World's Best Scientists 2026 revealed!

D-Index & Metrics

Biology and Biochemistry

D-Index
61
Citations
15678
World Ranking
11226
National Ranking
4860

Overview

John P. Vogel is affiliated with the University of California, Berkeley in the United States. Their research primarily spans the fields of Agricultural and Biological Sciences as well as Biochemistry, Genetics and Molecular Biology, with a particular focus on Plant Science and Molecular Biology.

Their recent scholarly work includes the following publications:

  • "Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities," 2022, published in Nature Communications
  • "Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics," 2020, published in Nature Communications
  • "Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors," 2020, published in Nature Communications
  • "Plant Pan-Genomics Comes of Age," 2021, published in Annual Review of Plant Biology
  • "JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom," 2023, published in Nucleic Acids Research

The frequent co-authors collaborating with Vogel include:

  • Richard Sibout
  • Debbie Laudencia-Chingcuanco
  • Trent R. Northen
  • Pilar Catalán
  • Devin Coleman-Derr

Among the preferred venues where Vogel frequently publishes are:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • New Phytologist
  • Nature Communications
  • The Plant Journal
  • Frontiers in Plant Science

Their research encompasses several subfields including Plant Science, Molecular Biology, Ecology, Evolution, Behavior and Systematics, Agronomy and Crop Science, and Genetics.

Main research topics include:

  • Plant Molecular Biology Research
  • Chromosomal and Genetic Variations
  • Plant Taxonomy and Phylogenetics
  • Genomics and Phylogenetic Studies
  • Bioenergy crop production and management
  • Mycorrhizal Fungi and Plant Interactions
  • Plant Parasitism and Resistance

Best Publications

  • Genome sequencing and analysis of the model grass Brachypodium distachyon

    John P. Vogel;David F. Garvin;Todd C. Mockler;Jeremy Schmutz

  • Unique aspects of the grass cell wall

    John Vogel

  • Loss of a Callose Synthase Results in Salicylic Acid-Dependent Disease Resistance

    Marc T. Nishimura;Mónica Stein;Bi-Huei Hou;John P. Vogel

  • Conserved requirement for a plant host cell protein in powdery mildew pathogenesis.

    C. Consonni;M. E. Humphry;H. A. Hartmann;M. Livaja

  • PMR6, a Pectate Lyase–Like Gene Required for Powdery Mildew Susceptibility in Arabidopsis

    John P. Vogel;Theodore K. Raab;Celine Schiff;Shauna C. Somerville

  • Recessive and dominant mutations in the ethylene biosynthetic gene ACS5 of Arabidopsis confer cytokinin insensitivity and ethylene overproduction, respectively

    John P. Vogel;Keith E. Woeste;Athanasios Theologis;Joseph J. Kieber

  • Resistance to Pseudomonas syringae conferred by an Arabidopsis thaliana coronatine‐insensitive (coi1) mutation occurs through two distinct mechanisms

    Andrew P. Kloek;Michelle L. Verbsky;Shashi B. Sharma;James E. Schoelz

  • Isolation and characterization of powdery mildew-resistant Arabidopsis mutants.

    John Vogel;Shauna Somerville

  • High-efficiency Agrobacterium-mediated transformation of Brachypodium distachyon inbred line Bd21-3.

    John Vogel;Theresa Hill

  • Mutations in PMR5 result in powdery mildew resistance and altered cell wall composition

    John P. Vogel;Theodore K. Raab;Chris R. Somerville;Chris R. Somerville;Shauna C. Somerville

  • Brachypodium as a Model for the Grasses: Today and the Future

    Jelena Brkljacic;Erich Grotewold;Randy Scholl;Todd C. Mockler

  • Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics

    Cheng Gao;Liliam Montoya;Ling Xu;Ling Xu;Mary Madera

  • Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure

    Sean P. Gordon;Bruno Contreras-Moreira;Daniel P. Woods;Daniel P. Woods;David L. Des Marais;David L. Des Marais

  • GLO-Roots: an imaging platform enabling multidimensional characterization of soil-grown root systems

    Rubén Rellán-Álvarez;Guillaume Lobet;Heike Lindner;Pierre-Luc Pradier

  • Adsorption-hemagglutination test for influenza virus in monkey kidney tissue culture.

    John Vogel;Alexis Shelokov

  • Overexpression of the maize Corngrass1 microRNA prevents flowering, improves digestibility, and increases starch content of switchgrass

    George S. Chuck;Christian Tobias;Lan Sun;Florian Kraemer

  • Mobile MUTE specifies subsidiary cells to build physiologically improved grass stomata

    Michael T. Raissig;Juliana L. Matos;M. Ximena Anleu Gil;Ari Kornfeld

  • Agrobacterium -mediated transformation and inbred line development in the model grass Brachypodium distachyon

    John P. Vogel;David F. Garvin;Oymon M. Leong;Daniel M. Hayden

  • Development of Genetic and Genomic Research Resources for Brachypodium distachyon, a New Model System for Grass Crop Research

    David F. Garvin;Yong-Qiang Gu;Robert Hasterok;Samuel P. Hazen

  • Multidimensional mapping of root responses to soil environmental cues using a luminescence-based imaging system

    Rubén Rellán-Álvarez;Guillaume Lobet;Heike Lindner;Pierre-Luc M Pradier

Frequent Co-Authors

David F. Garvin
David F. Garvin Agricultural Research Service
Trent R. Northen
Trent R. Northen Lawrence Berkeley National Laboratory
Shauna Somerville
Shauna Somerville University of California, Berkeley
Gerard R. Lazo
Gerard R. Lazo Agricultural Research Service
Todd C. Mockler
Todd C. Mockler Donald Danforth Plant Science Center
Devin Coleman-Derr
Devin Coleman-Derr University of California, Berkeley
Michelle Watt
Michelle Watt University of Melbourne
Frank M. You
Frank M. You Agriculture and Agriculture-Food Canada
Olin D. Anderson
Olin D. Anderson United States Department of Agriculture
Axel Visel
Axel Visel Lawrence Berkeley National Laboratory

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