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Genetics

D-Index
63
Citations
48038
World Ranking
2821
National Ranking
1234

Overview

Haiyuan Yu is affiliated with Cornell University in the United States and has a substantial publication record in the fields of biochemistry, genetics, and molecular biology. Their work spans a variety of subfields including molecular biology, materials chemistry, genetics, neurology, and aerospace engineering.

Their research covers numerous specialized topics, among which are:

  • Bioinformatics and genomic networks
  • High-temperature coating behaviors
  • Genomics and chromatin dynamics
  • RNA research and splicing
  • RNA and protein synthesis mechanisms
  • Computational drug discovery methods
  • Protein structure and dynamics

Haiyuan Yu has contributed to many publications, frequently appearing in the following venues:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Nature Biotechnology
  • Surface and Coatings Technology
  • Nature Communications
  • Physical Review A

The scientist has coauthored multiple papers with several researchers, including:

  • Shayne D. Wierbowski
  • Alden King-Yung Leung
  • Robert Fragoza
  • John T. Lis
  • Kumar Yugandhar

Among the recent papers authored or coauthored by Haiyuan Yu are:

  • "A comprehensive SARS-CoV-2-human protein-protein interactome reveals COVID-19 pathobiology and potential host therapeutic targets" (2022, Nature Biotechnology)
  • "In-depth and 3-dimensional exploration of the budding yeast phosphoproteome" (2021, EMBO Reports)
  • "Network medicine links SARS-CoV-2/COVID-19 infection to brain microvascular injury and neuroinflammation in dementia-like cognitive impairment" (2021, Alzheimer's Research & Therapy)
  • "SAAMBE-3D: Predicting Effect of Mutations on Protein-Protein Interactions" (2020, International Journal of Molecular Sciences)
  • "Loss of TMEM 106B and PGRN leads to severe lysosomal abnormalities and neurodegeneration in mice" (2020, EMBO Reports)

Best Publications

  • A global reference for human genetic variation.

    Adam Auton;Gonçalo R. Abecasis;David M. Altshuler;Richard M. Durbin

  • Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

    Nevan J. Krogan;Gerard Cagney;Gerard Cagney;Haiyuan Yu;Gouqing Zhong

  • A Map of the Interactome Network of the Metazoan C. elegans

    Siming Li;Christopher M. Armstrong;Nicolas Bertin;Hui Ge

  • High-Quality Binary Protein Interaction Map of the Yeast Interactome Network

    Haiyuan Yu;Pascal Braun;Muhammed A Yildirim;Irma Lemmens

  • A Bayesian networks approach for predicting protein-protein interactions from genomic data.

    Ronald Jansen;Haiyuan Yu;Dov Greenbaum;Yuval Kluger

  • Detecting overlapping protein complexes in protein-protein interaction networks

    Tamás Nepusz;Haiyuan Yu;Alberto Paccanaro

  • Genomic analysis of regulatory network dynamics reveals large topological changes

    Nicholas M. Luscombe;M. Madan Babu;Haiyuan Yu;Michael Snyder

  • The importance of bottlenecks in protein networks: correlation with gene essentiality and expression dynamics.

    Haiyuan Yu;Philip M Kim;Emmett Sprecher;Valery Trifonov

  • An empirical framework for binary interactome mapping

    Kavitha Venkatesan;Kavitha Venkatesan;Jean François Rual;Alexei Vazquez;Alexei Vazquez;Ulrich Stelzl

  • A global reference for human genetic variation

    Adam Auton;Gonçalo R. Abecasis;David M. Altshuler;Richard M. Durbin

  • Annotation Transfer Between Genomes: Protein–Protein Interologs and Protein–DNA Regulogs

    Haiyuan Yu;Nicholas M. Luscombe;Hao Xin Lu;Xiaowei Zhu

  • Biochemical and genetic analysis of the yeast proteome with a movable ORF collection

    Daniel M. Gelperin;Michael A. White;Martha L. Wilkinson;Yoshiko Kon

  • An experimentally derived confidence score for binary protein-protein interactions

    Pascal Braun;Murat Tasan;Matija Dreze;Matija Dreze;Miriam Barrios-Rodiles

  • HINT: High-quality protein interactomes and their applications in understanding human disease

    Jishnu Das;Haiyuan Yu

  • Three-dimensional reconstruction of protein networks provides insight into human genetic disease.

    Xiujuan Wang;Xiaomu Wei;Xiaomu Wei;Bram Thijssen;Jishnu Das

  • Divergence of transcription factor binding sites across related yeast species

    Anthony R. Borneman;Tara A. Gianoulis;Zhengdong D. Zhang;Haiyuan Yu

  • Integrative Annotation of Variants from 1092 Humans: Application to Cancer Genomics

    Ekta Khurana;Yao Fu;Vincenza Colonna;Vincenza Colonna;Xinmeng Jasmine Mu

  • Edgetic perturbation models of human inherited disorders.

    Quan Zhong;Nicolas Simonis;Qian -Ru Li;Benoît Charloteaux;Benoît Charloteaux

  • Genomic analysis of the hierarchical structure of regulatory networks

    Haiyuan Yu;Mark Gerstein

  • Genomic analysis of essentiality within protein networks.

    Haiyuan Yu;Dov Greenbaum;Hao Xin Lu;Xiaowei Zhu

Frequent Co-Authors

Mark Gerstein
Mark Gerstein Yale University
Marc Vidal
Marc Vidal Harvard University
Frederick P. Roth
Frederick P. Roth Lunenfeld-Tanenbaum Research Institute
David E. Hill
David E. Hill Harvard University
Steven M. Lipkin
Steven M. Lipkin Weill Cornell Medicine
Michael Snyder
Michael Snyder Stanford University
Marcus B. Smolka
Marcus B. Smolka Cornell University
Kasper Lage
Kasper Lage Harvard University
Tuuli Lappalainen
Tuuli Lappalainen Royal Institute of Technology
Peter D. Stenson
Peter D. Stenson Cardiff University

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