Joseph T. Wade

Best Publications

• The transcription factor Ifh1 is a key regulator of yeast ribosomal protein genes

  Joseph T. Wade;Daniel B. Hall;Kevin Struhl

  274
  Citations

• Pervasive transcription: illuminating the dark matter of bacterial transcriptomes

  Joseph T. Wade;David C. Grainger

  268
  Citations

• Leaderless Transcripts and Small Proteins Are Common Features of the Mycobacterial Translational Landscape.

  Scarlet S. Shell;Jing Wang;Pascal Lapierre;Mushtaq Mir

  254
  Citations

• The Transition between Transcriptional Initiation and Elongation in E. coli Is Highly Variable and Often Rate Limiting

  Nikos B. Reppas;Joseph T. Wade;George M. Church;Kevin Struhl

  252
  Citations

• An allosteric mechanism of Rho-dependent transcription termination

  Vitaly Epshtein;Dipak Dutta;Joseph Wade;Evgeny Nudler

  240
  Citations

• Comprehensive Mapping of the Escherichia coli Flagellar Regulatory Network

  Devon M. Fitzgerald;Richard P. Bonocora;Joseph T. Wade

  232
  Citations

• A 3′ External Transcribed Spacer in a tRNA Transcript Acts as a Sponge for Small RNAs to Prevent Transcriptional Noise

  David Lalaouna;Marie-Claude Carrier;Szabolcs Semsey;Jean-Simon Brouard

  228
  Citations

• Widespread Antisense Transcription in Escherichia coli

  James E. Dornenburg;Anne M. DeVita;Michael J. Palumbo;Joseph T. Wade;Joseph T. Wade

  227
  Citations

• Extensive functional overlap between sigma factors in Escherichia coli.

  Joseph T Wade;Daniel Castro Roa;David C Grainger;Douglas Hurd

  222
  Citations

• An HMG protein, Hmo1, associates with promoters of many ribosomal protein genes and throughout the rRNA gene locus in Saccharomyces cerevisiae.

  Daniel B. Hall;Joseph T. Wade;Kevin Struhl

  203
  Citations

• Genomic analysis of LexA binding reveals the permissive nature of the Escherichia coli genome and identifies unconventional target sites.

  Joseph T. Wade;Nikos B. Reppas;George M. Church;Kevin Struhl

  193
  Citations

• Widespread suppression of intragenic transcription initiation by H-NS

  Shivani S. Singh;Navjot Singh;Richard P. Bonocora;Devon M. Fitzgerald

  184
  Citations

• RegulonDB 11.0: Comprehensive high-throughput datasets on transcriptional regulation in Escherichia coli K-12

  Unknown

  164
  Citations

• The transition from transcriptional initiation to elongation

  Joseph T Wade;Kevin Struhl

  153
  Citations

• Redefining fundamental concepts of transcription initiation in bacteria.

  Citlalli Mejía-Almonte;Stephen J W Busby;Joseph T Wade;Jacques van Helden;Jacques van Helden

  151
  Citations

• Coordinated regulation of acid resistance in Escherichia coli.

  Patricia Aquino;Brent Honda;Suma Jaini;Anna Lyubetskaya

  143
  Citations

• Genomic analysis of protein-DNA interactions in bacteria: insights into transcription and chromosome organization.

  Joseph T. Wade;Kevin Struhl;Stephen J. W. Busby;David C. Grainger

  135
  Citations

• Regulatory roles of Escherichia coli 5' UTR and ORF-internal RNAs detected by 3' end mapping.

  Philip P Adams;Gabriele Baniulyte;Caroline Esnault;Kavya Chegireddy

  126
  Citations

• Genomic studies with Escherichia coli MelR protein: applications of chromatin immunoprecipitation and microarrays.

  David C. Grainger;Timothy W. Overton;Nikos Reppas;Joseph T. Wade

  117
  Citations

• Genome-Wide Transcriptional Response to Varying RpoS Levels in Escherichia coli K-12.

  Garrett T. Wong;Richard P. Bonocora;Alicia N. Schep;Suzannah M. Beeler

  102
  Citations