D-Index & Metrics Best Publications

D-Index & Metrics

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Chemistry D-index 50 Citations 14,579 106 World Ranking 8668 National Ranking 2518

Research.com Recognitions

Awards & Achievements

2008 - Fellow of the American Association for the Advancement of Science (AAAS)

2007 - Fellow of American Physical Society (APS) Citation For outstanding contributions to the field of biophysics are in developing novel computational methods that have substantially expanded ones ability to simulate, model and refine flexible biomolecular systems based on experimental data at low to intermediate resolutions He is one of the pioneers and leading experts in the field


What is he best known for?

The fields of study he is best known for:

  • Quantum mechanics
  • Enzyme
  • Gene

His main research concerns Molecular dynamics, Crystallography, Normal mode, Nanotechnology and ATPase. The Molecular dynamics study combines topics in areas such as Chemical physics, Nanotube membrane, Conformational change and Physiological condition. His Crystallography research is multidisciplinary, relying on both Protein structure, Biophysics, Bilayer and Protein folding.

The Carbon nanotube research Jianpeng Ma does as part of his general Nanotechnology study is frequently linked to other disciplines of science, such as Extramural and Protonation, therefore creating a link between diverse domains of science. In general Carbon nanotube, his work in Optical properties of carbon nanotubes is often linked to Micelle linking many areas of study. His ATPase research includes elements of Molecular motor, Stereochemistry, ATP synthase and Nucleotide.

His most cited work include:

  • CHARMM: the biomolecular simulation program. (4881 citations)
  • Band gap fluorescence from individual single-walled carbon nanotubes. (2981 citations)
  • Band gap fluorescence from individual single-walled carbon nanotubes. (2981 citations)

What are the main themes of his work throughout his whole career to date?

The scientist’s investigation covers issues in Crystallography, Protein structure, Normal mode, Molecular dynamics and Algorithm. The various areas that Jianpeng Ma examines in his Crystallography study include Biophysics, Cryo-electron microscopy, Lipid bilayer fusion and Protein folding. His Protein structure study also includes fields such as

  • Transmembrane domain which is related to area like ATP-binding cassette transporter,
  • Biological system together with Computational chemistry and Feature.

His study looks at the relationship between Normal mode and fields such as Resolution, as well as how they intersect with chemical problems. His work is dedicated to discovering how Molecular dynamics, Stereochemistry are connected with Molecular motor, Protein subunit and Binding site and other disciplines. His research investigates the link between Algorithm and topics such as Protein structure prediction that cross with problems in Dihedral angle.

He most often published in these fields:

  • Crystallography (48.19%)
  • Protein structure (36.79%)
  • Normal mode (29.53%)

What were the highlights of his more recent work (between 2017-2021)?

  • Algorithm (33.68%)
  • Protein structure prediction (20.21%)
  • Protein folding (20.73%)

In recent papers he was focusing on the following fields of study:

His scientific interests lie mostly in Algorithm, Protein structure prediction, Protein folding, Protein structure and Dihedral angle. He has included themes like Artificial neural network, Structure and Protein secondary structure in his Algorithm study. The study incorporates disciplines such as Recurrent neural network and Deep learning, Inference, Artificial intelligence in addition to Protein secondary structure.

Jianpeng Ma connects Protein folding with Folding in his research. His research links Model selection with Protein structure. His biological study deals with issues like Correctness, which deal with fields such as Function.

Between 2017 and 2021, his most popular works were:

  • Atomistic simulations indicate the functional loop-to-coiled-coil transition in influenza hemagglutinin is not downhill (7 citations)
  • Atomistic simulations indicate the functional loop-to-coiled-coil transition in influenza hemagglutinin is not downhill (7 citations)
  • Three classes of response elements for human PRC2 and MLL1/2-Trithorax complexes. (6 citations)

In his most recent research, the most cited papers focused on:

  • Quantum mechanics
  • Enzyme
  • Gene

His primary scientific interests are in Protein structure prediction, Algorithm, Artificial neural network, Inference and Deep learning. His work carried out in the field of Protein structure prediction brings together such families of science as Geometry and A protein. The Algorithm study combines topics in areas such as Function, Protein structure modeling and Protein Data Bank.

Jianpeng Ma interconnects Protein structure and Protein secondary structure in the investigation of issues within Artificial neural network.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

CHARMM: the biomolecular simulation program.

B. R. Brooks;C. L. Brooks;A. D. Mackerell;L. Nilsson.
Journal of Computational Chemistry (2009)

5859 Citations

Band gap fluorescence from individual single-walled carbon nanotubes.

Michael J. O'Connell;Sergei M. Bachilo;Chad B. Huffman;Valerie C. Moore.
Science (2002)

4327 Citations

Genome maps 7. The human transcript map. Wall chart.

G. D. Schuler;M. S. Boguski;T. J. Hudson;L. Hui.
Science (1996)

1215 Citations

Usefulness and Limitations of Normal Mode Analysis in Modeling Dynamics of Biomolecular Complexes

Jianpeng Ma;Jianpeng Ma.
Structure (2005)

615 Citations

A dynamic model for the allosteric mechanism of GroEL.

Jianpeng Ma;Paul B Sigler;Zhaohui Xu;Martin Karplus.
Journal of Molecular Biology (2000)

330 Citations

Conformational transition of amyloid β-peptide

Yechun Xu;Jianhua Shen;Xiaomin Luo;Weiliang Zhu.
Proceedings of the National Academy of Sciences of the United States of America (2005)

307 Citations

The allosteric mechanism of the chaperonin GroEL: A dynamic analysis

Jianpeng Ma;Martin Karplus.
Proceedings of the National Academy of Sciences of the United States of America (1998)

250 Citations

How to describe protein motion without amino acid sequence and atomic coordinates.

Dengming Ming;Yifei Kong;Maxime A. Lambert;Zhong Huang.
Proceedings of the National Academy of Sciences of the United States of America (2002)

243 Citations

Helical ice-sheets inside carbon nanotubes in the physiological condition

William H Noon;Kevin D Ausman;Richard E Smalley;Jianpeng Ma;Jianpeng Ma.
Chemical Physics Letters (2002)

226 Citations

Structure of the full-length Shaker potassium channel Kv1.2 by normal-mode-based X-ray crystallographic refinement

Xiaorui Chen;Qinghua Wang;Fengyun Ni;Jianpeng Ma.
Proceedings of the National Academy of Sciences of the United States of America (2010)

223 Citations

Best Scientists Citing Jianpeng Ma

Alexander D. MacKerell

Alexander D. MacKerell

University of Maryland, Baltimore

Publications: 147

Wonpil Im

Wonpil Im

Lehigh University

Publications: 100

Michael S. Strano

Michael S. Strano


Publications: 87

Bernard R. Brooks

Bernard R. Brooks

National Institutes of Health

Publications: 86

Charles L. Brooks

Charles L. Brooks

University of Michigan–Ann Arbor

Publications: 75

Martin Karplus

Martin Karplus

Harvard University

Publications: 74

Benoît Roux

Benoît Roux

University of Chicago

Publications: 71

Markus Meuwly

Markus Meuwly

University of Basel

Publications: 70

Amedeo Caflisch

Amedeo Caflisch

University of Zurich

Publications: 65

Qiang Cui

Qiang Cui

Boston University

Publications: 64

Ruth Nussinov

Ruth Nussinov

U.S. Department of Health and Human Services

Publications: 54

Ivet Bahar

Ivet Bahar

University of Pittsburgh

Publications: 53

Daniel A. Heller

Daniel A. Heller

Memorial Sloan Kettering Cancer Center

Publications: 53

Michael Feig

Michael Feig

Michigan State University

Publications: 49

Naotoshi Nakashima

Naotoshi Nakashima

Kyushu University

Publications: 47

Gregg T. Beckham

Gregg T. Beckham

National Renewable Energy Laboratory

Publications: 46

Profile was last updated on December 6th, 2021.
Research.com Ranking is based on data retrieved from the Microsoft Academic Graph (MAG).
The ranking d-index is inferred from publications deemed to belong to the considered discipline.

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