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Devin Coleman-Derr

Devin Coleman-Derr

University of California, Berkeley
United States

Overview

What is he best known for?

The fields of study he is best known for:

Gene
DNA
Genome

Genetics, Ecology, Phylogenetics, Botany and Soil microbiology are his primary areas of study. Genetics is represented through his Histone methylation, DNA methylation, RNA-Directed DNA Methylation, Genome and Genomics research. His Phylogenetics research includes themes of Microbiome, Microbial ecology, Actinobacteria, Poaceae and Computational biology.

His Botany research is multidisciplinary, incorporating perspectives in Biodiversity, Rhizosphere, Soil water and Abiotic component. Devin Coleman-Derr has researched Rhizosphere in several fields, including Agave, Symbiosis, Abiotic stress, Phyllosphere and Biogeography. His research integrates issues of Phenotypic plasticity, Arabidopsis, Boechera stricta, Phenology and Drought tolerance in his study of Soil microbiology.

His most cited work include:

The Arabidopsis Nucleosome Remodeler DDM1 Allows DNA Methyltransferases to Access H1-Containing Heterochromatin (619 citations)
Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks (450 citations)
OrthoVenn: a web server for genome wide comparison and annotation of orthologous clusters across multiple species (365 citations)

What are the main themes of his work throughout his whole career to date?

His primary areas of study are Microbiome, Genetics, Ecology, Rhizosphere and Genome. His research in Microbiome intersects with topics in Relative species abundance, Drought stress, Host, Root microbiome and Actinobacteria. His work carried out in the field of Ecology brings together such families of science as Microbial population biology, Phylogenetics, Microbial ecology, Abiotic stress and Drought tolerance.

His Rhizosphere study combines topics in areas such as Botany, Growing season, Abiotic component and Soil microbiology. His Botany study incorporates themes from Phyllosphere and Arabidopsis. His Soil microbiology study combines topics from a wide range of disciplines, such as Biodiversity and Symbiosis.

He most often published in these fields:

Microbiome (66.67%)
Genetics (54.32%)
Ecology (56.79%)

What were the highlights of his more recent work (between 2018-2021)?

Microbiome (66.67%)
Rhizosphere (53.09%)
Ecology (56.79%)

In recent papers he was focusing on the following fields of study:

His scientific interests lie mostly in Microbiome, Rhizosphere, Ecology, Root microbiome and Host. His Microbiome research incorporates themes from Molecular network and Alpha diversity. His Rhizosphere study deals with the bigger picture of Genetics.

Ecology is a component of his Soil microbiology and Tillage studies. The study incorporates disciplines such as Agriculture, Drought stress, Abiotic stress and Actinobacteria in addition to Root microbiome. Devin Coleman-Derr has included themes like 16S ribosomal RNA, Genotype and Heritability in his Host study.

Between 2018 and 2021, his most popular works were:

Strong succession in arbuscular mycorrhizal fungal communities. (36 citations)
Strong succession in arbuscular mycorrhizal fungal communities. (36 citations)
Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic responses. (32 citations)

In his most recent research, the most cited papers focused on:

Gene
DNA
Genome

Devin Coleman-Derr mainly focuses on Ecology, Seedling, Soil microbiology, Sorghum and Symbiosis. He does research in Ecology, focusing on Host specifically. His Host research integrates issues from Abundance, Drought stress, Plant species and Root microbiome.

His biological study spans a wide range of topics, including Nestedness, Rhizosphere and Ecological succession. His studies deal with areas such as Biodiversity, Ecosystem and Mycobiome as well as Soil microbiology. Devin Coleman-Derr has researched Sorghum in several fields, including Photosynthesis, Field experiment, RNA-Seq and Crop yield.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

The Arabidopsis Nucleosome Remodeler DDM1 Allows DNA Methyltransferases to Access H1-Containing Heterochromatin

Assaf Zemach;M. Yvonne Kim;Ping Hung Hsieh;Devin Coleman-Derr.
Cell (2013)

784 Citations

Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks

Daniel Zilberman;Devin Coleman-Derr;Tracy Ballinger;Tracy Ballinger;Steven Henikoff;Steven Henikoff.
Nature (2008)

600 Citations

Plant Compartment and Biogeography Affect Microbiome Composition in Cultivated and Native Agave Species

Devin Coleman‐Derr;Devin Coleman‐Derr;Damaris Desgarennes;Citlali Fonseca‐Garcia;Stephen Gross.
New Phytologist (2016)

482 Citations

OrthoVenn: a web server for genome wide comparison and annotation of orthologous clusters across multiple species

Yi Wang;Devin Coleman-Derr;Guoping Chen;Yong Qiang Gu.
Nucleic Acids Research (2015)

448 Citations

Deposition of histone variant H2A.Z within gene bodies regulates responsive genes

Devin Coleman-Derr;Daniel Zilberman.
PLOS Genetics (2012)

303 Citations

Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria

Ling Xu;Dan Naylor;Dan Naylor;Zhaobin Dong;Zhaobin Dong;Tuesday Simmons;Tuesday Simmons.
Proceedings of the National Academy of Sciences of the United States of America (2018)

274 Citations

Drought and host selection influence bacterial community dynamics in the grass root microbiome.

Dan Naylor;Stephanie DeGraaf;Elizabeth Purdom;Devin Coleman-Derr.
The ISME Journal (2017)

243 Citations

Drought Stress and Root-Associated Bacterial Communities.

Dan Naylor;Devin Coleman-Derr;Devin Coleman-Derr.
Frontiers in Plant Science (2018)

227 Citations

Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative.

Maggie R. Wagner;Derek S. Lundberg;Devin Coleman-Derr;Susannah G. Tringe.
Ecology Letters (2014)

214 Citations

Genome comparisons reveal a dominant mechanism of chromosome number reduction in grasses and accelerated genome evolution in Triticeae

M. C. Luo;K. R. Deal;E. D. Akhunov;E. D. Akhunov;A. R. Akhunova;A. R. Akhunova.
Proceedings of the National Academy of Sciences of the United States of America (2009)

212 Citations

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