David W. Ussery mostly deals with Genetics, Genome, Gene, Genomics and Comparative genomics. His research ties Computational biology and Genetics together. His Genome study combines topics in areas such as Phylogenetics, Multilocus sequence typing and DNA sequencing.
His work on Escherichia coli, Chromatin and Promoter as part of general Gene research is frequently linked to Azorhizobium caulinodans, thereby connecting diverse disciplines of science. His Genomics research is multidisciplinary, incorporating elements of Evolutionary biology, Data science and Metagenomics. His Gene prediction research is multidisciplinary, incorporating perspectives in Minimal genome and Intron.
His primary scientific interests are in Genome, Genetics, Computational biology, Gene and Comparative genomics. His research brings together the fields of Phylogenetic tree and Genome. His Genetics study frequently draws connections to other fields, such as Microbiology.
David W. Ussery has researched Computational biology in several fields, including Bioinformatics, RNA, Nanopore sequencing, Taxonomy and Pan-genome. Multilocus sequence typing, Virulence, Gene family, Transcription and Sequence analysis are the primary areas of interest in his Gene study. The study incorporates disciplines such as Evolutionary biology and Metagenomics in addition to Genomics.
The scientist’s investigation covers issues in Genome, Computational biology, Gene, Genetics and Nanopore sequencing. The concepts of his Genome study are interwoven with issues in Enterococcus faecium, Virology and Phylogenetic tree. His Computational biology study combines topics from a wide range of disciplines, such as Gut flora, RNA, Transcriptome, Virus classification and GenBank.
His study on Protein family, Strain and Metagenomics is often connected to Clostridium difficile toxin A as part of broader study in Gene. His is doing research in Plasmid, Comparative genomics, Pseudomonas chlororaphis, Phylogenetics and Phylogenetic diversity, both of which are found in Genetics. The Nanopore sequencing study combines topics in areas such as Mutation, Glioma, Temozolomide and 2019-20 coronavirus outbreak.
His primary areas of study are Genome, Computational biology, Genetics, Phylogenetic tree and RNA. His work carried out in the field of Genome brings together such families of science as Lineage, Pseudomonas fluorescens, Pregnancy, Pseudomonas putida and Pseudomonas. His work deals with themes such as GenBank, Taxonomy and Genomics, which intersect with Computational biology.
The study of Genetics is intertwined with the study of Serotype in a number of ways. His Phylogenetic tree study incorporates themes from Virology, Genotype and Bioinformatics. His study on RNA also encompasses disciplines like
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RNAmmer: consistent and rapid annotation of ribosomal RNA genes
Karin Lagesen;Peter Fischer Hallin;Einar Andreas Rødland;Hans Henrik Stærfeldt.
Nucleic Acids Research (2007)
The genome sequence of Schizosaccharomyces pombe
V. Wood;R. Gwilliam;M.A. Rajandream;M. Lyne.
Nature (2002)
DNA Structure and Function
Richard R. Sinden;Christopher E. Pearson;Vladimir N. Potaman;David W. Ussery.
(2008)
The minimum information about a genome sequence (MIGS) specification.
Dawn Field;George Garrity;Tanya Gray;Norman Morrison.
Nature Biotechnology (2008)
Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88
.
Nature Biotechnology (2007)
Multilocus Sequence Typing of Total-Genome-Sequenced Bacteria
Mette V. Larsen;Salvatore Cosentino;Simon Rasmussen;Carsten Friis.
Journal of Clinical Microbiology (2012)
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes
H Bjørn Nielsen;Mathieu Almeida;Agnieszka Sierakowska Juncker;Simon Rasmussen.
Nature Biotechnology (2014)
Insights from 20 years of bacterial genome sequencing
Miriam L. Land;Loren Hauser;Se-Ran Jun;Intawat Nookaew.
Functional & Integrative Genomics (2015)
Comparison of 61 Sequenced Escherichia Coli Genomes
Oksana Lukjancenko;Trudy M. Wassenaar;David W. Ussery.
Microbial Ecology (2010)
The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium
Carsten Kröger;Shane C. Dillon;Andrew D. S. Cameron;Kai Papenfort.
Proceedings of the National Academy of Sciences of the United States of America (2012)
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