecilia M Lindgren;Karl-Fredrik Eriksson;Aravind Subramanian

  • The Molecular Signatures Database Hallmark Gene Set Collection

    Arthur Liberzon;Chet Birger;Helga Thorvaldsdóttir;Mahmoud Ghandi

  • Integrated Genomic Analysis Identifies Clinically Relevant Subtypes of Glioblastoma Characterized by Abnormalities in PDGFRA, IDH1, EGFR, and NF1

    Roel G. W. Verhaak;Katherine A. Hoadley;Elizabeth Purdom;Victoria Wang

  • Molecular signatures database (MSigDB) 3.0

    Arthur Liberzon;Aravind Subramanian;Reid Pinchback;Helga Thorvaldsdóttir

  • Interpreting patterns of gene expression with self-organizing maps: Methods and application to hematopoietic differentiation

    Pablo Tamayo;Donna Slonim;Jill Mesirov;Qing Zhu

  • Systematic RNA interference reveals that oncogenic KRAS-driven cancers require TBK1

    David A. Barbie;Pablo Tamayo;Jesse S. Boehm;So Young Kim

  • Gene expression correlates of clinical prostate cancer behavior.

    Dinesh Singh;Phillip G. Febbo;Phillip G. Febbo;Kenneth Ross;Donald G. Jackson

  • Diffuse large B-cell lymphoma outcome prediction by gene-expression profiling and supervised machine learning

    Margaret A. Shipp;Ken N. Ross;Pablo Tamayo;Andrew P. Weng

  • Prediction of central nervous system embryonal tumour outcome based on gene expression

    Scott L. Pomeroy;Pablo Tamayo;Michelle Gaasenbeek;Lisa M. Sturla

  • Multiclass cancer diagnosis using tumor gene expression signatures

    Sridhar Ramaswamy;Pablo Tamayo;Ryan Rifkin;Sayan Mukherjee

  • Metagenes and molecular pattern discovery using matrix factorization.

    Jean-Philippe Brunet;Pablo Tamayo;Todd R. Golub;Jill P. Mesirov

  • GenePattern 2.0.

    Michael Reich;Ted Liefeld;Joshua Gould;Jim Lerner

  • Consensus Clustering: A Resampling-Based Method for Class Discovery and Visualization of Gene Expression Microarray Data

    Stefano Monti;Pablo Tamayo;Jill Mesirov;Todd Golub

  • GSEA-P

    Aravind Subramanian;Heidi Kuehn;Joshua Gould;Pablo Tamayo

  • Dependency of a therapy-resistant state of cancer cells on a lipid peroxidase pathway

    Vasanthi S. Viswanathan;Matthew J. Ryan;Harshil D. Dhruv;Shubhroz Gill

  • Gene expression-based classification of malignant gliomas correlates better with survival than histological classification.

    Catherine L. Nutt;D. R. Mani;Rebecca A. Betensky;Pablo Tamayo

  • Identification of RPS14 as a 5q - syndrome gene by RNA interference screen

    Benjamin L. Ebert;Jennifer Pretz;Jocelyn Bosco;Cindy Y. Chang

  • SOX2 is an amplified lineage-survival oncogene in lung and esophageal squamous cell carcinomas

    Adam J. Bass;Adam J. Bass;Hideo Watanabe;Hideo Watanabe;Craig H. Mermel;Craig H. Mermel;Soyoung Yu

Frequent Co-Authors

Jill P. Mesirov
Jill P. Mesirov University of California, San Diego
Todd R. Golub
Todd R. Golub Harvard University
William C. Hahn
William C. Hahn Dana-Farber Cancer Institute
Matthew Meyerson
Matthew Meyerson Harvard University
Scott L. Pomeroy
Scott L. Pomeroy Boston Children's Hospital
Jesse S. Boehm
Jesse S. Boehm Broad Institute
David E. Root
David E. Root Broad Institute
Levi A. Garraway
Levi A. Garraway Roche (United States)
Stuart L. Schreiber
Stuart L. Schreiber Harvard University
Eric S. Lander
Eric S. Lander Broad Institute

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